BLASTX nr result
ID: Cnidium21_contig00026977
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00026977 (313 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like... 89 4e-16 ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|2... 82 3e-14 ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloro... 82 4e-14 ref|XP_002868977.1| ribosomal protein L12 family protein [Arabid... 72 4e-11 emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera] 72 4e-11 >ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus] gi|449499867|ref|XP_004160938.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus] Length = 168 Score = 89.0 bits (219), Expect = 4e-16 Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 1/90 (1%) Frame = +3 Query: 36 SIASKIPSKTLSRLFLFTHKTPFTQTLCTLTKPSEAQTQKLERIADELLSFSKLEKYDYT 215 SIASK+P+K+L RL + ++L T+ +E +TQKLERIADELL +K+E++DY Sbjct: 3 SIASKLPAKSLVRLLTVAPRPLLVRSLSTV---AEERTQKLERIADELLDLTKIERHDYA 59 Query: 216 ILLRHKMGLNKYGPAVVGLQS-GTVSTGPA 302 IL R+KMGLNKYGPAV GL + G+ + G A Sbjct: 60 ILFRYKMGLNKYGPAVSGLSAPGSAAAGSA 89 >ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|222839078|gb|EEE77429.1| predicted protein [Populus trichocarpa] Length = 173 Score = 82.4 bits (202), Expect = 3e-14 Identities = 48/94 (51%), Positives = 60/94 (63%), Gaps = 4/94 (4%) Frame = +3 Query: 33 TSIASKIPSKTLSRLFLFTHKTPFTQTLCTL----TKPSEAQTQKLERIADELLSFSKLE 200 +SI + + SKTL R L PFT T+ + SE QTQKLERIAD LL +K+E Sbjct: 2 SSITTNLASKTLKRRLL-----PFTPKPITIISRSSSSSETQTQKLERIADVLLDLTKIE 56 Query: 201 KYDYTILLRHKMGLNKYGPAVVGLQSGTVSTGPA 302 ++DY IL RHKMGL +YGPAV SG + +GPA Sbjct: 57 RHDYAILFRHKMGLGRYGPAV----SGAILSGPA 86 >ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis vinifera] Length = 165 Score = 82.0 bits (201), Expect = 4e-14 Identities = 46/81 (56%), Positives = 56/81 (69%) Frame = +3 Query: 36 SIASKIPSKTLSRLFLFTHKTPFTQTLCTLTKPSEAQTQKLERIADELLSFSKLEKYDYT 215 SI ++IP KTL R F ++ LC+ + A TQKLERIADELL +KLE+YDY+ Sbjct: 3 SITTRIPYKTLVRPLFFAQ----SRNLCS----ASATTQKLERIADELLDLTKLERYDYS 54 Query: 216 ILLRHKMGLNKYGPAVVGLQS 278 IL R K+GLNKYGPAV GL S Sbjct: 55 ILFRLKLGLNKYGPAVSGLAS 75 >ref|XP_002868977.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp. lyrata] gi|297314813|gb|EFH45236.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp. lyrata] Length = 167 Score = 72.4 bits (176), Expect = 4e-11 Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 5/87 (5%) Frame = +3 Query: 57 SKTLSRLFLFTHKTPFTQTLCTLTKPSEAQTQKLERIADELLSFSKLEKYDYTILLRHKM 236 S++L L T T T+ LC + P EA+T+KLERIAD+LL+ +++E YDY+IL HK+ Sbjct: 10 SRSLGYLHRTTPLTTATRHLCAVASP-EARTKKLERIADDLLNLNRIELYDYSILFSHKL 68 Query: 237 GLNKYGPAVV-----GLQSGTVSTGPA 302 GLN+YG AV G SG+ T A Sbjct: 69 GLNRYGSAVAVAGSDGEASGSTETKTA 95 >emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera] Length = 615 Score = 72.4 bits (176), Expect = 4e-11 Identities = 37/58 (63%), Positives = 45/58 (77%) Frame = +3 Query: 105 TQTLCTLTKPSEAQTQKLERIADELLSFSKLEKYDYTILLRHKMGLNKYGPAVVGLQS 278 ++ LC+ + A TQKLERIADELL +KLE+YDY+IL R K+GLNKYGPAV GL S Sbjct: 472 SRNLCS----ASATTQKLERIADELLDLTKLERYDYSILFRLKLGLNKYGPAVSGLAS 525