BLASTX nr result
ID: Cnidium21_contig00026975
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00026975
(337 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27249.3| unnamed protein product [Vitis vinifera] 138 4e-31
ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi... 138 4e-31
ref|XP_002316102.1| predicted protein [Populus trichocarpa] gi|2... 132 4e-29
ref|XP_002512123.1| pentatricopeptide repeat-containing protein,... 126 2e-27
ref|XP_003607763.1| Pentatricopeptide repeat-containing protein ... 122 3e-26
>emb|CBI27249.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 138 bits (348), Expect = 4e-31
Identities = 68/112 (60%), Positives = 85/112 (75%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQN 180
GR VH G+KLG EDA +ALV MYAKC M+ DA +F+T+ +KDVI WNSI+SGY QN
Sbjct: 405 GRSVHCLGIKLGSEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQN 464
Query: 181 GHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
G+AYEAL+LF QMR ++ PDA+TLV+VLS CASV A G +LH ++IK G
Sbjct: 465 GYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAG 516
Score = 85.9 bits (211), Expect = 3e-15
Identities = 43/113 (38%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 GRLVHGFGLKLGLE-DANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQ 177
G+ VHG+ +K G + ++ + + L+ +Y KC + DA ++F +S D+++W +++ GYAQ
Sbjct: 304 GKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQ 363
Query: 178 NGHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
G+ EALKLF R +L P+ VT +VLS CA +L+ G ++H IK+G
Sbjct: 364 RGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG 416
Score = 77.8 bits (190), Expect = 8e-13
Identities = 42/112 (37%), Positives = 66/112 (58%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQN 180
GR +H +K+G D+ V + LV MYAKC +ED+ +F I +++V+ W S++ GY QN
Sbjct: 204 GRKLHCQIVKVGSPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQN 263
Query: 181 GHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
E L LF +MR + + TL ++++ C + ALH G +H + IK G
Sbjct: 264 DCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSG 315
>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein
VITISV_009460 [Vitis vinifera]
Length = 700
Score = 138 bits (348), Expect = 4e-31
Identities = 68/112 (60%), Positives = 85/112 (75%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQN 180
GR VH G+KLG EDA +ALV MYAKC M+ DA +F+T+ +KDVI WNSI+SGY QN
Sbjct: 358 GRSVHCLGIKLGSEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQN 417
Query: 181 GHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
G+AYEAL+LF QMR ++ PDA+TLV+VLS CASV A G +LH ++IK G
Sbjct: 418 GYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAG 469
Score = 85.9 bits (211), Expect = 3e-15
Identities = 43/113 (38%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 GRLVHGFGLKLGLE-DANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQ 177
G+ VHG+ +K G + ++ + + L+ +Y KC + DA ++F +S D+++W +++ GYAQ
Sbjct: 257 GKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQ 316
Query: 178 NGHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
G+ EALKLF R +L P+ VT +VLS CA +L+ G ++H IK+G
Sbjct: 317 RGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG 369
Score = 77.8 bits (190), Expect = 8e-13
Identities = 42/112 (37%), Positives = 66/112 (58%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQN 180
GR +H +K+G D+ V + LV MYAKC +ED+ +F I +++V+ W S++ GY QN
Sbjct: 157 GRKLHCQIVKVGSPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQN 216
Query: 181 GHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
E L LF +MR + + TL ++++ C + ALH G +H + IK G
Sbjct: 217 DCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSG 268
Score = 68.6 bits (166), Expect = 5e-10
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDANV--SSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYA 174
G +HG+ +K GL +V +AL+ YAKC E A +F + K+ ITW++++ GY
Sbjct: 458 GSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYG 517
Query: 175 QNGHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGY 306
G +L+LF M L P+ V T+LS C+ L G+
Sbjct: 518 IQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGW 561
>ref|XP_002316102.1| predicted protein [Populus trichocarpa] gi|222865142|gb|EEF02273.1|
predicted protein [Populus trichocarpa]
Length = 665
Score = 132 bits (331), Expect = 4e-29
Identities = 62/112 (55%), Positives = 86/112 (76%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQN 180
GR +HG +KLG D V+++LV YAKC M DA +F+TIS++DV+ WNSI+S ++QN
Sbjct: 323 GRSIHGLSIKLGSRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQN 382
Query: 181 GHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
G AYEAL+LF+QMR+ ++ PDAVTLV+VLS CAS+ AL G + HA+++K G
Sbjct: 383 GSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRG 434
Score = 90.1 bits (222), Expect = 2e-16
Identities = 42/113 (37%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 GRLVHGFGLKLGLE-DANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQ 177
G+ +HG+ +K G+E + + +AL+ +YAKC ++ DA ++F + D+++W +++ GY Q
Sbjct: 222 GKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQ 281
Query: 178 NGHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
NG EALKLF Q + + P+ VT+ +V S C+ + L+ G ++H SIK+G
Sbjct: 282 NGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLG 334
Score = 77.8 bits (190), Expect = 8e-13
Identities = 42/112 (37%), Positives = 66/112 (58%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQN 180
GR VH +K G D+ V + LV MYAKC +E + ++F +++V +W+S+++GY QN
Sbjct: 122 GRKVHCQIVKFGNPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQN 181
Query: 181 GHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
A + L LF +MR + + +TL ++ C + ALH G LH + IK G
Sbjct: 182 NLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCG 233
Score = 64.3 bits (155), Expect = 1e-08
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDANV--SSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYA 174
G H + +K GL +NV +AL+ YAKC E A +F + K +TW++++SGY
Sbjct: 423 GSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYG 482
Query: 175 QNGHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYAL 312
G+ +L +F M L+P+ ++LS C+ + G+ L
Sbjct: 483 IQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRL 528
>ref|XP_002512123.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549303|gb|EEF50792.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 456
Score = 126 bits (317), Expect = 2e-27
Identities = 62/112 (55%), Positives = 81/112 (72%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQN 180
GR +HG +KLG + + +ALV MYAKC M DA+ LF+T S KDV++WNSI+SG +Q
Sbjct: 224 GRSIHGLAIKLGFAEPTLMNALVHMYAKCHMNRDASYLFETASEKDVVSWNSIISGCSQM 283
Query: 181 GHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
G YEAL LF +MR ++ PDAVTLV+V S CAS+ AL G +LHA+S+K G
Sbjct: 284 GSPYEALDLFQRMRKESVSPDAVTLVSVFSACASLGALQVGSSLHAYSVKEG 335
Score = 90.1 bits (222), Expect = 2e-16
Identities = 39/113 (34%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 GRLVHGFGLKLGLE-DANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQ 177
G+ HG+ +K G++ ++ + +AL+ MY KC ++ DA ++F +S+ D+++W +++ GY Q
Sbjct: 123 GKCFHGYAIKSGVQLNSYLMTALLDMYVKCGVIRDARSVFDELSSIDLVSWTAMIVGYTQ 182
Query: 178 NGHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
+ +Y+ALKLF + + P+ VT+V+ L+ CA + L+ G ++H +IK+G
Sbjct: 183 SNLSYDALKLFLDKKWAGILPNDVTIVSALAACARMGNLNLGRSIHGLAIKLG 235
Score = 68.2 bits (165), Expect = 7e-10
Identities = 38/112 (33%), Positives = 60/112 (53%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQN 180
GR +H +K G D+ V + L YAKC +E + F +++V++W S++ GY QN
Sbjct: 23 GRKLHCQIIKAGPPDSFVLTGLTDFYAKCGEIECSRCAFDENLDRNVVSWTSMIVGYVQN 82
Query: 181 GHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
E L LF +MR + + TL +++ C + ALH G H ++IK G
Sbjct: 83 DCPVEGLILFNRMREGLIEGNQFTLGILVTACTKLGALHQGKCFHGYAIKSG 134
Score = 67.0 bits (162), Expect = 1e-09
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDANV--SSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYA 174
G +H + +K GL +NV S+AL+ YAKC A +F + K+ +TW++++ GY
Sbjct: 324 GSSLHAYSVKEGLLSSNVYVSTALLTFYAKCGDAGSARTIFDGMQEKNTVTWSAMIGGYG 383
Query: 175 QNGHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYAL 312
G A +L +F M L+P+ V T+LS C+ + G+ L
Sbjct: 384 VQGDAGGSLSIFNDMLRQELKPNEVIFTTILSACSHTGMVGEGWNL 429
>ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 871
Score = 122 bits (306), Expect = 3e-26
Identities = 58/112 (51%), Positives = 83/112 (74%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQN 180
G+L+H +K GL+D ++ ++LV MYAKC ++ DA+ +F T +KDV++WNS++SGYAQ+
Sbjct: 361 GKLLHVLVVKYGLDDTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQS 420
Query: 181 GHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
G AYEAL LF +MR+ + PDAVT+V VLS CASV A G +LH ++K G
Sbjct: 421 GSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYG 472
Score = 75.5 bits (184), Expect = 4e-12
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
Frame = +1
Query: 1 GRLVHGFGLKLGLE-DANVSSALVGMYAKCDMMEDANNLFKTIS------NKDVITWNSI 159
G+ VHG+ +K G+E ++ ++++L+ MY KC + DA ++F S D++ W ++
Sbjct: 254 GKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAM 313
Query: 160 MSGYAQNGHAYEALKLFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
+ GY Q G+ AL+LF + + P++VTL ++LS CA + + G LH +K G
Sbjct: 314 IVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYG 372
Score = 68.2 bits (165), Expect = 7e-10
Identities = 36/104 (34%), Positives = 58/104 (55%)
Frame = +1
Query: 25 LKLGLEDANVSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYAQNGHAYEALK 204
LK D+ V ++LV Y+KC + DA +F I ++ V++W S++ Y QN A E L
Sbjct: 162 LKSNAADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLM 221
Query: 205 LFYQMRLINLRPDAVTLVTVLSVCASVAALHFGYALHAHSIKVG 336
LF +MR L + T+ ++++ C + LH G +H + IK G
Sbjct: 222 LFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNG 265
Score = 59.7 bits (143), Expect = 2e-07
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +1
Query: 1 GRLVHGFGLKLGLEDAN--VSSALVGMYAKCDMMEDANNLFKTISNKDVITWNSIMSGYA 174
G +HGF LK GL ++ V +AL+ YAKC A +F + K+ +TW +++ G
Sbjct: 461 GLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCG 520
Query: 175 QNGHAYEALKLFYQMRLINLRPDAVTLVTVLSVCA 279
G +L LF M L P+ V T+L+ C+
Sbjct: 521 MQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACS 555