BLASTX nr result
ID: Cnidium21_contig00026969
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00026969 (293 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADE74631.1| unknown [Vitis vinifera] 138 5e-31 ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containin... 134 6e-30 emb|CBI24886.3| unnamed protein product [Vitis vinifera] 134 6e-30 ref|XP_002314035.1| predicted protein [Populus trichocarpa] gi|2... 126 2e-27 ref|XP_002298434.1| predicted protein [Populus trichocarpa] gi|1... 123 2e-26 >gb|ADE74631.1| unknown [Vitis vinifera] Length = 740 Score = 138 bits (347), Expect = 5e-31 Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 2/87 (2%) Frame = +2 Query: 35 MRSLSSRDFGSNN-VSMVGSPVNSWSKWSSPSGKVDWSVNGDEHSWLPRSSSFDLNKNGE 211 +RSLSSRD GSNN S+VGSPVNSWSKW SP+GK+DWSVNGDE L RSSSF+L NGE Sbjct: 608 LRSLSSRDLGSNNPASVVGSPVNSWSKWGSPTGKLDWSVNGDEMGRLKRSSSFELGNNGE 667 Query: 212 EPDLSWVQSLVKESPPE-MKDKLSAPV 289 EPDLSWVQSLVKESPPE MK+KL+APV Sbjct: 668 EPDLSWVQSLVKESPPEMMKEKLAAPV 694 >ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containing protein 30 [Vitis vinifera] Length = 740 Score = 134 bits (338), Expect = 6e-30 Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 2/87 (2%) Frame = +2 Query: 35 MRSLSSRDFGSNN-VSMVGSPVNSWSKWSSPSGKVDWSVNGDEHSWLPRSSSFDLNKNGE 211 +RSLSSRD GSNN S+VGSPVNSWSKW SP+GK+DWSVNGDE L RSSSF+L NGE Sbjct: 608 LRSLSSRDLGSNNPASVVGSPVNSWSKWGSPTGKLDWSVNGDEMGRLKRSSSFELGNNGE 667 Query: 212 EPDLSWVQSLVKESPPE-MKDKLSAPV 289 EPDLSWV SLVKESPPE MK+K +APV Sbjct: 668 EPDLSWVHSLVKESPPEMMKEKFAAPV 694 >emb|CBI24886.3| unnamed protein product [Vitis vinifera] Length = 518 Score = 134 bits (338), Expect = 6e-30 Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 2/87 (2%) Frame = +2 Query: 35 MRSLSSRDFGSNN-VSMVGSPVNSWSKWSSPSGKVDWSVNGDEHSWLPRSSSFDLNKNGE 211 +RSLSSRD GSNN S+VGSPVNSWSKW SP+GK+DWSVNGDE L RSSSF+L NGE Sbjct: 386 LRSLSSRDLGSNNPASVVGSPVNSWSKWGSPTGKLDWSVNGDEMGRLKRSSSFELGNNGE 445 Query: 212 EPDLSWVQSLVKESPPE-MKDKLSAPV 289 EPDLSWV SLVKESPPE MK+K +APV Sbjct: 446 EPDLSWVHSLVKESPPEMMKEKFAAPV 472 >ref|XP_002314035.1| predicted protein [Populus trichocarpa] gi|222850443|gb|EEE87990.1| predicted protein [Populus trichocarpa] Length = 728 Score = 126 bits (316), Expect = 2e-27 Identities = 64/88 (72%), Positives = 72/88 (81%), Gaps = 3/88 (3%) Frame = +2 Query: 35 MRSLSSRDFGSNN--VSMVGSPVNSWSKWSSPSGKVDWSVNGDEHSWLPRSSSFDLNKNG 208 +RSLSSRD GSN+ S+ GSP NSWSKW SP+GKVDWSV+GDE L RSSSF+L NG Sbjct: 604 LRSLSSRDLGSNHPMASVAGSPGNSWSKWGSPNGKVDWSVHGDELGRLRRSSSFELGNNG 663 Query: 209 EEPDLSWVQSLVKESPPEM-KDKLSAPV 289 EEPDLSWVQSLVKESPPEM K+K + PV Sbjct: 664 EEPDLSWVQSLVKESPPEMLKEKFANPV 691 >ref|XP_002298434.1| predicted protein [Populus trichocarpa] gi|118482842|gb|ABK93336.1| unknown [Populus trichocarpa] gi|222845692|gb|EEE83239.1| predicted protein [Populus trichocarpa] Length = 710 Score = 123 bits (308), Expect = 2e-26 Identities = 63/86 (73%), Positives = 70/86 (81%), Gaps = 1/86 (1%) Frame = +2 Query: 35 MRSLSSRDFGSNNVSMVGSPVNSWSKWSSPSGKVDWSVNGDEHSWLPRSSSFDLNKNGEE 214 +RSLSSRD GSNN V VNSWSKW SP+GK+DWSVNGDE L RSSSF+L NGEE Sbjct: 587 LRSLSSRDLGSNNP--VAHNVNSWSKWGSPNGKLDWSVNGDELGRLCRSSSFELGNNGEE 644 Query: 215 PDLSWVQSLVKESPPE-MKDKLSAPV 289 PDLSWVQSLVKESPPE +K+KL+ PV Sbjct: 645 PDLSWVQSLVKESPPEVLKEKLAIPV 670