BLASTX nr result

ID: Cnidium21_contig00026969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026969
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE74631.1| unknown [Vitis vinifera]                               138   5e-31
ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containin...   134   6e-30
emb|CBI24886.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_002314035.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002298434.1| predicted protein [Populus trichocarpa] gi|1...   123   2e-26

>gb|ADE74631.1| unknown [Vitis vinifera]
          Length = 740

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 2/87 (2%)
 Frame = +2

Query: 35  MRSLSSRDFGSNN-VSMVGSPVNSWSKWSSPSGKVDWSVNGDEHSWLPRSSSFDLNKNGE 211
           +RSLSSRD GSNN  S+VGSPVNSWSKW SP+GK+DWSVNGDE   L RSSSF+L  NGE
Sbjct: 608 LRSLSSRDLGSNNPASVVGSPVNSWSKWGSPTGKLDWSVNGDEMGRLKRSSSFELGNNGE 667

Query: 212 EPDLSWVQSLVKESPPE-MKDKLSAPV 289
           EPDLSWVQSLVKESPPE MK+KL+APV
Sbjct: 668 EPDLSWVQSLVKESPPEMMKEKLAAPV 694


>ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containing protein 30 [Vitis
           vinifera]
          Length = 740

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 2/87 (2%)
 Frame = +2

Query: 35  MRSLSSRDFGSNN-VSMVGSPVNSWSKWSSPSGKVDWSVNGDEHSWLPRSSSFDLNKNGE 211
           +RSLSSRD GSNN  S+VGSPVNSWSKW SP+GK+DWSVNGDE   L RSSSF+L  NGE
Sbjct: 608 LRSLSSRDLGSNNPASVVGSPVNSWSKWGSPTGKLDWSVNGDEMGRLKRSSSFELGNNGE 667

Query: 212 EPDLSWVQSLVKESPPE-MKDKLSAPV 289
           EPDLSWV SLVKESPPE MK+K +APV
Sbjct: 668 EPDLSWVHSLVKESPPEMMKEKFAAPV 694


>emb|CBI24886.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 2/87 (2%)
 Frame = +2

Query: 35  MRSLSSRDFGSNN-VSMVGSPVNSWSKWSSPSGKVDWSVNGDEHSWLPRSSSFDLNKNGE 211
           +RSLSSRD GSNN  S+VGSPVNSWSKW SP+GK+DWSVNGDE   L RSSSF+L  NGE
Sbjct: 386 LRSLSSRDLGSNNPASVVGSPVNSWSKWGSPTGKLDWSVNGDEMGRLKRSSSFELGNNGE 445

Query: 212 EPDLSWVQSLVKESPPE-MKDKLSAPV 289
           EPDLSWV SLVKESPPE MK+K +APV
Sbjct: 446 EPDLSWVHSLVKESPPEMMKEKFAAPV 472


>ref|XP_002314035.1| predicted protein [Populus trichocarpa] gi|222850443|gb|EEE87990.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/88 (72%), Positives = 72/88 (81%), Gaps = 3/88 (3%)
 Frame = +2

Query: 35  MRSLSSRDFGSNN--VSMVGSPVNSWSKWSSPSGKVDWSVNGDEHSWLPRSSSFDLNKNG 208
           +RSLSSRD GSN+   S+ GSP NSWSKW SP+GKVDWSV+GDE   L RSSSF+L  NG
Sbjct: 604 LRSLSSRDLGSNHPMASVAGSPGNSWSKWGSPNGKVDWSVHGDELGRLRRSSSFELGNNG 663

Query: 209 EEPDLSWVQSLVKESPPEM-KDKLSAPV 289
           EEPDLSWVQSLVKESPPEM K+K + PV
Sbjct: 664 EEPDLSWVQSLVKESPPEMLKEKFANPV 691


>ref|XP_002298434.1| predicted protein [Populus trichocarpa] gi|118482842|gb|ABK93336.1|
           unknown [Populus trichocarpa]
           gi|222845692|gb|EEE83239.1| predicted protein [Populus
           trichocarpa]
          Length = 710

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/86 (73%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = +2

Query: 35  MRSLSSRDFGSNNVSMVGSPVNSWSKWSSPSGKVDWSVNGDEHSWLPRSSSFDLNKNGEE 214
           +RSLSSRD GSNN   V   VNSWSKW SP+GK+DWSVNGDE   L RSSSF+L  NGEE
Sbjct: 587 LRSLSSRDLGSNNP--VAHNVNSWSKWGSPNGKLDWSVNGDELGRLCRSSSFELGNNGEE 644

Query: 215 PDLSWVQSLVKESPPE-MKDKLSAPV 289
           PDLSWVQSLVKESPPE +K+KL+ PV
Sbjct: 645 PDLSWVQSLVKESPPEVLKEKLAIPV 670


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