BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026939
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   250   4e-64
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]        249   5e-64
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         249   5e-64
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...   249   5e-64
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     249   5e-64

>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  250 bits (638), Expect = 4e-64
 Identities = 124/223 (55%), Positives = 159/223 (71%)
 Frame = +2

Query: 5    SQLRYSQIIGSLQYLANCTRPDISYSVSKLARYTSCPNKTHWEALDRVLRYLKGTSHLVL 184
            +QL YSQIIGSL YLA+ TRPDIS++VSKL+R+TS P   HW AL+RV+RYLKGT  L L
Sbjct: 870  NQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGL 929

Query: 185  KYRRRPDVLEGYSDASWIAKKSGSNGVTGYVFTLAGGAISWKSSKQTIITRSTFEAELCA 364
             Y   P VLEGYSD++WI+        +GYVFTL GGA+SW+S KQTI+TRST EAEL A
Sbjct: 930  HYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTA 989

Query: 365  LDATGTEAEWLHGLMSMIPVVSRPLPAFAVYCDSRTTIDKINSKKYNAKTKRHIQVRLKS 544
            LD    EAEWL  L+  +PVV +P+PA  + CD++T I K+NS K N K+ RH++ RLKS
Sbjct: 990  LDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKS 1049

Query: 545  IRGLVSDRIIAVEFIGTQDNIADPLTKGLEHAVVLKSRLGMGL 673
            +R L +  +I +++I T  N+ADP TKGL   V+  +   MGL
Sbjct: 1050 VRKLRNSGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGL 1092


>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  249 bits (637), Expect = 5e-64
 Identities = 124/223 (55%), Positives = 159/223 (71%)
 Frame = +2

Query: 5    SQLRYSQIIGSLQYLANCTRPDISYSVSKLARYTSCPNKTHWEALDRVLRYLKGTSHLVL 184
            +QL YSQIIGSL YLA+ TRPDIS++VSKL+R+TS P   HW AL+RV+RYLKGT  L L
Sbjct: 1049 NQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGL 1108

Query: 185  KYRRRPDVLEGYSDASWIAKKSGSNGVTGYVFTLAGGAISWKSSKQTIITRSTFEAELCA 364
             Y   P VLEGYSD++WI+        +GYVFTL GGA+SW+S KQTI+TRST EAEL A
Sbjct: 1109 HYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTA 1168

Query: 365  LDATGTEAEWLHGLMSMIPVVSRPLPAFAVYCDSRTTIDKINSKKYNAKTKRHIQVRLKS 544
            LD    EAEWL  L+  +PVV +P+PA  + CD++T I K+NS K N K+ RH++ RLKS
Sbjct: 1169 LDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKS 1228

Query: 545  IRGLVSDRIIAVEFIGTQDNIADPLTKGLEHAVVLKSRLGMGL 673
            +R L +  +I +++I T  N+ADP TKGL   V+  +   MGL
Sbjct: 1229 VRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGL 1271


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  249 bits (637), Expect = 5e-64
 Identities = 124/223 (55%), Positives = 159/223 (71%)
 Frame = +2

Query: 5    SQLRYSQIIGSLQYLANCTRPDISYSVSKLARYTSCPNKTHWEALDRVLRYLKGTSHLVL 184
            +QL YSQIIGSL YLA+ TRPDIS++VSKL+R+TS P   HW AL+RV+RYLKGT  L L
Sbjct: 1077 NQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGL 1136

Query: 185  KYRRRPDVLEGYSDASWIAKKSGSNGVTGYVFTLAGGAISWKSSKQTIITRSTFEAELCA 364
             Y   P VLEGYSD++WI+        +GYVFTL GGA+SW+S KQTI+TRST EAEL A
Sbjct: 1137 HYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTA 1196

Query: 365  LDATGTEAEWLHGLMSMIPVVSRPLPAFAVYCDSRTTIDKINSKKYNAKTKRHIQVRLKS 544
            LD    EAEWL  L+  +PVV +P+PA  + CD++T I K+NS K N K+ RH++ RLKS
Sbjct: 1197 LDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKS 1256

Query: 545  IRGLVSDRIIAVEFIGTQDNIADPLTKGLEHAVVLKSRLGMGL 673
            +R L +  +I +++I T  N+ADP TKGL   V+  +   MGL
Sbjct: 1257 VRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGL 1299


>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1518

 Score =  249 bits (637), Expect = 5e-64
 Identities = 124/223 (55%), Positives = 159/223 (71%)
 Frame = +2

Query: 5    SQLRYSQIIGSLQYLANCTRPDISYSVSKLARYTSCPNKTHWEALDRVLRYLKGTSHLVL 184
            +QL YSQIIGSL YLA+ TRPDIS++VSKL+R+TS P   HW AL+RV+RYLKGT  L L
Sbjct: 1293 NQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGL 1352

Query: 185  KYRRRPDVLEGYSDASWIAKKSGSNGVTGYVFTLAGGAISWKSSKQTIITRSTFEAELCA 364
             Y   P VLEGYSD++WI+        +GYVFTL GGA+SW+S KQTI+TRST EAEL A
Sbjct: 1353 HYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTA 1412

Query: 365  LDATGTEAEWLHGLMSMIPVVSRPLPAFAVYCDSRTTIDKINSKKYNAKTKRHIQVRLKS 544
            LD    EAEWL  L+  +PVV +P+PA  + CD++T I K+NS K N K+ RH++ RLKS
Sbjct: 1413 LDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKS 1472

Query: 545  IRGLVSDRIIAVEFIGTQDNIADPLTKGLEHAVVLKSRLGMGL 673
            +R L +  +I +++I T  N+ADP TKGL   V+  +   MGL
Sbjct: 1473 VRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGL 1515


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  249 bits (637), Expect = 5e-64
 Identities = 124/223 (55%), Positives = 159/223 (71%)
 Frame = +2

Query: 5    SQLRYSQIIGSLQYLANCTRPDISYSVSKLARYTSCPNKTHWEALDRVLRYLKGTSHLVL 184
            +QL YSQIIGSL YLA+ TRPDIS++VSKL+R+TS P   HW AL+RV+RYLKGT  L L
Sbjct: 1166 NQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGL 1225

Query: 185  KYRRRPDVLEGYSDASWIAKKSGSNGVTGYVFTLAGGAISWKSSKQTIITRSTFEAELCA 364
             Y   P VLEGYSD++WI+        +GYVFTL GGA+SW+S KQTI+TRST EAEL A
Sbjct: 1226 HYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTA 1285

Query: 365  LDATGTEAEWLHGLMSMIPVVSRPLPAFAVYCDSRTTIDKINSKKYNAKTKRHIQVRLKS 544
            LD    EAEWL  L+  +PVV +P+PA  + CD++T I K+NS K N K+ RH++ RLKS
Sbjct: 1286 LDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKS 1345

Query: 545  IRGLVSDRIIAVEFIGTQDNIADPLTKGLEHAVVLKSRLGMGL 673
            +R L +  +I +++I T  N+ADP TKGL   V+  +   MGL
Sbjct: 1346 VRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGL 1388