BLASTX nr result

ID: Cnidium21_contig00026932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026932
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   138   5e-31
ref|XP_003633623.1| PREDICTED: uncharacterized protein LOC100257...   135   4e-30
gb|AEI84328.1| ubiquitin-protein ligase E3 [Jatropha curcas]          122   2e-26
ref|XP_002511894.1| zinc finger protein, putative [Ricinus commu...   122   3e-26
ref|NP_191705.1| brassinosteroid-responsive RING-H2 [Arabidopsis...   122   3e-26

>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 167

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/85 (74%), Positives = 70/85 (82%)
 Frame = -3

Query: 380 GESPQSCAVCLYELEHGEEIRLLSNCKHIFHRGCLDRWMDHDQKTCPLCRTNFVPFGLQD 201
           G++P+SCAVCLY+ E GEEIR L+NCKHIFHR CLDRWMDHDQKTCPLCRT FVP  +QD
Sbjct: 83  GDAPESCAVCLYDFEVGEEIRRLTNCKHIFHRSCLDRWMDHDQKTCPLCRTPFVPDEMQD 142

Query: 200 VFNQRLWDACGINDEYYNSEYNSVS 126
            FNQRLW A GI D Y  SEY +VS
Sbjct: 143 EFNQRLWAASGITDFY--SEYGTVS 165


>ref|XP_003633623.1| PREDICTED: uncharacterized protein LOC100257890 [Vitis vinifera]
          Length = 290

 Score =  135 bits (339), Expect = 4e-30
 Identities = 62/86 (72%), Positives = 70/86 (81%)
 Frame = -3

Query: 383 SGESPQSCAVCLYELEHGEEIRLLSNCKHIFHRGCLDRWMDHDQKTCPLCRTNFVPFGLQ 204
           SG++P+SC VCLY+ E GEEIR L+NCK+IFHR CLDRWMDHDQKTCPLCRT FVP  +Q
Sbjct: 205 SGDAPESCVVCLYDFEVGEEIRRLTNCKNIFHRSCLDRWMDHDQKTCPLCRTPFVPDEMQ 264

Query: 203 DVFNQRLWDACGINDEYYNSEYNSVS 126
           D FNQRLW A GI D Y  SEY +VS
Sbjct: 265 DEFNQRLWVASGITDFY--SEYGTVS 288


>gb|AEI84328.1| ubiquitin-protein ligase E3 [Jatropha curcas]
          Length = 171

 Score =  122 bits (307), Expect = 2e-26
 Identities = 55/84 (65%), Positives = 66/84 (78%)
 Frame = -3

Query: 380 GESPQSCAVCLYELEHGEEIRLLSNCKHIFHRGCLDRWMDHDQKTCPLCRTNFVPFGLQD 201
           G+ P+SCAVCLYE +  +EIR L NCKHIFHR CLDRWMDHD+ TCPLCRT+FVP  +Q+
Sbjct: 86  GDLPESCAVCLYEFDGEDEIRWLKNCKHIFHRACLDRWMDHDRNTCPLCRTSFVPDEMQE 145

Query: 200 VFNQRLWDACGINDEYYNSEYNSV 129
            FNQRL  A   N ++Y SEY+SV
Sbjct: 146 EFNQRLL-AASDNSDFYYSEYSSV 168


>ref|XP_002511894.1| zinc finger protein, putative [Ricinus communis]
           gi|223549074|gb|EEF50563.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 171

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
 Frame = -3

Query: 377 ESPQSCAVCLYELEHGEEIRLLSNCKHIFHRGCLDRWMDHDQKTCPLCRTNFVPFGLQDV 198
           E P+SCAVCLYE E   EIR L NCKHIFHR CLDRWMDHD+ TCPLCRT+FVP  +Q+ 
Sbjct: 85  ELPESCAVCLYEFEREAEIRWLKNCKHIFHRACLDRWMDHDRNTCPLCRTSFVPDEMQEE 144

Query: 197 FNQRLWDACGIND-EYYNSEYNSV 129
           FNQRL  A   ND +++ SEY+SV
Sbjct: 145 FNQRLLAAAADNDGDFFYSEYSSV 168


>ref|NP_191705.1| brassinosteroid-responsive RING-H2 [Arabidopsis thaliana]
           gi|297820998|ref|XP_002878382.1|
           brassinosteroid-responsive ring-H2 [Arabidopsis lyrata
           subsp. lyrata] gi|4689366|gb|AAD27870.1|AF134155_1 BRH1
           RING finger protein [Arabidopsis thaliana]
           gi|6850837|emb|CAB71076.1| RING finger protein
           [Arabidopsis thaliana] gi|17644157|gb|AAL38776.1|
           putative RING finger protein [Arabidopsis thaliana]
           gi|21436189|gb|AAM51382.1| putative RING finger protein
           [Arabidopsis thaliana] gi|21554590|gb|AAM63625.1| RING
           finger protein [Arabidopsis thaliana]
           gi|297324220|gb|EFH54641.1| brassinosteroid-responsive
           ring-H2 [Arabidopsis lyrata subsp. lyrata]
           gi|332646687|gb|AEE80208.1| brassinosteroid-responsive
           RING-H2 [Arabidopsis thaliana]
          Length = 170

 Score =  122 bits (306), Expect = 3e-26
 Identities = 54/76 (71%), Positives = 62/76 (81%), Gaps = 1/76 (1%)
 Frame = -3

Query: 383 SGES-PQSCAVCLYELEHGEEIRLLSNCKHIFHRGCLDRWMDHDQKTCPLCRTNFVPFGL 207
           SGE  P++CAVCLYE E  +EIR L NC+HIFHR CLDRWMDHDQKTCPLCRT FVP  +
Sbjct: 86  SGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCPLCRTPFVPDEM 145

Query: 206 QDVFNQRLWDACGIND 159
           Q+ FNQRLW A G++D
Sbjct: 146 QEEFNQRLWAASGVHD 161


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