BLASTX nr result

ID: Cnidium21_contig00026898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026898
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60648.1| hypothetical protein VITISV_033947 [Vitis vinifera]    72   4e-11
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...    69   3e-10
gb|AAO26691.1|AF478379_1 gag-pol polyprotein [Vitis vinifera]          68   9e-10
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]            68   9e-10
emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera]    68   9e-10

>emb|CAN60648.1| hypothetical protein VITISV_033947 [Vitis vinifera]
          Length = 1257

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/110 (37%), Positives = 61/110 (55%)
 Frame = -3

Query: 332 GKFCLMSNFTKEWFLDSRATDHISPYSEDFDELNPVLETNNFITIPDGSRARVTHNGKVV 153
           GK CL+S+  K W +DS ATDH++   + F        +   +T+ DGS   +  +G V 
Sbjct: 320 GKTCLVSSSNK-WIIDSGATDHMTGNHKTFSTFRT--HSAPLVTVADGSTYEIKGSGTVK 376

Query: 152 LNNKITMSNVLLVPAFHYRLLSVHKLCAYMNSNIIFSAKHCHLQDLFQKQ 3
             + IT+S+VL +P   + L+SV KL   +N ++ FS  HC  QDL  KQ
Sbjct: 377 PTSSITLSSVLNLPNLAFNLISVGKLTKNLNCSVSFSPYHCVFQDLMTKQ 426


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
 Frame = -3

Query: 296  WFLDSRATDHISPYSEDFDE---LNPVLETNNFITIPDGSRARVTHNGKVVLNNKITMSN 126
            W LDS ATDH++    +      +NP+      + +P+G     TH+G V L++ IT+ +
Sbjct: 743  WILDSGATDHVTCSLHNLHSHKRINPIT-----VKLPNGQYVHATHSGTVQLSSNITLHD 797

Query: 125  VLLVPAFHYRLLSVHKLCAYMNSNIIFSAKHCHLQDL 15
            VL +P+F + L+S+ KL + +N  +IFS+  C LQ++
Sbjct: 798  VLYIPSFTFNLISISKLVSSINCELIFSSTSCVLQEM 834


>gb|AAO26691.1|AF478379_1 gag-pol polyprotein [Vitis vinifera]
          Length = 450

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/110 (35%), Positives = 60/110 (54%)
 Frame = -3

Query: 332 GKFCLMSNFTKEWFLDSRATDHISPYSEDFDELNPVLETNNFITIPDGSRARVTHNGKVV 153
           GK CL+S+  K W +DS ATDH++   + F        +   +T+ DGS   +  +G V 
Sbjct: 241 GKTCLVSSSNK-WIIDSGATDHMAGNHKTFSTFRT--HSAPPVTVADGSTYEIKGSGTVK 297

Query: 152 LNNKITMSNVLLVPAFHYRLLSVHKLCAYMNSNIIFSAKHCHLQDLFQKQ 3
             + IT+S+VL +P   + L+SV KL   +N ++ F   HC  QDL  K+
Sbjct: 298 PTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCVFQDLMTKR 347


>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/110 (35%), Positives = 60/110 (54%)
 Frame = -3

Query: 332 GKFCLMSNFTKEWFLDSRATDHISPYSEDFDELNPVLETNNFITIPDGSRARVTHNGKVV 153
           GK CL+S+  K W +DS ATDH++   + F        +   +T+ DGS   +  +G V 
Sbjct: 321 GKTCLVSSSNK-WIIDSGATDHMTGNHKTFSTFRT--HSAPPVTVADGSTYEIKGSGTVK 377

Query: 152 LNNKITMSNVLLVPAFHYRLLSVHKLCAYMNSNIIFSAKHCHLQDLFQKQ 3
             + IT+S+VL +P   + L+SV KL   +N ++ F   HC  QDL  K+
Sbjct: 378 PTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCVFQDLMTKR 427


>emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera]
          Length = 1189

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/110 (35%), Positives = 60/110 (54%)
 Frame = -3

Query: 332 GKFCLMSNFTKEWFLDSRATDHISPYSEDFDELNPVLETNNFITIPDGSRARVTHNGKVV 153
           GK CL+S+  K W +DS ATDH++   + F        +   +T+ DGS   +  +G V 
Sbjct: 321 GKTCLVSSSNK-WIIDSGATDHMTGNHKTFSTFRT--HSAPPVTVADGSTYEIKGSGTVK 377

Query: 152 LNNKITMSNVLLVPAFHYRLLSVHKLCAYMNSNIIFSAKHCHLQDLFQKQ 3
             + IT+S+VL +P   + L+SV KL   +N ++ F   HC  QDL  K+
Sbjct: 378 PTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCVFQDLMTKR 427


Top