BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026894
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containi...   144   7e-69
emb|CBI29835.3| unnamed protein product [Vitis vinifera]              142   7e-68
ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi...   142   7e-68
ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-67
ref|XP_003625140.1| Pentatricopeptide repeat-containing protein ...   140   8e-67

>ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Glycine max]
          Length = 832

 Score =  144 bits (364), Expect(2) = 7e-69
 Identities = 68/92 (73%), Positives = 77/92 (83%)
 Frame = -3

Query: 493 FCLMELQRNYFARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDA*TYNALISVHA 314
           F  ++ Q+NY ARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPD  TYNA+I+ H 
Sbjct: 138 FRWLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHG 197

Query: 313 RAGQWRWAMNIMEDMLRAAVCNCILPSNQSLY 218
           RAGQWRWAMNIM+DMLRAA+     P ++S Y
Sbjct: 198 RAGQWRWAMNIMDDMLRAAI-----PPSRSTY 224



 Score =  142 bits (359), Expect(2) = 7e-69
 Identities = 65/73 (89%), Positives = 71/73 (97%)
 Frame = -2

Query: 221 IPPSRATYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIVLSAYKSGGEYAKAL 42
           IPPSR+TYNNLINACGSSGNWKEALNVCKKMT+NGVGPDLVTHNI+LSA+KSG +Y+KAL
Sbjct: 217 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKAL 276

Query: 41  SYFELMKGTKIRP 3
           SYFELMKGT IRP
Sbjct: 277 SYFELMKGTHIRP 289


>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  142 bits (358), Expect(2) = 7e-68
 Identities = 74/119 (62%), Positives = 85/119 (71%), Gaps = 11/119 (9%)
 Frame = -3

Query: 541 GYCTAKVYMLIINEIQ-----------FCLMELQRNYFARNDIYNMMIRLHARHNRTDQA 395
           G  + K + L+I EI            F  M+ Q+NY ARNDIYNMMIRLHARHN  DQA
Sbjct: 122 GRFSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQA 181

Query: 394 RGLFFEMQEWRCKPDA*TYNALISVHARAGQWRWAMNIMEDMLRAAVCNCILPSNQSLY 218
           RGLFFEMQ+WRCKPDA TYNALI+ H RAGQWRWAMNIM+DMLRAA+     P ++S Y
Sbjct: 182 RGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI-----PPSRSTY 235



 Score =  141 bits (356), Expect(2) = 7e-68
 Identities = 65/73 (89%), Positives = 69/73 (94%)
 Frame = -2

Query: 221 IPPSRATYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIVLSAYKSGGEYAKAL 42
           IPPSR+TYNNLINACGSSGNWKEALNVCKKMT+NGVGPDLVTHNIVLSAYK G +Y+K L
Sbjct: 228 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVL 287

Query: 41  SYFELMKGTKIRP 3
           SYFELMKGT IRP
Sbjct: 288 SYFELMKGTNIRP 300



 Score = 45.4 bits (106), Expect(2) = 1e-07
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 35/106 (33%)
 Frame = -2

Query: 215 PSRATYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVT-------------------- 96
           P+  +YN LI+A GS G   EA+ +  +M  NGV P++V+                    
Sbjct: 442 PNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSV 501

Query: 95  ---------------HNIVLSAYKSGGEYAKALSYFELMKGTKIRP 3
                          +N  + +Y S GEY KALS +  M+  K++P
Sbjct: 502 LSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKP 547



 Score = 36.2 bits (82), Expect(2) = 1e-07
 Identities = 18/61 (29%), Positives = 34/61 (55%)
 Frame = -3

Query: 445 YNMMIRLHARHNRTDQARGLFFEMQEWRCKPDA*TYNALISVHARAGQWRWAMNIMEDML 266
           YN +I  +A H    +A  +F E+++    PD  +Y +L++ + ++G+   AM + E M 
Sbjct: 377 YNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMR 436

Query: 265 R 263
           R
Sbjct: 437 R 437



 Score = 41.6 bits (96), Expect(2) = 9e-06
 Identities = 22/69 (31%), Positives = 37/69 (53%)
 Frame = -2

Query: 215 PSRATYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIVLSAYKSGGEYAKALSY 36
           P   TY  +I+A   + NW++A  +  +M  + V PD +  + ++ A+  GG+ AK L  
Sbjct: 617 PDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVL 676

Query: 35  FELMKGTKI 9
            E M+  KI
Sbjct: 677 AEFMREKKI 685



 Score = 33.9 bits (76), Expect(2) = 9e-06
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -3

Query: 445 YNMMIRLHARHNRTDQARGLFFEMQEWRCKPDA*TYNALISVHARAGQWRWAMNIMEDML 266
           YN  I  +      D+A  L+  M+  + KPD  TYN LIS   +  ++  A+  +++M+
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576


>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score =  142 bits (358), Expect(2) = 7e-68
 Identities = 74/119 (62%), Positives = 85/119 (71%), Gaps = 11/119 (9%)
 Frame = -3

Query: 541 GYCTAKVYMLIINEIQ-----------FCLMELQRNYFARNDIYNMMIRLHARHNRTDQA 395
           G  + K + L+I EI            F  M+ Q+NY ARNDIYNMMIRLHARHN  DQA
Sbjct: 122 GRFSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQA 181

Query: 394 RGLFFEMQEWRCKPDA*TYNALISVHARAGQWRWAMNIMEDMLRAAVCNCILPSNQSLY 218
           RGLFFEMQ+WRCKPDA TYNALI+ H RAGQWRWAMNIM+DMLRAA+     P ++S Y
Sbjct: 182 RGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI-----PPSRSTY 235



 Score =  141 bits (356), Expect(2) = 7e-68
 Identities = 65/73 (89%), Positives = 69/73 (94%)
 Frame = -2

Query: 221 IPPSRATYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIVLSAYKSGGEYAKAL 42
           IPPSR+TYNNLINACGSSGNWKEALNVCKKMT+NGVGPDLVTHNIVLSAYK G +Y+K L
Sbjct: 228 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVL 287

Query: 41  SYFELMKGTKIRP 3
           SYFELMKGT IRP
Sbjct: 288 SYFELMKGTNIRP 300



 Score = 45.4 bits (106), Expect(2) = 1e-07
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 35/106 (33%)
 Frame = -2

Query: 215 PSRATYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVT-------------------- 96
           P+  +YN LI+A GS G   EA+ +  +M  NGV P++V+                    
Sbjct: 442 PNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSV 501

Query: 95  ---------------HNIVLSAYKSGGEYAKALSYFELMKGTKIRP 3
                          +N  + +Y S GEY KALS +  M+  K++P
Sbjct: 502 LSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKP 547



 Score = 36.2 bits (82), Expect(2) = 1e-07
 Identities = 18/61 (29%), Positives = 34/61 (55%)
 Frame = -3

Query: 445 YNMMIRLHARHNRTDQARGLFFEMQEWRCKPDA*TYNALISVHARAGQWRWAMNIMEDML 266
           YN +I  +A H    +A  +F E+++    PD  +Y +L++ + ++G+   AM + E M 
Sbjct: 377 YNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMR 436

Query: 265 R 263
           R
Sbjct: 437 R 437



 Score = 41.6 bits (96), Expect(2) = 9e-06
 Identities = 22/69 (31%), Positives = 37/69 (53%)
 Frame = -2

Query: 215 PSRATYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIVLSAYKSGGEYAKALSY 36
           P   TY  +I+A   + NW++A  +  +M  + V PD +  + ++ A+  GG+ AK L  
Sbjct: 617 PDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVL 676

Query: 35  FELMKGTKI 9
            E M+  KI
Sbjct: 677 AEFMREKKI 685



 Score = 33.9 bits (76), Expect(2) = 9e-06
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -3

Query: 445 YNMMIRLHARHNRTDQARGLFFEMQEWRCKPDA*TYNALISVHARAGQWRWAMNIMEDML 266
           YN  I  +      D+A  L+  M+  + KPD  TYN LIS   +  ++  A+  +++M+
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576


>ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Cucumis sativus]
          Length = 707

 Score =  143 bits (360), Expect(2) = 2e-67
 Identities = 68/90 (75%), Positives = 74/90 (82%), Gaps = 5/90 (5%)
 Frame = -3

Query: 508 INEIQFCL-----MELQRNYFARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDA* 344
           I  I+ C+     M+ QRNY ARNDIYNMMIRLHARHNR DQARGLFFEMQ+WRCKPD  
Sbjct: 7   IGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVE 66

Query: 343 TYNALISVHARAGQWRWAMNIMEDMLRAAV 254
           TYNALI+ H RAGQWRWA NIMEDMLRAA+
Sbjct: 67  TYNALINAHGRAGQWRWATNIMEDMLRAAI 96



 Score =  139 bits (351), Expect(2) = 2e-67
 Identities = 64/73 (87%), Positives = 69/73 (94%)
 Frame = -2

Query: 221 IPPSRATYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIVLSAYKSGGEYAKAL 42
           IPPSR+T+NNLINACGS GNW+EAL VCKKMTDNGVGPDLVTHNIVLSAYKSG +Y+KAL
Sbjct: 96  IPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKAL 155

Query: 41  SYFELMKGTKIRP 3
           SYFELMKGT IRP
Sbjct: 156 SYFELMKGTNIRP 168


>ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500155|gb|AES81358.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 855

 Score =  140 bits (353), Expect(2) = 8e-67
 Identities = 68/92 (73%), Positives = 76/92 (82%)
 Frame = -3

Query: 493 FCLMELQRNYFARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDA*TYNALISVHA 314
           F  M+ Q+NY AR DIYNMMIRLHARHNRTDQARGLFFEMQ+ RCKPDA TYNALI+ H 
Sbjct: 137 FSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHG 196

Query: 313 RAGQWRWAMNIMEDMLRAAVCNCILPSNQSLY 218
           RAGQWRWAMNIM+DMLRAA+     P ++S Y
Sbjct: 197 RAGQWRWAMNIMDDMLRAAI-----PPSRSTY 223



 Score =  140 bits (352), Expect(2) = 8e-67
 Identities = 64/73 (87%), Positives = 71/73 (97%)
 Frame = -2

Query: 221 IPPSRATYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIVLSAYKSGGEYAKAL 42
           IPPSR+TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNI+L+A+KSG +Y+KAL
Sbjct: 216 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKAL 275

Query: 41  SYFELMKGTKIRP 3
           SYFEL+KGT IRP
Sbjct: 276 SYFELIKGTHIRP 288