BLASTX nr result
ID: Cnidium21_contig00026881
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00026881 (544 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glyci... 143 2e-32 ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis... 139 2e-31 emb|CBI26799.3| unnamed protein product [Vitis vinifera] 139 2e-31 emb|CAN69348.1| hypothetical protein VITISV_005799 [Vitis vinifera] 139 4e-31 ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucum... 134 1e-29 >ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glycine max] Length = 1829 Score = 143 bits (360), Expect = 2e-32 Identities = 61/87 (70%), Positives = 80/87 (91%) Frame = -3 Query: 434 MSLPPVECVYVTEECLKEWKSGNPSFKLNQSVPIVRFLYELCWSMVRSDLPFQRCKLALD 255 MSLPP+EC YVTEEC++EW+SGNP+ K++Q VP++RFLYELCW+MVR +LPFQ+CK+ALD Sbjct: 1 MSLPPIECAYVTEECIREWRSGNPALKVSQPVPMLRFLYELCWTMVRGELPFQKCKVALD 60 Query: 254 SVEFSDREADEGVASDFADIVTQMAQD 174 SV FSD+ ++E +AS+F+DIVTQMAQD Sbjct: 61 SVIFSDKASNEKIASNFSDIVTQMAQD 87 >ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis vinifera] Length = 1849 Score = 139 bits (351), Expect = 2e-31 Identities = 61/89 (68%), Positives = 82/89 (92%) Frame = -3 Query: 434 MSLPPVECVYVTEECLKEWKSGNPSFKLNQSVPIVRFLYELCWSMVRSDLPFQRCKLALD 255 MSLPP+EC++VT++CL+EWKSGNPSFK++ +VP++RFLYELC ++VR +LP +CK+ALD Sbjct: 1 MSLPPIECIHVTDDCLREWKSGNPSFKVSGTVPMLRFLYELCSTLVRGELPLHKCKVALD 60 Query: 254 SVEFSDREADEGVASDFADIVTQMAQDVS 168 SVEFSD+EADE +AS+FADIVTQMA D++ Sbjct: 61 SVEFSDKEADEELASNFADIVTQMALDLT 89 >emb|CBI26799.3| unnamed protein product [Vitis vinifera] Length = 1767 Score = 139 bits (351), Expect = 2e-31 Identities = 61/89 (68%), Positives = 82/89 (92%) Frame = -3 Query: 434 MSLPPVECVYVTEECLKEWKSGNPSFKLNQSVPIVRFLYELCWSMVRSDLPFQRCKLALD 255 MSLPP+EC++VT++CL+EWKSGNPSFK++ +VP++RFLYELC ++VR +LP +CK+ALD Sbjct: 1 MSLPPIECIHVTDDCLREWKSGNPSFKVSGTVPMLRFLYELCSTLVRGELPLHKCKVALD 60 Query: 254 SVEFSDREADEGVASDFADIVTQMAQDVS 168 SVEFSD+EADE +AS+FADIVTQMA D++ Sbjct: 61 SVEFSDKEADEELASNFADIVTQMALDLT 89 >emb|CAN69348.1| hypothetical protein VITISV_005799 [Vitis vinifera] Length = 800 Score = 139 bits (349), Expect = 4e-31 Identities = 61/87 (70%), Positives = 80/87 (91%) Frame = -3 Query: 434 MSLPPVECVYVTEECLKEWKSGNPSFKLNQSVPIVRFLYELCWSMVRSDLPFQRCKLALD 255 MSLPP+EC++VT++CL+EWKSGNPSFK++ +VP++RFLYELC ++VR +LP +CK+ALD Sbjct: 1 MSLPPIECIHVTDDCLREWKSGNPSFKVSGTVPMLRFLYELCSTLVRGELPLHKCKVALD 60 Query: 254 SVEFSDREADEGVASDFADIVTQMAQD 174 SVEFSD+EADE +AS+FADIVTQMA D Sbjct: 61 SVEFSDKEADEELASNFADIVTQMALD 87 >ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucumis sativus] gi|449506883|ref|XP_004162874.1| PREDICTED: THO complex subunit 2-like [Cucumis sativus] Length = 1887 Score = 134 bits (336), Expect = 1e-29 Identities = 58/89 (65%), Positives = 76/89 (85%) Frame = -3 Query: 434 MSLPPVECVYVTEECLKEWKSGNPSFKLNQSVPIVRFLYELCWSMVRSDLPFQRCKLALD 255 M+LPPVEC+YV E ++EWKSGN SF++ Q VP+VRFLYELCW+MVR DLPFQ+CK ALD Sbjct: 1 MALPPVECMYVVESNIREWKSGNSSFRVPQPVPVVRFLYELCWTMVRGDLPFQKCKAALD 60 Query: 254 SVEFSDREADEGVASDFADIVTQMAQDVS 168 SVEFS++ + E + S FAD++TQ+AQD++ Sbjct: 61 SVEFSEKMSAEELGSTFADVITQLAQDIT 89