BLASTX nr result

ID: Cnidium21_contig00026881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026881
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glyci...   143   2e-32
ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis...   139   2e-31
emb|CBI26799.3| unnamed protein product [Vitis vinifera]              139   2e-31
emb|CAN69348.1| hypothetical protein VITISV_005799 [Vitis vinifera]   139   4e-31
ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucum...   134   1e-29

>ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glycine max]
          Length = 1829

 Score =  143 bits (360), Expect = 2e-32
 Identities = 61/87 (70%), Positives = 80/87 (91%)
 Frame = -3

Query: 434 MSLPPVECVYVTEECLKEWKSGNPSFKLNQSVPIVRFLYELCWSMVRSDLPFQRCKLALD 255
           MSLPP+EC YVTEEC++EW+SGNP+ K++Q VP++RFLYELCW+MVR +LPFQ+CK+ALD
Sbjct: 1   MSLPPIECAYVTEECIREWRSGNPALKVSQPVPMLRFLYELCWTMVRGELPFQKCKVALD 60

Query: 254 SVEFSDREADEGVASDFADIVTQMAQD 174
           SV FSD+ ++E +AS+F+DIVTQMAQD
Sbjct: 61  SVIFSDKASNEKIASNFSDIVTQMAQD 87


>ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis vinifera]
          Length = 1849

 Score =  139 bits (351), Expect = 2e-31
 Identities = 61/89 (68%), Positives = 82/89 (92%)
 Frame = -3

Query: 434 MSLPPVECVYVTEECLKEWKSGNPSFKLNQSVPIVRFLYELCWSMVRSDLPFQRCKLALD 255
           MSLPP+EC++VT++CL+EWKSGNPSFK++ +VP++RFLYELC ++VR +LP  +CK+ALD
Sbjct: 1   MSLPPIECIHVTDDCLREWKSGNPSFKVSGTVPMLRFLYELCSTLVRGELPLHKCKVALD 60

Query: 254 SVEFSDREADEGVASDFADIVTQMAQDVS 168
           SVEFSD+EADE +AS+FADIVTQMA D++
Sbjct: 61  SVEFSDKEADEELASNFADIVTQMALDLT 89


>emb|CBI26799.3| unnamed protein product [Vitis vinifera]
          Length = 1767

 Score =  139 bits (351), Expect = 2e-31
 Identities = 61/89 (68%), Positives = 82/89 (92%)
 Frame = -3

Query: 434 MSLPPVECVYVTEECLKEWKSGNPSFKLNQSVPIVRFLYELCWSMVRSDLPFQRCKLALD 255
           MSLPP+EC++VT++CL+EWKSGNPSFK++ +VP++RFLYELC ++VR +LP  +CK+ALD
Sbjct: 1   MSLPPIECIHVTDDCLREWKSGNPSFKVSGTVPMLRFLYELCSTLVRGELPLHKCKVALD 60

Query: 254 SVEFSDREADEGVASDFADIVTQMAQDVS 168
           SVEFSD+EADE +AS+FADIVTQMA D++
Sbjct: 61  SVEFSDKEADEELASNFADIVTQMALDLT 89


>emb|CAN69348.1| hypothetical protein VITISV_005799 [Vitis vinifera]
          Length = 800

 Score =  139 bits (349), Expect = 4e-31
 Identities = 61/87 (70%), Positives = 80/87 (91%)
 Frame = -3

Query: 434 MSLPPVECVYVTEECLKEWKSGNPSFKLNQSVPIVRFLYELCWSMVRSDLPFQRCKLALD 255
           MSLPP+EC++VT++CL+EWKSGNPSFK++ +VP++RFLYELC ++VR +LP  +CK+ALD
Sbjct: 1   MSLPPIECIHVTDDCLREWKSGNPSFKVSGTVPMLRFLYELCSTLVRGELPLHKCKVALD 60

Query: 254 SVEFSDREADEGVASDFADIVTQMAQD 174
           SVEFSD+EADE +AS+FADIVTQMA D
Sbjct: 61  SVEFSDKEADEELASNFADIVTQMALD 87


>ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucumis sativus]
           gi|449506883|ref|XP_004162874.1| PREDICTED: THO complex
           subunit 2-like [Cucumis sativus]
          Length = 1887

 Score =  134 bits (336), Expect = 1e-29
 Identities = 58/89 (65%), Positives = 76/89 (85%)
 Frame = -3

Query: 434 MSLPPVECVYVTEECLKEWKSGNPSFKLNQSVPIVRFLYELCWSMVRSDLPFQRCKLALD 255
           M+LPPVEC+YV E  ++EWKSGN SF++ Q VP+VRFLYELCW+MVR DLPFQ+CK ALD
Sbjct: 1   MALPPVECMYVVESNIREWKSGNSSFRVPQPVPVVRFLYELCWTMVRGDLPFQKCKAALD 60

Query: 254 SVEFSDREADEGVASDFADIVTQMAQDVS 168
           SVEFS++ + E + S FAD++TQ+AQD++
Sbjct: 61  SVEFSEKMSAEELGSTFADVITQLAQDIT 89


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