BLASTX nr result

ID: Cnidium21_contig00026874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026874
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAG27094.1| inwardly rectifying potassium channel subunit [D...   169   2e-40
ref|XP_002514366.1| Potassium channel AKT6, putative [Ricinus co...   124   1e-26
ref|XP_003609240.1| Potassium channel [Medicago truncatula] gi|3...   118   4e-25
gb|AAL25648.1|AF197332_1 inward-rectifying K+ channel [Eucalyptu...   117   1e-24
gb|AAL25649.1|AF197333_1 inward-rectifying K+ channel [Eucalyptu...   117   1e-24

>emb|CAG27094.1| inwardly rectifying potassium channel subunit [Daucus carota]
          Length = 873

 Score =  169 bits (428), Expect = 2e-40
 Identities = 85/101 (84%), Positives = 91/101 (90%), Gaps = 1/101 (0%)
 Frame = +3

Query: 81   NNFHNSLFGIMSSANDEENDLLLSVNQNRSALNV-RYVARVTVSCPQKGDVTGKLVVLPQ 257
            NNFHNSLFGIMSSA  EENDLLLSVNQNRSALNV  Y AR TVSCPQKGDVTGKLV+LPQ
Sbjct: 760  NNFHNSLFGIMSSATGEENDLLLSVNQNRSALNVAHYTARTTVSCPQKGDVTGKLVLLPQ 819

Query: 258  SFEQLHEICMKKYGFLPTQVLIKDGAEIEETELIRDGDHLV 380
            SF+QL EICMKKY F+PT+VLIKDGAEI+E  L+RDGDHLV
Sbjct: 820  SFQQLLEICMKKYRFVPTRVLIKDGAEIDEINLVRDGDHLV 860


>ref|XP_002514366.1| Potassium channel AKT6, putative [Ricinus communis]
            gi|223546822|gb|EEF48320.1| Potassium channel AKT6,
            putative [Ricinus communis]
          Length = 886

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/100 (62%), Positives = 76/100 (76%)
 Frame = +3

Query: 81   NNFHNSLFGIMSSANDEENDLLLSVNQNRSALNVRYVARVTVSCPQKGDVTGKLVVLPQS 260
            +NF+NSLFG MS AN  ENDL+ S        N  Y ARVT+SCP+KG V GKLV+LP+S
Sbjct: 778  DNFNNSLFGFMSGANAGENDLMPSSTGAAGFANFTYPARVTISCPEKGAVDGKLVLLPKS 837

Query: 261  FEQLHEICMKKYGFLPTQVLIKDGAEIEETELIRDGDHLV 380
             E+L +I  KKYGF+PT++L K+GAEIE+ ELIRDGDHLV
Sbjct: 838  LEELLDIGAKKYGFVPTKILNKEGAEIEDIELIRDGDHLV 877


>ref|XP_003609240.1| Potassium channel [Medicago truncatula] gi|355510295|gb|AES91437.1|
            Potassium channel [Medicago truncatula]
          Length = 888

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/104 (58%), Positives = 77/104 (74%), Gaps = 4/104 (3%)
 Frame = +3

Query: 81   NNFHNSLFGIMSSANDEENDLLLSVNQNRSALN----VRYVARVTVSCPQKGDVTGKLVV 248
            NNFHNSLFGIMS+A   END   SV  N +A N    V    RVT+SCP+K +V GKLV+
Sbjct: 764  NNFHNSLFGIMSAATKGENDQFFSVQTNNNARNGVKSVLRPTRVTISCPEKCEVAGKLVL 823

Query: 249  LPQSFEQLHEICMKKYGFLPTQVLIKDGAEIEETELIRDGDHLV 380
            LP+SF++L EI  KK+G + T+V+ KDGAEI++ E+IRDGDHLV
Sbjct: 824  LPESFKELLEIGSKKFGIVATKVVSKDGAEIDDIEVIRDGDHLV 867


>gb|AAL25648.1|AF197332_1 inward-rectifying K+ channel [Eucalyptus camaldulensis]
          Length = 873

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/104 (57%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
 Frame = +3

Query: 81   NNFHNSLFGIMSSANDEENDLLLSVNQNRSALNVRYVAR----VTVSCPQKGDVTGKLVV 248
            +NFHNSLFGIMS+A D E D+LLS+N N+SA N  +VAR    V VSCP+ GDV GKL++
Sbjct: 752  SNFHNSLFGIMSAARDGEGDVLLSINHNKSA-NKPFVARPAIRVVVSCPEVGDVEGKLML 810

Query: 249  LPQSFEQLHEICMKKYGFLPTQVLIKDGAEIEETELIRDGDHLV 380
            LP++F++L E+  KK+G    +VL K+GAEI++  +IRDGDHLV
Sbjct: 811  LPENFQELLEMARKKFGLTLLKVLTKNGAEIDDVAVIRDGDHLV 854


>gb|AAL25649.1|AF197333_1 inward-rectifying K+ channel [Eucalyptus camaldulensis]
          Length = 873

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/104 (57%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
 Frame = +3

Query: 81   NNFHNSLFGIMSSANDEENDLLLSVNQNRSALNVRYVAR----VTVSCPQKGDVTGKLVV 248
            +NFHNSLFGIMS+A D E D+LLS+N N+SA N  +VAR    V VSCP+ GDV GKL++
Sbjct: 752  SNFHNSLFGIMSAARDGEGDVLLSINHNKSA-NKPFVARPAIRVVVSCPEVGDVEGKLML 810

Query: 249  LPQSFEQLHEICMKKYGFLPTQVLIKDGAEIEETELIRDGDHLV 380
            LP++F++L E+  KK+G    +VL K+GAEI++  +IRDGDHLV
Sbjct: 811  LPENFQELLEMARKKFGLTLLKVLTKNGAEIDDVAVIRDGDHLV 854


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