BLASTX nr result

ID: Cnidium21_contig00026872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026872
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280592.1| PREDICTED: cyclin-A2-4 [Vitis vinifera] gi|2...   432   e-119
ref|XP_002304171.1| predicted protein [Populus trichocarpa] gi|2...   430   e-118
ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|2...   428   e-117
ref|XP_002889296.1| CYCA2_4 [Arabidopsis lyrata subsp. lyrata] g...   413   e-113
emb|CAN63857.1| hypothetical protein VITISV_017610 [Vitis vinifera]   412   e-113

>ref|XP_002280592.1| PREDICTED: cyclin-A2-4 [Vitis vinifera] gi|297743331|emb|CBI36198.3|
            unnamed protein product [Vitis vinifera]
          Length = 490

 Score =  432 bits (1112), Expect = e-119
 Identities = 218/277 (78%), Positives = 241/277 (87%)
 Frame = -3

Query: 1056 DIDSDHKDPQLCSQYAPDIYNNLRVAELMRRPDSDSMEIVQQDVTKGMRGILVDWLVEVS 877
            DIDSD KDPQLCS YAP+IYNNL VAEL RRP S+ ME VQ+D+T+ MRGILVDWLVE S
Sbjct: 214  DIDSDDKDPQLCSLYAPEIYNNLHVAELNRRPCSNFMETVQRDITQSMRGILVDWLVEAS 273

Query: 876  EEYQLVPDTLYLTVHLIDLFLSEYYIERKTLQLLGITCMLIASKYEEILAPRVEEFCFIT 697
            EEY+LVPDTLYLTVHLID FLS+ YIER+ LQLLGITCMLIASKYEEI APRVEEFC IT
Sbjct: 274  EEYKLVPDTLYLTVHLIDWFLSQNYIERQKLQLLGITCMLIASKYEEICAPRVEEFCCIT 333

Query: 696  DNTYTKTEVLTMETKVLNYLRFQLSAPTAKTFLRRYLRAAQACYKSPSLELELLSNYLAE 517
            DNTY++ EV+ ME++VLNY  F++ APTAKTFLRR+LRAAQA YK+PSLELE L NYLAE
Sbjct: 334  DNTYSRGEVVKMESQVLNYFGFKIFAPTAKTFLRRFLRAAQASYKNPSLELEYLGNYLAE 393

Query: 516  LTLIDDSFLKFIPSIVAASAVFLAKWTLDQSSHPWNPTLEHYTCYMASDLKPAVLELQRL 337
            LTLID   LK++PSI+AASAVFLA+WTLDQS HPWNPTLEHYT Y ASDLK AV  LQ L
Sbjct: 394  LTLIDYGCLKYLPSIIAASAVFLARWTLDQSGHPWNPTLEHYTRYKASDLKTAVFALQDL 453

Query: 336  QLNTSNCPLNAIRTKYRQDKFKSVADLSSPKLPETLF 226
            QLNTS CPLNAIR KYRQ+KFKSVA LSSPKL +TLF
Sbjct: 454  QLNTSGCPLNAIRGKYRQNKFKSVASLSSPKLLQTLF 490


>ref|XP_002304171.1| predicted protein [Populus trichocarpa] gi|222841603|gb|EEE79150.1|
            predicted protein [Populus trichocarpa]
          Length = 463

 Score =  430 bits (1106), Expect = e-118
 Identities = 217/280 (77%), Positives = 240/280 (85%)
 Frame = -3

Query: 1065 KFTDIDSDHKDPQLCSQYAPDIYNNLRVAELMRRPDSDSMEIVQQDVTKGMRGILVDWLV 886
            +F DIDSDHKDPQLCS YA DIYNNLRVAEL+RR     ME VQQD+T+ MRGILVDWLV
Sbjct: 184  EFIDIDSDHKDPQLCSLYAADIYNNLRVAELVRRSLPTFMETVQQDITQIMRGILVDWLV 243

Query: 885  EVSEEYQLVPDTLYLTVHLIDLFLSEYYIERKTLQLLGITCMLIASKYEEILAPRVEEFC 706
            EVSEEY+LVPDTLYLTV+LID FLS+ YIER  LQLLGITCMLIASKYEEI  P VEEFC
Sbjct: 244  EVSEEYKLVPDTLYLTVYLIDWFLSQNYIERHRLQLLGITCMLIASKYEEICPPHVEEFC 303

Query: 705  FITDNTYTKTEVLTMETKVLNYLRFQLSAPTAKTFLRRYLRAAQACYKSPSLELELLSNY 526
            FITDNTYT  EVL MET+VLN+  FQ+ APTAKTFLRR+LRAAQA YK+PS ELE L++Y
Sbjct: 304  FITDNTYTSIEVLKMETQVLNFFGFQIIAPTAKTFLRRFLRAAQASYKNPSYELEFLADY 363

Query: 525  LAELTLIDDSFLKFIPSIVAASAVFLAKWTLDQSSHPWNPTLEHYTCYMASDLKPAVLEL 346
            LAELTL+D SFL F+PS++AAS+VFLA+WTLDQ+SHPW+PTLEHY+ Y ASDLK  VL L
Sbjct: 364  LAELTLVDYSFLNFLPSVIAASSVFLARWTLDQTSHPWSPTLEHYSSYKASDLKTTVLAL 423

Query: 345  QRLQLNTSNCPLNAIRTKYRQDKFKSVADLSSPKLPETLF 226
            Q LQLNT  CPLNAIR KYRQ KFKSVA LSSPKL ETLF
Sbjct: 424  QGLQLNTKGCPLNAIRMKYRQPKFKSVAALSSPKLLETLF 463


>ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|222845390|gb|EEE82937.1|
            predicted protein [Populus trichocarpa]
          Length = 482

 Score =  428 bits (1101), Expect = e-117
 Identities = 214/280 (76%), Positives = 244/280 (87%)
 Frame = -3

Query: 1065 KFTDIDSDHKDPQLCSQYAPDIYNNLRVAELMRRPDSDSMEIVQQDVTKGMRGILVDWLV 886
            +F DIDS+HKDPQLCS YA DIY+NLRVAEL+RR   + ME VQ+D+T+ MRGIL+DWLV
Sbjct: 203  EFIDIDSNHKDPQLCSLYAADIYSNLRVAELVRRSLPNFMETVQRDITQSMRGILIDWLV 262

Query: 885  EVSEEYQLVPDTLYLTVHLIDLFLSEYYIERKTLQLLGITCMLIASKYEEILAPRVEEFC 706
            EVSEEY+LVPDTLYLTV+LID FLS+ YIER+ LQLLGITCMLIASKYEEI +PRVEEFC
Sbjct: 263  EVSEEYKLVPDTLYLTVYLIDRFLSQNYIERQRLQLLGITCMLIASKYEEICSPRVEEFC 322

Query: 705  FITDNTYTKTEVLTMETKVLNYLRFQLSAPTAKTFLRRYLRAAQACYKSPSLELELLSNY 526
            FITDNTYT  EVL MET+VLN+  FQ+ APTAKTFLRR+LRAAQA YKSPS ELE L++Y
Sbjct: 323  FITDNTYTSHEVLRMETQVLNFFGFQIFAPTAKTFLRRFLRAAQASYKSPSYELEYLADY 382

Query: 525  LAELTLIDDSFLKFIPSIVAASAVFLAKWTLDQSSHPWNPTLEHYTCYMASDLKPAVLEL 346
            LAELTL+D SFL F+PS++AAS+VFLA+WTLDQ+SHPW+PTLE YT Y ASDLK  VL +
Sbjct: 383  LAELTLVDYSFLNFLPSVIAASSVFLARWTLDQTSHPWSPTLEKYTSYKASDLKTTVLAM 442

Query: 345  QRLQLNTSNCPLNAIRTKYRQDKFKSVADLSSPKLPETLF 226
            Q LQLNTS CPLNAIR KYRQ KFKSV+ LSSPKL ETLF
Sbjct: 443  QDLQLNTSGCPLNAIRMKYRQPKFKSVSALSSPKLLETLF 482


>ref|XP_002889296.1| CYCA2_4 [Arabidopsis lyrata subsp. lyrata]
            gi|297335137|gb|EFH65555.1| CYCA2_4 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 459

 Score =  413 bits (1062), Expect = e-113
 Identities = 207/280 (73%), Positives = 234/280 (83%)
 Frame = -3

Query: 1065 KFTDIDSDHKDPQLCSQYAPDIYNNLRVAELMRRPDSDSMEIVQQDVTKGMRGILVDWLV 886
            KF DIDSD KDP LCS YAPDIY NLRVAEL RRP  D ME  Q+DVT+ MRGILVDWLV
Sbjct: 178  KFVDIDSDDKDPLLCSLYAPDIYYNLRVAELNRRPFPDFMERTQRDVTETMRGILVDWLV 237

Query: 885  EVSEEYQLVPDTLYLTVHLIDLFLSEYYIERKTLQLLGITCMLIASKYEEILAPRVEEFC 706
            EVSEEY LVPDTLYLTV+LID FL   Y+ER+ LQLLGITCMLIASKYEEI APR+EEFC
Sbjct: 238  EVSEEYTLVPDTLYLTVYLIDWFLHGNYVERQRLQLLGITCMLIASKYEEINAPRIEEFC 297

Query: 705  FITDNTYTKTEVLTMETKVLNYLRFQLSAPTAKTFLRRYLRAAQACYKSPSLELELLSNY 526
            FITDNTYT+ +VL ME++V+ +  FQ+  PT+KTFLRR+LRAAQ  + +PSLE+E L+NY
Sbjct: 298  FITDNTYTRDQVLEMESQVVKHFSFQIYTPTSKTFLRRFLRAAQVSFPNPSLEMEFLANY 357

Query: 525  LAELTLIDDSFLKFIPSIVAASAVFLAKWTLDQSSHPWNPTLEHYTCYMASDLKPAVLEL 346
            L ELTL+D  FLKF+PS++AASAVFLAKWTL+QSSHPWNPTLEHYT Y ASDLK +V  L
Sbjct: 358  LTELTLMDYPFLKFLPSVIAASAVFLAKWTLNQSSHPWNPTLEHYTTYKASDLKASVHAL 417

Query: 345  QRLQLNTSNCPLNAIRTKYRQDKFKSVADLSSPKLPETLF 226
            Q LQLNT  CPLN+IR KYRQDKFKSVA  SS +LPE LF
Sbjct: 418  QDLQLNTKGCPLNSIRMKYRQDKFKSVAVFSSGELPEKLF 457


>emb|CAN63857.1| hypothetical protein VITISV_017610 [Vitis vinifera]
          Length = 872

 Score =  412 bits (1059), Expect = e-113
 Identities = 207/271 (76%), Positives = 231/271 (85%)
 Frame = -3

Query: 1056 DIDSDHKDPQLCSQYAPDIYNNLRVAELMRRPDSDSMEIVQQDVTKGMRGILVDWLVEVS 877
            DIDSD KDPQLCS YAP+IYNNL VAEL RRP S+ ME VQ+D+T+ MRGILVDWLVEVS
Sbjct: 214  DIDSDDKDPQLCSLYAPEIYNNLHVAELNRRPCSNFMETVQRDITQSMRGILVDWLVEVS 273

Query: 876  EEYQLVPDTLYLTVHLIDLFLSEYYIERKTLQLLGITCMLIASKYEEILAPRVEEFCFIT 697
            EEY+LVPDTLYLTVHLID FLS+ YIER+ LQLLGITCMLIASKYEEI APRVEEFC IT
Sbjct: 274  EEYKLVPDTLYLTVHLIDWFLSQNYIERQKLQLLGITCMLIASKYEEICAPRVEEFCCIT 333

Query: 696  DNTYTKTEVLTMETKVLNYLRFQLSAPTAKTFLRRYLRAAQACYKSPSLELELLSNYLAE 517
            DNTY++ EV+ ME++VLNY  F++ APTAKTFLRR+LRAAQA YK+PSLELE L NYLAE
Sbjct: 334  DNTYSRGEVVKMESQVLNYFGFKIFAPTAKTFLRRFLRAAQASYKNPSLELEYLGNYLAE 393

Query: 516  LTLIDDSFLKFIPSIVAASAVFLAKWTLDQSSHPWNPTLEHYTCYMASDLKPAVLELQRL 337
            LTLID   LK++PSI+AASAVFLA+WTLDQS HPWNPTLEHYT Y ASDLK AV  LQ L
Sbjct: 394  LTLIDYGCLKYLPSIIAASAVFLARWTLDQSGHPWNPTLEHYTRYKASDLKTAVFALQDL 453

Query: 336  QLNTSNCPLNAIRTKYRQDKFKSVADLSSPK 244
            QLNTS CPLNAIR KYRQ+K   +  L  P+
Sbjct: 454  QLNTSGCPLNAIRGKYRQNKQSRILPLPXPR 484


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