BLASTX nr result

ID: Cnidium21_contig00026864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026864
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611848.1| hypothetical protein MTR_5g018540 [Medicago ...    56   4e-06

>ref|XP_003611848.1| hypothetical protein MTR_5g018540 [Medicago truncatula]
           gi|355513183|gb|AES94806.1| hypothetical protein
           MTR_5g018540 [Medicago truncatula]
          Length = 97

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = -3

Query: 359 MAYRMSKNQQEAFSETEKHSLLSGGRDDKFSSPNSSVTSHLYIKXXXXXXXXXXSGTLDK 180
           MA+ +S+    A SET+K  L     D   +   S+++S L++K            TLDK
Sbjct: 1   MAFVISR----AESETKKGGL-DHQEDKNPAREESAISSELHLKSSLSKSSSQ---TLDK 52

Query: 179 EVVLRRIRQHKCLKKVQNTFQAL--LPQPSSPQGWLDQDDVFSSP 51
           EVVLRRIR  K L ++++ F+        +  Q WL QDDVFSSP
Sbjct: 53  EVVLRRIRHQKSLNRIKSVFEGFRGCSASAQEQKWLQQDDVFSSP 97


Top