BLASTX nr result

ID: Cnidium21_contig00026846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026846
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318592.1| chromatin remodeling complex subunit [Populu...   127   3e-27
ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...   121   2e-25
ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealin...   111   2e-22
ref|XP_004138311.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealin...   110   2e-22
ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-co...   106   5e-21

>ref|XP_002318592.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222859265|gb|EEE96812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 726

 Score =  127 bits (318), Expect = 3e-27
 Identities = 85/238 (35%), Positives = 132/238 (55%), Gaps = 7/238 (2%)
 Frame = -1

Query: 698 QKLNKSLHRVSSTMNGKYDAIQEIEIDSVAHLGGTGKTYIRENELPPIASATKHSAVDRM 519
           Q LNKSLHRVSS  +GKYDA+ EI ++ +++ G + K   R +E+  +      S  D  
Sbjct: 181 QNLNKSLHRVSSITDGKYDAVPEILVERISYFGKSDKGIRRSSEVQ-VKLPDSGSVWDSQ 239

Query: 518 EFRTSIDQNLHCDQASGTVDENKRYDEENYSGINSPQKATNFH--LNEGSKGIAPETEKE 345
            F+T  ++N+        +    + D+ N   +      T+     N+  +GI+ E E  
Sbjct: 240 PFKTDDEENVML------IGSTFQTDDLNLGAVMVLDNVTDKDSVANKNLEGIS-EIEIR 292

Query: 344 ICTRLSIHSEIDVKEDNNITDRANNQYHEIAMQDNREPAEIVEA----ASVIDSLRFEVS 177
             +R+S     +  E N+ +++ N    +    ++ E A+  EA    ++ + SLRFEVS
Sbjct: 293 SSSRVSSSESSEGHEGNDQSEKENKLCVQTTETNDSELAQQNEADECWSNEVYSLRFEVS 352

Query: 176 QYSGRIHLYTCNPGVDSRPRPLFENFRPEELESQH-PSANCSKRMTYSCIKDNPKYRH 6
           +Y+GRIHLY+C  G DSRP+PL+ENF+PEELES + P+AN SK   +  +K NP  RH
Sbjct: 353 KYTGRIHLYSCILGKDSRPQPLYENFQPEELESLNLPAANDSKETDFKFLKGNPVSRH 410


>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
            gi|223546303|gb|EEF47805.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1229

 Score =  121 bits (303), Expect = 2e-25
 Identities = 95/251 (37%), Positives = 130/251 (51%), Gaps = 20/251 (7%)
 Frame = -1

Query: 698  QKLNKSLHRVSSTMNGKYDAIQEIEIDSVAHLGGTGKTYIRENELPPIASATKHSAVDRM 519
            Q LNKSLHRVSST NGKYDA+ EI +D V++L  T +     N++   AS  K SA+   
Sbjct: 670  QYLNKSLHRVSSTTNGKYDAVPEIPVDGVSYLESTSEGS-SGNQISDKASYAKLSAITED 728

Query: 518  EFRTSIDQNL-HCDQASGTVDENKRYDEENYSGINSPQKATNFHLNEGSKGIAPETEKEI 342
                   Q   + D+A+GT+ +     EE+ S   +  +  +FHL       A   +KE+
Sbjct: 729  SCTAKNMQPFENHDEAAGTLIDRS---EEHPSYGATAVQTDDFHLKVELASTA--LDKEL 783

Query: 341  CTRLSIHSEIDVKEDNNIT----DRANNQYHEIAMQDN----------REPAEIVEA--- 213
               ++   E +   D  I+    D+ N   HEI  + N            PA   EA   
Sbjct: 784  YNYIA---ESESNSDGGISSSKLDKGNGSEHEIEKEQNPLSQTKETYNHVPALGNEADET 840

Query: 212  -ASVIDSLRFEVSQYSGRIHLYTCNPGVDSRPRPLFENFRPEELESQHP-SANCSKRMTY 39
             ++ + SLRFEVS+Y+GRIHLY+C  G D RP+PLFENFRPEE+ES +   AN +     
Sbjct: 841  FSNQVYSLRFEVSKYTGRIHLYSCILGTDPRPQPLFENFRPEEIESFNSLVANNNNESAT 900

Query: 38   SCIKDNPKYRH 6
               K  P YRH
Sbjct: 901  KPFKGIPPYRH 911


>ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and
            endonuclease ZRANB3-like [Cucumis sativus]
          Length = 1241

 Score =  111 bits (277), Expect = 2e-22
 Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
 Frame = -1

Query: 698  QKLNKSLHRVSSTMNGKYDAIQEIEIDSVAHLGGTGKTYIRENE------LPPIASATKH 537
            Q LNKSL R++ST +GKYDAIQEI ++ +++L   G++            +   +  T+ 
Sbjct: 674  QNLNKSLRRITSTTDGKYDAIQEIAVEHISYLEACGRSGASSESDMNSACIELCSKGTRA 733

Query: 536  SAVDRMEFRTSIDQNLHCDQASGTVDE--NKRYDEENYSGINSPQKATNFHLNEGSKGIA 363
                 +E     + N + D  S   D+  N    E +   I     +   + +  S G +
Sbjct: 734  QGHVSLEVEVKDELNANIDYPSDQNDDIDNTTQTETDQIAIKDEMLSVLLNKDLLSMGKS 793

Query: 362  PETEKEICTRLSIH-SEIDVKEDNNITDRANNQYH---EIAMQDNREPAEIVE----AAS 207
             E   E+ TR     S   + E    +D+A  + +     +M  N EP  I+E    + +
Sbjct: 794  EENVTEVDTRSPERASSPQMDEQCGESDQAQKEENLGSGASMVHNGEPHLIIEPEKNSLN 853

Query: 206  VIDSLRFEVSQYSGRIHLYTCNPGVDSRPRPLFENFRPEELESQHPSANCSKRMTYSCIK 27
             +  LRFEVSQY+GR+HLY C PG+D RPRPLF NFRPEE+E  + S +  ++  ++   
Sbjct: 854  HVQILRFEVSQYTGRVHLYACIPGIDLRPRPLFLNFRPEEVELMNCSVDDCQKTDFNL-- 911

Query: 26   DNPKYRH 6
            D   Y+H
Sbjct: 912  DTTLYKH 918


>ref|XP_004138311.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and
            endonuclease ZRANB3-like [Cucumis sativus]
          Length = 1211

 Score =  110 bits (276), Expect = 2e-22
 Identities = 79/247 (31%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
 Frame = -1

Query: 698  QKLNKSLHRVSSTMNGKYDAIQEIEIDSVAHLGGTGKTYIRENE------LPPIASATKH 537
            Q LNKSL R++ST +GKYDAIQEI ++ +++L   G+             +   +  T+ 
Sbjct: 644  QNLNKSLRRITSTTDGKYDAIQEIAVEHISYLEACGRRNASSESDMNSACIELCSKGTRA 703

Query: 536  SAVDRMEFRTSIDQNLHCDQASGTVDE--NKRYDEENYSGINSPQKATNFHLNEGSKGIA 363
                 +E     + N + D  S   D+  N    E +   I     +   + +  S G +
Sbjct: 704  QGHVSLEVEVKDELNANIDYPSDQNDDMGNTTQTETDQIAIKDEMLSVLLNKDLLSMGKS 763

Query: 362  PETEKEICTRLSIH-SEIDVKEDNNITDRANNQYH---EIAMQDNREPAEIVE----AAS 207
             E   E+ TR     S   + E    +D+A  + +     +M  N EP  I+E    + +
Sbjct: 764  EENVTEVDTRSPERASSPQMDEQCGESDQAQKEENLGSGASMVHNGEPHLIIEPEKNSLN 823

Query: 206  VIDSLRFEVSQYSGRIHLYTCNPGVDSRPRPLFENFRPEELESQHPSANCSKRMTYSCIK 27
             +  LRFEVSQY+GR+HLY C PG+D RPRPLF NFRPEE+E  + S +  ++  ++   
Sbjct: 824  HVQILRFEVSQYTGRVHLYACIPGIDLRPRPLFLNFRPEEVELMNCSVDDCQKTDFNL-- 881

Query: 26   DNPKYRH 6
            D   Y+H
Sbjct: 882  DTTLYKH 888


>ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Glycine max]
          Length = 1193

 Score =  106 bits (264), Expect = 5e-21
 Identities = 81/260 (31%), Positives = 119/260 (45%), Gaps = 29/260 (11%)
 Frame = -1

Query: 698  QKLNKSLHRVSSTMNGKYDAIQEIEIDSVAHLGGTGKTYIRENELPPIASATKHSAVDRM 519
            + LNKSL RVS T +GKYDA++EIE++ +++L                +S    +  ++ 
Sbjct: 658  KNLNKSLQRVSCTTDGKYDAMKEIEVEGISYLD---------------SSLNSDNCEEQS 702

Query: 518  EFRTSIDQNLHCDQASGTVDENKRYDEENYSGINSPQKATNFHLNEGSKGIAPETEKEIC 339
              R ++ +          +D+    +  N S  N   K+    LN   +      E   C
Sbjct: 703  ARRDAVGET--------QLDKQPSAENSNESEANRDDKSDETFLNNSIQSSNIMAENISC 754

Query: 338  TRLSIHSEIDVKEDNNITDRAN--------NQYHEIAMQD----------NREPAEIVEA 213
              L   S +D   D ++ D           +   EI +QD          + +   +VE 
Sbjct: 755  QDLGKASVLDGTCDVDVFDGMERCPEKSFEDGDQEIRLQDLKKISTTEADDNQSVNLVEV 814

Query: 212  ----ASVIDSLRFEVSQYSGRIHLYTCNPGVDSRPRPLFENFRPEELE------SQHPSA 63
                ++ +D LRFEVS Y+GRIHLYTC  G D RP+PL ENFRPEELE           A
Sbjct: 815  NGHCSNQVDFLRFEVSPYTGRIHLYTCILGTDKRPQPLHENFRPEELELLSSVADDEKQA 874

Query: 62   NCSKRMT-YSCIKDNPKYRH 6
            +  K+ T +  +KDNP YRH
Sbjct: 875  HDEKQKTEFVTVKDNPAYRH 894


Top