BLASTX nr result

ID: Cnidium21_contig00026823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026823
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO11042.1| HD-1D [Gossypium hirsutum]                             116   2e-24
gb|AFO11041.1| HD-1A [Gossypium hirsutum]                             115   3e-24
ref|XP_002305602.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002317205.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_002518520.1| homeobox protein, putative [Ricinus communis...   107   1e-21

>gb|AFO11042.1| HD-1D [Gossypium hirsutum]
          Length = 725

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/65 (90%), Positives = 62/65 (95%)
 Frame = -3

Query: 405 ILPDGPGQNVGGILEVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKS 226
           ILPDGPG N GGILE+GSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIK+
Sbjct: 659 ILPDGPGVNGGGILEIGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKA 718

Query: 225 AVVCD 211
           AV C+
Sbjct: 719 AVKCN 723


>gb|AFO11041.1| HD-1A [Gossypium hirsutum]
          Length = 725

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/65 (89%), Positives = 62/65 (95%)
 Frame = -3

Query: 405 ILPDGPGQNVGGILEVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKS 226
           ILPDGPG N GGILE+GSGGSLLTVAFQILVDSVPTAKLSLGSV TVNSLIKCTVERIK+
Sbjct: 659 ILPDGPGVNGGGILEIGSGGSLLTVAFQILVDSVPTAKLSLGSVTTVNSLIKCTVERIKA 718

Query: 225 AVVCD 211
           AV+C+
Sbjct: 719 AVMCN 723


>ref|XP_002305602.1| predicted protein [Populus trichocarpa] gi|222848566|gb|EEE86113.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/65 (89%), Positives = 61/65 (93%)
 Frame = -3

Query: 405 ILPDGPGQNVGGILEVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKS 226
           ILPDGPG    GIL+VGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIK+
Sbjct: 659 ILPDGPGYGSAGILDVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKA 718

Query: 225 AVVCD 211
           AV+CD
Sbjct: 719 AVMCD 723


>ref|XP_002317205.1| predicted protein [Populus trichocarpa] gi|222860270|gb|EEE97817.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/65 (86%), Positives = 60/65 (92%)
 Frame = -3

Query: 405 ILPDGPGQNVGGILEVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKS 226
           ILPDGPG    GIL+VGSGGSLLTVAFQILVDSVP+ KLSLGSVATVNSLIKCTVERIK+
Sbjct: 654 ILPDGPGYGPAGILDVGSGGSLLTVAFQILVDSVPSVKLSLGSVATVNSLIKCTVERIKA 713

Query: 225 AVVCD 211
           AV+CD
Sbjct: 714 AVMCD 718


>ref|XP_002518520.1| homeobox protein, putative [Ricinus communis]
           gi|223542365|gb|EEF43907.1| homeobox protein, putative
           [Ricinus communis]
          Length = 727

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/65 (81%), Positives = 61/65 (93%)
 Frame = -3

Query: 405 ILPDGPGQNVGGILEVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKS 226
           ILPDGPG + G IL+VGSGG+L+TVAFQILVDS+PTAKLSLGSVATVN+LIKCTVERIK+
Sbjct: 661 ILPDGPGFSPGIILDVGSGGALVTVAFQILVDSIPTAKLSLGSVATVNNLIKCTVERIKA 720

Query: 225 AVVCD 211
           AV C+
Sbjct: 721 AVTCE 725


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