BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026801
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   141   1e-31
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   2e-12
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    73   5e-11
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    66   6e-09
ref|XP_002451109.1| hypothetical protein SORBIDRAFT_05g024215 [S...    65   1e-08

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  141 bits (355), Expect = 1e-31
 Identities = 69/164 (42%), Positives = 99/164 (60%)
 Frame = -1

Query: 562  HFLWRACKGSMAVKERLHQRHIAQDSTCTICGASRKTIIHTLFECKAAAVIWSHNDLACC 383
            HFLWRACKGS+AVK RL  RHI+ D+TC++CG   ++I H LF+C  A  IW  +  A  
Sbjct: 1059 HFLWRACKGSLAVKGRLFSRHISVDATCSVCGDPDESINHALFDCTFARAIWQVSGFASL 1118

Query: 382  FVDAPTNTFTARWLWLVKKLKTKDLLSVATLLWAAWFCRNKMVYEQISPDAVKVADGFVK 203
             ++AP ++F+ R  WL K    ++  ++ + +WA WFCRNK+++E    DA  VA  F K
Sbjct: 1119 MMNAPLSSFSERLEWLAKHATKEEFRTMCSFMWAGWFCRNKLIFENELSDAPLVAKRFSK 1178

Query: 202  MVDEYKVYSKRVFSSSSGSNTVRSLNSRSCPMPGCYKINTDARV 71
            +V +Y  Y+  VF  S G     +L   S P  G +K+N DA +
Sbjct: 1179 LVADYCEYAGSVFRGSGGGCGSSAL--WSPPPTGMFKVNFDAHL 1220


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
 Frame = -1

Query: 562  HFLWRACKGSMAVKERLHQRHIAQDSTCTICGASRKTIIHTLFECKAAAVIW----SHND 395
            HFLWRAC  S+ V++ L +RH+  ++ C  C    +T  H  + C  +  +W    S+  
Sbjct: 1053 HFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHLFYRCPMSLKLWEELGSYIL 1112

Query: 394  LACCFVDAPTNTFTARWLWLVKKLKTKDLLSVATLLWAAWFCRNKMVYEQISPDAVKVAD 215
            L     +A  +T   RW  +  K+  K       +LW  W  RN+ V+E  S  A  V  
Sbjct: 1113 LPGIEDEAMCDTL-VRWSQMDAKVVQKG----CYILWNVWVERNRRVFEHTSQPATVVGQ 1167

Query: 214  GFVKMVDEYKVYSKRVFSSSSGSNTVRSLNSRSCPMPGCYKINTDA 77
              ++ V+++  Y+ +++     S+   S +    P  G  K+NTDA
Sbjct: 1168 RIMRQVEDFNNYAVKIYGGMR-SSAALSPSRWYAPPVGAIKLNTDA 1212


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
 Frame = -1

Query: 562  HFLWRACKGSMAVKERLHQRHIAQDSTCTICGASRKTIIHTLFECKAAAVIWSHNDLACC 383
            HFLW+   G + V E L +R I  D  C  CGAS ++I HTLF+C  A  IW+ + +   
Sbjct: 839  HFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIWALSQIPTA 898

Query: 382  FVDAPTNTFTARWLWLVKKLKT-KDLLSVATLLWAAWFCRNKMVYEQISPDAVKVADGFV 206
                P+N+       L  ++ +  D      ++W  W  RN+ V+E +  D +++    V
Sbjct: 899  PGIFPSNSIFTNLDHLFWRIPSGVDSAPYPWIIWYIWKARNEKVFENVDKDPMEILLLAV 958

Query: 205  KMVDEYKVYSKRVFSSSSGSNTVRS 131
            K    ++     + S   GS ++ S
Sbjct: 959  KEAQSWQEAQVELHSERHGSLSIDS 983


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
 Frame = -1

Query: 562  HFLWRACKGSMAVKERLHQRHIAQDSTCTICGASRKTIIHTLFECKAAAVIWSHNDLACC 383
            HF W+   G +A  +RL  RHI  +  C  CGA  ++I H LF C  +  IW+ + +   
Sbjct: 937  HFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSS 996

Query: 382  FVDAPTNTFTARWLWLVKKLK----TKDLLSV-ATLLWAAWFCRNKMVYEQISPDAVKVA 218
                P N+    + +L+ + K     +D++ +   +LW  W  RN+ ++E +      + 
Sbjct: 997  EYIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVIL 1056

Query: 217  DGFVKMVDEYK 185
            D  ++  + +K
Sbjct: 1057 DFAIQEANVWK 1067


>ref|XP_002451109.1| hypothetical protein SORBIDRAFT_05g024215 [Sorghum bicolor]
           gi|241936952|gb|EES10097.1| hypothetical protein
           SORBIDRAFT_05g024215 [Sorghum bicolor]
          Length = 357

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 7/170 (4%)
 Frame = -1

Query: 559 FLWRACKGSMAVKERLHQRHIAQDSTCTICGASRKTIIHTLFECKAAAVIWSHND----- 395
           F WR    S+     L  +++A  + C ICGA   T IH+L +C  +  +W   D     
Sbjct: 44  FCWRLAHNSLPTGTILKNKNLAATTNCKICGAEEDTWIHSLLQCNISKCVWVLMDEDLLD 103

Query: 394 -LACCFVDAPTNTFTARWL-WLVKKLKTKDLLSVATLLWAAWFCRNKMVYEQISPDAVKV 221
            LA      P +     W+ ++   +   D + +    WA W+ R K ++++I    + +
Sbjct: 104 LLASLHFSDPKH-----WISYICCNIPKADGVRILVTCWAIWYARRKAIHDRIFQSPLSI 158

Query: 220 ADGFVKMVDEYKVYSKRVFSSSSGSNTVRSLNSRSCPMPGCYKINTDARV 71
                ++++E++   +  F          +      P  G  KINTDA +
Sbjct: 159 MMMTNRLIEEFEFVQEIDFKEKDHYQNKSTTPKLISPQNGINKINTDAAI 208