BLASTX nr result
ID: Cnidium21_contig00026801
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00026801 (691 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 141 1e-31 emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 77 2e-12 gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 73 5e-11 gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 66 6e-09 ref|XP_002451109.1| hypothetical protein SORBIDRAFT_05g024215 [S... 65 1e-08 >emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1362 Score = 141 bits (355), Expect = 1e-31 Identities = 69/164 (42%), Positives = 99/164 (60%) Frame = -1 Query: 562 HFLWRACKGSMAVKERLHQRHIAQDSTCTICGASRKTIIHTLFECKAAAVIWSHNDLACC 383 HFLWRACKGS+AVK RL RHI+ D+TC++CG ++I H LF+C A IW + A Sbjct: 1059 HFLWRACKGSLAVKGRLFSRHISVDATCSVCGDPDESINHALFDCTFARAIWQVSGFASL 1118 Query: 382 FVDAPTNTFTARWLWLVKKLKTKDLLSVATLLWAAWFCRNKMVYEQISPDAVKVADGFVK 203 ++AP ++F+ R WL K ++ ++ + +WA WFCRNK+++E DA VA F K Sbjct: 1119 MMNAPLSSFSERLEWLAKHATKEEFRTMCSFMWAGWFCRNKLIFENELSDAPLVAKRFSK 1178 Query: 202 MVDEYKVYSKRVFSSSSGSNTVRSLNSRSCPMPGCYKINTDARV 71 +V +Y Y+ VF S G +L S P G +K+N DA + Sbjct: 1179 LVADYCEYAGSVFRGSGGGCGSSAL--WSPPPTGMFKVNFDAHL 1220 >emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1357 Score = 77.4 bits (189), Expect = 2e-12 Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 4/166 (2%) Frame = -1 Query: 562 HFLWRACKGSMAVKERLHQRHIAQDSTCTICGASRKTIIHTLFECKAAAVIW----SHND 395 HFLWRAC S+ V++ L +RH+ ++ C C +T H + C + +W S+ Sbjct: 1053 HFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHLFYRCPMSLKLWEELGSYIL 1112 Query: 394 LACCFVDAPTNTFTARWLWLVKKLKTKDLLSVATLLWAAWFCRNKMVYEQISPDAVKVAD 215 L +A +T RW + K+ K +LW W RN+ V+E S A V Sbjct: 1113 LPGIEDEAMCDTL-VRWSQMDAKVVQKG----CYILWNVWVERNRRVFEHTSQPATVVGQ 1167 Query: 214 GFVKMVDEYKVYSKRVFSSSSGSNTVRSLNSRSCPMPGCYKINTDA 77 ++ V+++ Y+ +++ S+ S + P G K+NTDA Sbjct: 1168 RIMRQVEDFNNYAVKIYGGMR-SSAALSPSRWYAPPVGAIKLNTDA 1212 >gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana] Length = 1142 Score = 73.2 bits (178), Expect = 5e-11 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 1/145 (0%) Frame = -1 Query: 562 HFLWRACKGSMAVKERLHQRHIAQDSTCTICGASRKTIIHTLFECKAAAVIWSHNDLACC 383 HFLW+ G + V E L +R I D C CGAS ++I HTLF+C A IW+ + + Sbjct: 839 HFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIWALSQIPTA 898 Query: 382 FVDAPTNTFTARWLWLVKKLKT-KDLLSVATLLWAAWFCRNKMVYEQISPDAVKVADGFV 206 P+N+ L ++ + D ++W W RN+ V+E + D +++ V Sbjct: 899 PGIFPSNSIFTNLDHLFWRIPSGVDSAPYPWIIWYIWKARNEKVFENVDKDPMEILLLAV 958 Query: 205 KMVDEYKVYSKRVFSSSSGSNTVRS 131 K ++ + S GS ++ S Sbjct: 959 KEAQSWQEAQVELHSERHGSLSIDS 983 >gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1225 Score = 66.2 bits (160), Expect = 6e-09 Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 5/131 (3%) Frame = -1 Query: 562 HFLWRACKGSMAVKERLHQRHIAQDSTCTICGASRKTIIHTLFECKAAAVIWSHNDLACC 383 HF W+ G +A +RL RHI + C CGA ++I H LF C + IW+ + + Sbjct: 937 HFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSS 996 Query: 382 FVDAPTNTFTARWLWLVKKLK----TKDLLSV-ATLLWAAWFCRNKMVYEQISPDAVKVA 218 P N+ + +L+ + K +D++ + +LW W RN+ ++E + + Sbjct: 997 EYIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVIL 1056 Query: 217 DGFVKMVDEYK 185 D ++ + +K Sbjct: 1057 DFAIQEANVWK 1067 >ref|XP_002451109.1| hypothetical protein SORBIDRAFT_05g024215 [Sorghum bicolor] gi|241936952|gb|EES10097.1| hypothetical protein SORBIDRAFT_05g024215 [Sorghum bicolor] Length = 357 Score = 65.5 bits (158), Expect = 1e-08 Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 7/170 (4%) Frame = -1 Query: 559 FLWRACKGSMAVKERLHQRHIAQDSTCTICGASRKTIIHTLFECKAAAVIWSHND----- 395 F WR S+ L +++A + C ICGA T IH+L +C + +W D Sbjct: 44 FCWRLAHNSLPTGTILKNKNLAATTNCKICGAEEDTWIHSLLQCNISKCVWVLMDEDLLD 103 Query: 394 -LACCFVDAPTNTFTARWL-WLVKKLKTKDLLSVATLLWAAWFCRNKMVYEQISPDAVKV 221 LA P + W+ ++ + D + + WA W+ R K ++++I + + Sbjct: 104 LLASLHFSDPKH-----WISYICCNIPKADGVRILVTCWAIWYARRKAIHDRIFQSPLSI 158 Query: 220 ADGFVKMVDEYKVYSKRVFSSSSGSNTVRSLNSRSCPMPGCYKINTDARV 71 ++++E++ + F + P G KINTDA + Sbjct: 159 MMMTNRLIEEFEFVQEIDFKEKDHYQNKSTTPKLISPQNGINKINTDAAI 208