BLASTX nr result

ID: Cnidium21_contig00026790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026790
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329461.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-18
ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cu...    99   2e-18
ref|XP_002334559.1| predicted protein [Populus trichocarpa] gi|2...    97   7e-18
gb|ACR19031.1| TIR-NBS-LRR-type disease resistance-like protein ...    96   2e-17
ref|XP_002863204.1| hypothetical protein ARALYDRAFT_333042 [Arab...    92   2e-16

>ref|XP_002329461.1| predicted protein [Populus trichocarpa] gi|222870141|gb|EEF07272.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 73/204 (35%), Positives = 104/204 (50%), Gaps = 3/204 (1%)
 Frame = +1

Query: 7   ISGNTRFIPASVWCLHSLTNLNLSDCYLVD--LPDTIGDLSALQHLNLSRNRFYILTSTL 180
           I   T  +P S   L+ LT+L LSDC L D  LP  +G L +L  L L RN F  L + L
Sbjct: 208 IPNPTNLLPPSFHGLNRLTSLLLSDCNLSDDALPRDLGSLPSLTKLELDRNSFQSLPAGL 267

Query: 181 GQLLNLKSLTLTECEYLWAILELPPNLTDLFASSCTSIETLV-VSKLNHLRCLYLSYCSS 357
             LL LKSL L +   L  I  LP NL  L A +CTS+E L  +S  + +R LY++ C  
Sbjct: 268 SSLLRLKSLRLDDNTRLQTIPALPRNLDVLHALNCTSLERLSDISVASRMRLLYIANCPK 327

Query: 358 FVEIVGLNELKSITRIEMAGCENLLFTPEESLFQLYCGFGGRLDIYLPKIGIPHWFRFQK 537
            +E  GL++ +SI+ I+M GC ++  T + S+ +     G    + LP   IP  F ++ 
Sbjct: 328 LIEAPGLDKSRSISHIDMEGCYDISNTLKNSMHK-----GCISGLVLPGNEIPALFNYKN 382

Query: 538 PNSWIRGRIDFSMPATVSANFRGV 609
             +     I F +P     N  G+
Sbjct: 383 EGA----SILFKLPEFDGRNLNGM 402


>ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 996

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 69/181 (38%), Positives = 102/181 (56%), Gaps = 19/181 (10%)
 Frame = +1

Query: 49   LHSLTNLNLSDCY-LVDLPDT--------------IGDLSALQHLNLSRNRFYILTSTLG 183
            L +L +LNL DC  L  LP++              IG LS+L+ L+LS N F+ L ST+ 
Sbjct: 669  LKALISLNLKDCKSLNSLPNSFSNLKSLQTLIISDIGSLSSLRELDLSENLFHSLPSTIS 728

Query: 184  QLLNLKSLTLTECEYLWAILELPPNLTDLFASSCTSIE-TLVVSKLNHLRCLYLSYCSSF 360
             LL L++L L  C  L  I  LPP+L+ L+AS+CTS+E T  +S +  +  L +S C   
Sbjct: 729  GLLKLETLLLDNCPELQFIPNLPPHLSSLYASNCTSLERTSDLSNVKKMGSLSMSNCPKL 788

Query: 361  VEIVGLNE-LKSITRIEMAGCENLLFTPEESLFQ--LYCGFGGRLDIYLPKIGIPHWFRF 531
            +EI GL++ L SI  I M GC N+  + ++++ Q     GFGG   + LP   +P WF +
Sbjct: 789  MEIPGLDKLLDSIRVIHMEGCSNMSNSFKDTILQGWTVSGFGG---VCLPGKEVPDWFAY 845

Query: 532  Q 534
            +
Sbjct: 846  K 846


>ref|XP_002334559.1| predicted protein [Populus trichocarpa] gi|222873097|gb|EEF10228.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score = 97.4 bits (241), Expect = 7e-18
 Identities = 70/201 (34%), Positives = 100/201 (49%), Gaps = 3/201 (1%)
 Frame = +1

Query: 25  FIPASVWCLHSLTNLNLSDCYLV--DLPDTIGDLSALQHLNLSRNRFYILTSTLGQLLNL 198
           F+P S   L SLT L++S+ YL   D+   +G LS+LQ LNL+ N F  L +  G L  L
Sbjct: 129 FLPPSFSGLSSLTTLDISNRYLSNNDISINLGSLSSLQDLNLAGNHFSELPAGTGHLAKL 188

Query: 199 KSLTLTECEYLWAILELPPNLTDLFASSCTSIETLVVSKLNHLRCLYLSYCSSFVEIVGL 378
           + L L+ C  L  I E+P +L  L A  CTS+E + +        L L  C    EI GL
Sbjct: 189 EKLDLSRCLNLLFISEIPSSLRALVARDCTSLEKVSIQS-KTAPDLLLGGCGKLAEIQGL 247

Query: 379 NELKSITRIEMAGCENLLFTPEESLFQLYCGFGGRLDIYLPKIGIPHWF-RFQKPNSWIR 555
             +++   I M  C NL    +E L Q+    G   D+ LP   +PHWF ++Q+     R
Sbjct: 248 ESVENKPVIRMENCNNLSNNSKEILLQV-LSKGKLPDVVLPGSDVPHWFMQYQRD----R 302

Query: 556 GRIDFSMPATVSANFRGVILW 618
               F +P   +    G+I+W
Sbjct: 303 SSTKFRIPPLSAGLSPGLIVW 323


>gb|ACR19031.1| TIR-NBS-LRR-type disease resistance-like protein [Pyrus x
            bretschneideri]
          Length = 1053

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 75/237 (31%), Positives = 117/237 (49%), Gaps = 29/237 (12%)
 Frame = +1

Query: 22   RFIPASVWCLHSLTNLNLSDCYLVDLPDTIGDLSALQHLNLSRNRFYILTSTLGQLL--- 192
            R++PA  + L S+ NL+L DC L +LP+ +GD+ +L+ L+  +       + LG+L+   
Sbjct: 694  RYLPAEFYKLKSVKNLSLMDCSLRELPEGLGDMVSLRKLDADQIAIKQFPNDLGRLISLR 753

Query: 193  -------------------NLKSLTLTECEYLWAILELPPNLTDLFASSCTSIETLV-VS 312
                               NL +LT+  C  L AI +LP NL D  A  C ++ET+   S
Sbjct: 754  VLTVGSYDCCNLPSLIGLSNLVTLTVYRCRCLRAIPDLPTNLEDFIAFRCLALETMPDFS 813

Query: 313  KLNHLRCLYLSYCSSFVEIVGL---NELKSITRIEMAGCENLLFTPEESLFQLY--CGFG 477
            +L ++R L L +     E+ GL     L S+  + M  C NL     +++ Q +  CG G
Sbjct: 814  QLLNMRQLLLCFSPKVTEVPGLGLGKSLNSMVDLSMNWCTNLTAEFRKNILQGWTSCGVG 873

Query: 478  GRLDIYLPKI-GIPHWFRFQKPNSWIRGRIDFSMPATVSANFRGVILWFNVGCRTPS 645
            G   I L KI GIP WF F    +    ++ F +P     NF+G+ L + VG + P+
Sbjct: 874  G---ISLDKIHGIPEWFDFVADGN----KVSFDVPQCDGRNFKGLTLCW-VGLQFPN 922


>ref|XP_002863204.1| hypothetical protein ARALYDRAFT_333042 [Arabidopsis lyrata subsp.
            lyrata] gi|297309038|gb|EFH39463.1| hypothetical protein
            ARALYDRAFT_333042 [Arabidopsis lyrata subsp. lyrata]
          Length = 916

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
 Frame = +1

Query: 58   LTNLNLSDCYLVD--LPDTIGDLSALQHLNLSRNRFYILTSTLGQLLNLKSLTLTECEYL 231
            L  L L  C L D  +P  +G LS L+ L+L  N F  L      L +L+ L +  C  L
Sbjct: 708  LKTLRLGSCNLSDELVPKNLGSLSCLEELDLQGNNFRNLQMDFAGLSSLQILKVDSCSEL 767

Query: 232  WAILELPPNLTDLFASSCTSIE-TLVVSKLNHLRCLYLSYCSSFVEIVGLNELKSITRIE 408
             ++  LP  L   +AS+C  +E T  +S+ + L+ L+L+ C + VE  GL++LK++  I 
Sbjct: 768  QSMFSLPKRLRSFYASNCIMLERTPDLSECSVLQSLHLTNCFNLVETPGLDKLKTVGVIH 827

Query: 409  MAGCENLLFTPEESLFQLYCGFGGRLDIYLPKIGIPHWFRFQKPNSWIRGRIDFSMPATV 588
            M  C  +     ES+ Q +   G    I++P   +P+W  F+      R  I F++P ++
Sbjct: 828  MEMCNRISTDYRESIMQGWA-VGANGGIFIPGSSVPNWVSFKNE----RHSISFTVPESL 882

Query: 589  SANFRGVILW 618
            +A+  G  LW
Sbjct: 883  NADLVGFTLW 892


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