BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026786
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   283   2e-74
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   261   6e-68
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         261   6e-68
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]   259   2e-67
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...   258   5e-67

>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
           vinifera]
          Length = 978

 Score =  283 bits (724), Expect = 2e-74
 Identities = 145/211 (68%), Positives = 174/211 (82%), Gaps = 2/211 (0%)
 Frame = +3

Query: 18  GSFRGFASAAEAVVSTEDES--DEVQELINQMAREIKVVKQPKVVGEMAQGKYIVLRRRQ 191
           G  +G+ASAAEA+ S ED S  DEVQEL+ ++ +  K+ KQPK++G +AQGK+ VLRRRQ
Sbjct: 88  GYQKGYASAAEAIASEEDMSGVDEVQELVEEVNKGDKLEKQPKLIGGVAQGKHNVLRRRQ 147

Query: 192 IKMETEAWLEAAKEYQELVDDMCEQKLAPNLPYMKSLFLGWFEPLRNAIATDQESCVEGK 371
           IKMETEAW EAAKEY+EL+ DMCEQKLAPNLPY+KSLFLGWFEPLR+ IA +Q+ C +GK
Sbjct: 148 IKMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGK 207

Query: 372 HKTAYGPYFDLLPANMMAVITMHKLMGLLMTGMGSNGGCRVVTAACQIGEAIEHEVRIQN 551
           ++ AY PYFD LPA+MMAVITMHKLMGLLMTG G NG  RVV AAC IGEAIEHEVRIQ 
Sbjct: 208 NRAAYAPYFDHLPADMMAVITMHKLMGLLMTGEG-NGSARVVQAACHIGEAIEHEVRIQR 266

Query: 552 FLDKTKKKPASSKDINKESDSPTEQQEKLRK 644
           F++KTKKK ASS + +  S+  T++QEKLRK
Sbjct: 267 FMEKTKKKSASSNNPDGGSNPVTKEQEKLRK 297


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial;
           AltName: Full=NictaRpoT1-tom; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 1B;
           Flags: Precursor
          Length = 1002

 Score =  261 bits (668), Expect = 6e-68
 Identities = 138/216 (63%), Positives = 162/216 (75%), Gaps = 7/216 (3%)
 Frame = +3

Query: 18  GSFRGFASAAEAVVSTEDES-DEVQELINQMAREIKVVK------QPKVVGEMAQGKYIV 176
           G  R + SAAEA+VST +E  DE+QELI +M +E + +K      QPK +G M  GKY  
Sbjct: 109 GRLRSYGSAAEAIVSTSEEDIDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNF 168

Query: 177 LRRRQIKMETEAWLEAAKEYQELVDDMCEQKLAPNLPYMKSLFLGWFEPLRNAIATDQES 356
           LRRRQIK+ETEAW EAAKEYQEL+ DMCEQKLAPNLPYMKSLFLGWFEPLR+AIA +Q+ 
Sbjct: 169 LRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKL 228

Query: 357 CVEGKHKTAYGPYFDLLPANMMAVITMHKLMGLLMTGMGSNGGCRVVTAACQIGEAIEHE 536
           C EGK++ AY P+FD LPA MMAVITMHKLMGLLMTG G  G  RVV AA  IGEAIEHE
Sbjct: 229 CDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTG-GGTGSARVVQAASYIGEAIEHE 287

Query: 537 VRIQNFLDKTKKKPASSKDINKESDSPTEQQEKLRK 644
            RI  FL+KTKK  A S D+ +      +++E+LRK
Sbjct: 288 ARIHRFLEKTKKSNALSGDLEETPGDMMKERERLRK 323


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  261 bits (668), Expect = 6e-68
 Identities = 138/216 (63%), Positives = 162/216 (75%), Gaps = 7/216 (3%)
 Frame = +3

Query: 18  GSFRGFASAAEAVVSTEDES-DEVQELINQMAREIKVVK------QPKVVGEMAQGKYIV 176
           G  R + SAAEA+VST +E  DE+QELI +M +E + +K      QPK +G M  GKY  
Sbjct: 109 GRLRSYGSAAEAIVSTSEEDIDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNF 168

Query: 177 LRRRQIKMETEAWLEAAKEYQELVDDMCEQKLAPNLPYMKSLFLGWFEPLRNAIATDQES 356
           LRRRQIK+ETEAW EAAKEYQEL+ DMCEQKLAPNLPYMKSLFLGWFEPLR+AIA +Q+ 
Sbjct: 169 LRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKL 228

Query: 357 CVEGKHKTAYGPYFDLLPANMMAVITMHKLMGLLMTGMGSNGGCRVVTAACQIGEAIEHE 536
           C EGK++ AY P+FD LPA MMAVITMHKLMGLLMTG G  G  RVV AA  IGEAIEHE
Sbjct: 229 CDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTG-GGTGSARVVQAASYIGEAIEHE 287

Query: 537 VRIQNFLDKTKKKPASSKDINKESDSPTEQQEKLRK 644
            RI  FL+KTKK  A S D+ +      +++E+LRK
Sbjct: 288 ARIHRFLEKTKKSNALSGDLEETPGDMMKERERLRK 323


>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  259 bits (663), Expect = 2e-67
 Identities = 137/216 (63%), Positives = 161/216 (74%), Gaps = 7/216 (3%)
 Frame = +3

Query: 18  GSFRGFASAAEAVVSTEDES-DEVQELINQMAREIKVVK------QPKVVGEMAQGKYIV 176
           G  R + SAAEA+ ST +E  DE+QELI +M +E + +K      QPK +G M  GKY +
Sbjct: 109 GFLRSYGSAAEAIASTSEEDIDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNL 168

Query: 177 LRRRQIKMETEAWLEAAKEYQELVDDMCEQKLAPNLPYMKSLFLGWFEPLRNAIATDQES 356
           LRRRQIK+ETEAW EAAKEYQEL+ DMCEQKLAPNLPYMKSLFLGWFEPLR+AIA +Q+ 
Sbjct: 169 LRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKL 228

Query: 357 CVEGKHKTAYGPYFDLLPANMMAVITMHKLMGLLMTGMGSNGGCRVVTAACQIGEAIEHE 536
           C EGK++ AY P+FD LPA MMAVITMHKLMGLLMTG G  G  RVV AA  IGEAIEHE
Sbjct: 229 CDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTG-GGTGSARVVQAASHIGEAIEHE 287

Query: 537 VRIQNFLDKTKKKPASSKDINKESDSPTEQQEKLRK 644
            RI  FL+KTKK  A S D+        +++E+LRK
Sbjct: 288 ARIHRFLEKTKKSNALSGDLEDTPGDIMKERERLRK 323


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial;
           AltName: Full=NsRpoT-A; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 1;
           Flags: Precursor gi|15824083|dbj|BAB69431.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1002

 Score =  258 bits (660), Expect = 5e-67
 Identities = 136/216 (62%), Positives = 161/216 (74%), Gaps = 7/216 (3%)
 Frame = +3

Query: 18  GSFRGFASAAEAVVSTEDES-DEVQELINQMAREIKVVK------QPKVVGEMAQGKYIV 176
           G  R + SAAEA+ ST +E  DE+QELI +M +E + +K      QPK +G M  GKY +
Sbjct: 109 GFLRSYGSAAEAIASTSEEDIDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNL 168

Query: 177 LRRRQIKMETEAWLEAAKEYQELVDDMCEQKLAPNLPYMKSLFLGWFEPLRNAIATDQES 356
           LRRRQIK+ETEAW EAAKEYQEL+ DMCEQKLAPNLPYMKSLFLGWFEPLR+AIA +Q+ 
Sbjct: 169 LRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKL 228

Query: 357 CVEGKHKTAYGPYFDLLPANMMAVITMHKLMGLLMTGMGSNGGCRVVTAACQIGEAIEHE 536
           C EGK++ AY P+FD LPA MMAVITMHKLMGLLMTG G  G  RVV AA  IGEAIEHE
Sbjct: 229 CDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTG-GGTGSARVVQAASHIGEAIEHE 287

Query: 537 VRIQNFLDKTKKKPASSKDINKESDSPTEQQEKLRK 644
            RI  FL+KTKK  A S D+        +++E++RK
Sbjct: 288 ARIHRFLEKTKKSNALSGDLEDTPGDIMKERERVRK 323