BLASTX nr result

ID: Cnidium21_contig00026760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026760
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525210.1| zinc finger protein, putative [Ricinus commu...    60   2e-07
ref|XP_002870987.1| zinc finger family protein [Arabidopsis lyra...    56   3e-06
ref|XP_002308497.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002525210.1| zinc finger protein, putative [Ricinus communis]
           gi|223535507|gb|EEF37176.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 275

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/123 (31%), Positives = 54/123 (43%)
 Frame = +1

Query: 55  SVFMDALSTLTPPHLSHLIASISALFQRHNRRLATLLSSPALFXXXXXXXXXXXXXXXXX 234
           ++ M ALSTLTPP LSHL  SI +    H+  L++LLSSP+ F                 
Sbjct: 5   TMIMAALSTLTPPQLSHLTHSILSQTLHHHHSLSSLLSSPSSFSLTLHHLHSLSLPHKTL 64

Query: 235 XIGQHILSYLTHLTHFMHTNTSAPSYSANNMKXXXXXXXXXXXXXXXXRQHDPSALEVEP 414
            I +H+LS L  LT F      +PS+ +  +K                 QH+P  L    
Sbjct: 65  LIAKHLLSSLHQLTRFF----PSPSHPSATIKHRDLDAVLLLLLLCDVHQHNPDLLRTPR 120

Query: 415 SKW 423
            +W
Sbjct: 121 DEW 123


>ref|XP_002870987.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316824|gb|EFH47246.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 283

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/127 (30%), Positives = 52/127 (40%)
 Frame = +1

Query: 43  ENHYSVFMDALSTLTPPHLSHLIASISALFQRHNRRLATLLSSPALFXXXXXXXXXXXXX 222
           E + ++ M +LSTL+P HL++L  SI ++   H RRLAT+LSSP LF             
Sbjct: 3   EGNITIIMASLSTLSPSHLTNLTHSILSISHHHRRRLATVLSSPTLFSLTLRHLLSLSLP 62

Query: 223 XXXXXIGQHILSYLTHLTHFMHTNTSAPSYSANNMKXXXXXXXXXXXXXXXXRQHDPSAL 402
                I  H+LS    L H +  +    S S   MK                 Q  P  L
Sbjct: 63  DKTHLIANHLLS----LLHPLLIHRKHHSSSTVTMKLRDLDAVVLLLFLCETHQLHPDVL 118

Query: 403 EVEPSKW 423
           E     W
Sbjct: 119 EASADNW 125


>ref|XP_002308497.1| predicted protein [Populus trichocarpa] gi|222854473|gb|EEE92020.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/123 (28%), Positives = 51/123 (41%)
 Frame = +1

Query: 55  SVFMDALSTLTPPHLSHLIASISALFQRHNRRLATLLSSPALFXXXXXXXXXXXXXXXXX 234
           ++   ALSTL  P L+ L +SI +L   H+ RL++LL SP+LF                 
Sbjct: 5   TIITAALSTLASPQLTDLTSSILSLTLHHHSRLSSLLCSPSLFSLALHHLHSLSLAHKTL 64

Query: 235 XIGQHILSYLTHLTHFMHTNTSAPSYSANNMKXXXXXXXXXXXXXXXXRQHDPSALEVEP 414
            I +++LS L HLT   H  T  P +    +K                 Q  P  L+   
Sbjct: 65  LIAKYLLSSLHHLTRHFHPPTLIPPHPTTTIKHRDLDAALLLIFLCDVHQESPEILKTPR 124

Query: 415 SKW 423
           + W
Sbjct: 125 TGW 127


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