BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026710
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...   304   6e-81
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...   299   1e-79
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ...   295   2e-78
ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   293   1e-77
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...   293   1e-77

>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score =  304 bits (778), Expect = 6e-81
 Identities = 145/169 (85%), Positives = 161/169 (95%)
 Frame = +3

Query: 3    VRFDKRNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQ 182
            +R +KRN KLEATHLEKAKELYT+VLVQH +NLYAANGAGVVLAEKGH+DV+K+L TQVQ
Sbjct: 640  IRNEKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQ 699

Query: 183  EAASGSIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYE 362
            EAASGSIFVQMP VWINLAH++FAQG+FALA+KMYQNCL++FFYNTDS +LLYLARTHYE
Sbjct: 700  EAASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYE 759

Query: 363  AEQWQDCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEE 509
            AEQWQDCKRTLLRAIHL PSNYTLRFDAGV +QKFSASTLQKTKRTV+E
Sbjct: 760  AEQWQDCKRTLLRAIHLTPSNYTLRFDAGVAMQKFSASTLQKTKRTVDE 808


>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score =  299 bits (766), Expect = 1e-79
 Identities = 142/169 (84%), Positives = 160/169 (94%)
 Frame = +3

Query: 3    VRFDKRNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQ 182
            +R +KR  KLEATHLEKAKELYT+VLVQH +NLYAANGAGVVLAEKGH+DV+K++ TQVQ
Sbjct: 643  IRSEKRAPKLEATHLEKAKELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQ 702

Query: 183  EAASGSIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYE 362
            EAASGS+FVQMP VWINLAH++FAQG+FALA+KMYQNCLR+F+YNTDS VLLYLARTHYE
Sbjct: 703  EAASGSVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYE 762

Query: 363  AEQWQDCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEE 509
            AEQWQDCK+TLLRAIHLAPSNYTLRFDAGV +QKFSASTLQKTKRT +E
Sbjct: 763  AEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADE 811


>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
            gi|223544778|gb|EEF46294.1| tpr repeat nuclear
            phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score =  295 bits (756), Expect = 2e-78
 Identities = 140/169 (82%), Positives = 160/169 (94%)
 Frame = +3

Query: 3    VRFDKRNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQ 182
            +R +KRN KLEATHLEKAKELYT+VLVQH +NLYAANGAGVVLAEKGH+DV+K+L  +VQ
Sbjct: 616  IRNEKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFMEVQ 675

Query: 183  EAASGSIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYE 362
            EAASGSIFVQMP VWINLAH++FAQG+FALA+KMYQNCLR+F+Y+TDS +LLYLARTHYE
Sbjct: 676  EAASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYYSTDSQILLYLARTHYE 735

Query: 363  AEQWQDCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEE 509
            AEQWQ+CK+TLLRAIHLAPSNY LRFDAGV +QKFSASTLQKTKRTV+E
Sbjct: 736  AEQWQECKKTLLRAIHLAPSNYILRFDAGVAMQKFSASTLQKTKRTVDE 784


>ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
            CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score =  293 bits (750), Expect = 1e-77
 Identities = 137/169 (81%), Positives = 160/169 (94%)
 Frame = +3

Query: 3    VRFDKRNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQ 182
            +R +KRN KLEATHLEK+KELYT+VLVQHP+NLYAANGAGV+LAEKG +DV+K++ TQVQ
Sbjct: 616  LRNEKRNPKLEATHLEKSKELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQ 675

Query: 183  EAASGSIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYE 362
            EAASG+IFVQMP VWINLAH++FAQG+F+LA+KMYQNCLR+F+YNTD  +LLYLART+YE
Sbjct: 676  EAASGNIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYE 735

Query: 363  AEQWQDCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEE 509
            AEQWQDCK+TLLRAIHLAPSNYTLRFDAGV +QKFSASTLQKTKRT +E
Sbjct: 736  AEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADE 784


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            sativus]
          Length = 1074

 Score =  293 bits (750), Expect = 1e-77
 Identities = 137/169 (81%), Positives = 160/169 (94%)
 Frame = +3

Query: 3    VRFDKRNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQ 182
            +R +KRN KLEATHLEK+KELYT+VLVQHP+NLYAANGAGV+LAEKG +DV+K++ TQVQ
Sbjct: 640  LRNEKRNPKLEATHLEKSKELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQ 699

Query: 183  EAASGSIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYE 362
            EAASG+IFVQMP VWINLAH++FAQG+F+LA+KMYQNCLR+F+YNTD  +LLYLART+YE
Sbjct: 700  EAASGNIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYE 759

Query: 363  AEQWQDCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEE 509
            AEQWQDCK+TLLRAIHLAPSNYTLRFDAGV +QKFSASTLQKTKRT +E
Sbjct: 760  AEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADE 808