BLASTX nr result
ID: Cnidium21_contig00026710
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00026710 (509 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]... 304 6e-81 ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein... 299 1e-79 ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ... 295 2e-78 ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 293 1e-77 ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein... 293 1e-77 >ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa] gi|222833309|gb|EEE71786.1| PAF1 complex component [Populus trichocarpa] Length = 1056 Score = 304 bits (778), Expect = 6e-81 Identities = 145/169 (85%), Positives = 161/169 (95%) Frame = +3 Query: 3 VRFDKRNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQ 182 +R +KRN KLEATHLEKAKELYT+VLVQH +NLYAANGAGVVLAEKGH+DV+K+L TQVQ Sbjct: 640 IRNEKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQ 699 Query: 183 EAASGSIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYE 362 EAASGSIFVQMP VWINLAH++FAQG+FALA+KMYQNCL++FFYNTDS +LLYLARTHYE Sbjct: 700 EAASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYE 759 Query: 363 AEQWQDCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEE 509 AEQWQDCKRTLLRAIHL PSNYTLRFDAGV +QKFSASTLQKTKRTV+E Sbjct: 760 AEQWQDCKRTLLRAIHLTPSNYTLRFDAGVAMQKFSASTLQKTKRTVDE 808 >ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis vinifera] gi|297738576|emb|CBI27821.3| unnamed protein product [Vitis vinifera] Length = 1091 Score = 299 bits (766), Expect = 1e-79 Identities = 142/169 (84%), Positives = 160/169 (94%) Frame = +3 Query: 3 VRFDKRNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQ 182 +R +KR KLEATHLEKAKELYT+VLVQH +NLYAANGAGVVLAEKGH+DV+K++ TQVQ Sbjct: 643 IRSEKRAPKLEATHLEKAKELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQ 702 Query: 183 EAASGSIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYE 362 EAASGS+FVQMP VWINLAH++FAQG+FALA+KMYQNCLR+F+YNTDS VLLYLARTHYE Sbjct: 703 EAASGSVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYE 762 Query: 363 AEQWQDCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEE 509 AEQWQDCK+TLLRAIHLAPSNYTLRFDAGV +QKFSASTLQKTKRT +E Sbjct: 763 AEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADE 811 >ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis] gi|223544778|gb|EEF46294.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis] Length = 1065 Score = 295 bits (756), Expect = 2e-78 Identities = 140/169 (82%), Positives = 160/169 (94%) Frame = +3 Query: 3 VRFDKRNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQ 182 +R +KRN KLEATHLEKAKELYT+VLVQH +NLYAANGAGVVLAEKGH+DV+K+L +VQ Sbjct: 616 IRNEKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFMEVQ 675 Query: 183 EAASGSIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYE 362 EAASGSIFVQMP VWINLAH++FAQG+FALA+KMYQNCLR+F+Y+TDS +LLYLARTHYE Sbjct: 676 EAASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYYSTDSQILLYLARTHYE 735 Query: 363 AEQWQDCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEE 509 AEQWQ+CK+TLLRAIHLAPSNY LRFDAGV +QKFSASTLQKTKRTV+E Sbjct: 736 AEQWQECKKTLLRAIHLAPSNYILRFDAGVAMQKFSASTLQKTKRTVDE 784 >ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog [Cucumis sativus] Length = 1050 Score = 293 bits (750), Expect = 1e-77 Identities = 137/169 (81%), Positives = 160/169 (94%) Frame = +3 Query: 3 VRFDKRNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQ 182 +R +KRN KLEATHLEK+KELYT+VLVQHP+NLYAANGAGV+LAEKG +DV+K++ TQVQ Sbjct: 616 LRNEKRNPKLEATHLEKSKELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQ 675 Query: 183 EAASGSIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYE 362 EAASG+IFVQMP VWINLAH++FAQG+F+LA+KMYQNCLR+F+YNTD +LLYLART+YE Sbjct: 676 EAASGNIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYE 735 Query: 363 AEQWQDCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEE 509 AEQWQDCK+TLLRAIHLAPSNYTLRFDAGV +QKFSASTLQKTKRT +E Sbjct: 736 AEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADE 784 >ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis sativus] Length = 1074 Score = 293 bits (750), Expect = 1e-77 Identities = 137/169 (81%), Positives = 160/169 (94%) Frame = +3 Query: 3 VRFDKRNAKLEATHLEKAKELYTKVLVQHPSNLYAANGAGVVLAEKGHYDVAKELLTQVQ 182 +R +KRN KLEATHLEK+KELYT+VLVQHP+NLYAANGAGV+LAEKG +DV+K++ TQVQ Sbjct: 640 LRNEKRNPKLEATHLEKSKELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQ 699 Query: 183 EAASGSIFVQMPGVWINLAHIHFAQGDFALAIKMYQNCLRRFFYNTDSNVLLYLARTHYE 362 EAASG+IFVQMP VWINLAH++FAQG+F+LA+KMYQNCLR+F+YNTD +LLYLART+YE Sbjct: 700 EAASGNIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYE 759 Query: 363 AEQWQDCKRTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLQKTKRTVEE 509 AEQWQDCK+TLLRAIHLAPSNYTLRFDAGV +QKFSASTLQKTKRT +E Sbjct: 760 AEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADE 808