BLASTX nr result

ID: Cnidium21_contig00026633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026633
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]               102   3e-20
ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|3...   101   5e-20
ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|3...   101   5e-20
ref|NP_001235545.1| uncharacterized protein LOC100527656 [Glycin...   101   5e-20
gb|ACU16283.1| unknown [Glycine max]                                  101   5e-20

>gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]
          Length = 176

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/72 (66%), Positives = 51/72 (70%)
 Frame = +3

Query: 201 MQSQLVCRGCRTMLLYPQGXXXXXXXXXXXXXXXXXXGMEMSQLICGGCRTLLMYTRGAS 380
           MQSQLVC GCR MLLYP+G                  GM+MSQL CGGCRTLLMYTRGA+
Sbjct: 1   MQSQLVCNGCRNMLLYPRGATNVCCALCNTISPVPPPGMDMSQLYCGGCRTLLMYTRGAT 60

Query: 381 SVRCSCCHTVNL 416
           SVRCSCCHTVNL
Sbjct: 61  SVRCSCCHTVNL 72


>ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|355524035|gb|AET04489.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 223

 Score =  101 bits (252), Expect = 5e-20
 Identities = 48/73 (65%), Positives = 51/73 (69%)
 Frame = +3

Query: 198 AMQSQLVCRGCRTMLLYPQGXXXXXXXXXXXXXXXXXXGMEMSQLICGGCRTLLMYTRGA 377
           AMQSQLVC GCR  LLYP+G                  GM+MSQL CGGCRTLLMYTRGA
Sbjct: 47  AMQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGA 106

Query: 378 SSVRCSCCHTVNL 416
           +SVRCSCCHTVNL
Sbjct: 107 TSVRCSCCHTVNL 119


>ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|355524034|gb|AET04488.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 211

 Score =  101 bits (252), Expect = 5e-20
 Identities = 48/73 (65%), Positives = 51/73 (69%)
 Frame = +3

Query: 198 AMQSQLVCRGCRTMLLYPQGXXXXXXXXXXXXXXXXXXGMEMSQLICGGCRTLLMYTRGA 377
           AMQSQLVC GCR  LLYP+G                  GM+MSQL CGGCRTLLMYTRGA
Sbjct: 35  AMQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGA 94

Query: 378 SSVRCSCCHTVNL 416
           +SVRCSCCHTVNL
Sbjct: 95  TSVRCSCCHTVNL 107


>ref|NP_001235545.1| uncharacterized protein LOC100527656 [Glycine max]
           gi|255632868|gb|ACU16787.1| unknown [Glycine max]
          Length = 175

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/72 (65%), Positives = 52/72 (72%)
 Frame = +3

Query: 201 MQSQLVCRGCRTMLLYPQGXXXXXXXXXXXXXXXXXXGMEMSQLICGGCRTLLMYTRGAS 380
           MQSQ+VC GCR++LLYP+G                  GMEMSQL CGGCRTLLMYTRGA+
Sbjct: 1   MQSQVVCNGCRSLLLYPRGATNVCCALCNTITSVSPPGMEMSQLYCGGCRTLLMYTRGAT 60

Query: 381 SVRCSCCHTVNL 416
           SVRCSCCHTVNL
Sbjct: 61  SVRCSCCHTVNL 72


>gb|ACU16283.1| unknown [Glycine max]
          Length = 179

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/72 (65%), Positives = 52/72 (72%)
 Frame = +3

Query: 201 MQSQLVCRGCRTMLLYPQGXXXXXXXXXXXXXXXXXXGMEMSQLICGGCRTLLMYTRGAS 380
           MQSQ+VC GCR++LLYP+G                  GMEMSQL CGGCRTLLMYTRGA+
Sbjct: 1   MQSQVVCNGCRSLLLYPRGATNVCCALCNTIASVPPPGMEMSQLYCGGCRTLLMYTRGAT 60

Query: 381 SVRCSCCHTVNL 416
           SVRCSCCHTVNL
Sbjct: 61  SVRCSCCHTVNL 72


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