BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026623
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
ref|XP_002314384.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
ref|XP_002882500.1| pentatricopeptide repeat-containing protein ...   167   8e-40
ref|XP_002862796.1| hypothetical protein ARALYDRAFT_359368 [Arab...   167   8e-40
ref|NP_187348.1| pentatricopeptide repeat-containing protein [Ar...   167   8e-40

>ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/94 (87%), Positives = 87/94 (92%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           GRVDAALSLLDEMKSNS DADIVLYNVCID FGK GKVD++WKFFHEMK+HGL PDDVTY
Sbjct: 244 GRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTY 303

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQNRKVPCAYA 1
           TSMIGVLCKA RLDEAV +FE +EQNRKVPCAYA
Sbjct: 304 TSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYA 337



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/89 (35%), Positives = 53/89 (59%)
 Frame = -2

Query: 279 RVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTYT 100
           R+D A  L +E KSN    ++V+Y+  ID FGKVG++D A+    E+   GL+P+  T+ 
Sbjct: 664 RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 723

Query: 99  SMIGVLCKAYRLDEAVNMFEHMEQNRKVP 13
            ++  L KA  ++EA+  F+ M+  +  P
Sbjct: 724 CLLDALVKAEEINEALICFQSMKDLKCPP 752



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/86 (41%), Positives = 43/86 (50%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G  +    L   MK   C  D   YN  ID F K GKV+ A++   EMK  G  P  VTY
Sbjct: 593 GLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTY 652

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQN 25
            S+I  L K  RLDEA  +FE  + N
Sbjct: 653 GSVIDGLAKIDRLDEAYMLFEEAKSN 678



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/93 (34%), Positives = 49/93 (52%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G+V+ A  LL+EMK       +V Y   ID   K+ ++D A+  F E K++G+  + V Y
Sbjct: 628 GKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVY 687

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQNRKVPCAY 4
           +S+I    K  R+DEA  + E + Q    P  Y
Sbjct: 688 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 720



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/91 (36%), Positives = 54/91 (59%)
 Frame = -2

Query: 279 RVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTYT 100
           RV+ AL + +EMK ++   ++  YN+ ID   + GK++ A +   +M+  GL P+ +T  
Sbjct: 385 RVEEALRIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVN 443

Query: 99  SMIGVLCKAYRLDEAVNMFEHMEQNRKVPCA 7
            MI  LCKA +L+EA ++FE M+     P A
Sbjct: 444 IMIDRLCKAQKLEEACSIFEGMDDKVCTPNA 474


>ref|XP_002314384.1| predicted protein [Populus trichocarpa] gi|222863424|gb|EEF00555.1|
           predicted protein [Populus trichocarpa]
          Length = 764

 Score =  169 bits (427), Expect = 3e-40
 Identities = 81/94 (86%), Positives = 87/94 (92%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           GRVDAALSLLDEMKSN+ DADIVLYNVCID FGKVGKVD+AWKFFHEMK +GL PDDVTY
Sbjct: 110 GRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTY 169

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQNRKVPCAYA 1
           TSM+GVLCKA RLDEAV +FE MEQNR+VPCAYA
Sbjct: 170 TSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYA 203



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/89 (38%), Positives = 53/89 (59%)
 Frame = -2

Query: 279 RVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTYT 100
           R+D A  L +E KSN  + + V+Y+  ID FGKVG+VD A+    EM   GL+P+  T+ 
Sbjct: 530 RLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWN 589

Query: 99  SMIGVLCKAYRLDEAVNMFEHMEQNRKVP 13
            ++  L KA  ++EA+  F+ M+  +  P
Sbjct: 590 CLLDGLVKAEEINEALVCFQSMKDLKCTP 618



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/74 (45%), Positives = 41/74 (55%)
 Frame = -2

Query: 246 MKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTYTSMIGVLCKAYR 67
           MK   C  D   YN  ID F K GKV+ A++   EMKT G  P  VTY S++  L K  R
Sbjct: 471 MKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDR 530

Query: 66  LDEAVNMFEHMEQN 25
           LDEA  +FE  + N
Sbjct: 531 LDEAYMLFEEAKSN 544



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/93 (34%), Positives = 50/93 (53%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G+V+ A  LL+EMK+      +V Y   +D   K+ ++D A+  F E K++G+  + V Y
Sbjct: 494 GKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIY 553

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQNRKVPCAY 4
           +S+I    K  R+DEA  + E M Q    P  Y
Sbjct: 554 SSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVY 586



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/85 (36%), Positives = 48/85 (56%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G+ D A SLL+  ++  C   +V YN  +   GK GK D A + F EMK   + P+  TY
Sbjct: 215 GKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTY 273

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQ 28
             +IG+LCKA  ++ A  + + M++
Sbjct: 274 NIIIGMLCKAGNVEAAFKVRDAMKE 298



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/84 (40%), Positives = 49/84 (58%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G+ D AL + +EMK ++   ++  YN+ I    K G V+ A+K    MK  GL P+  T 
Sbjct: 250 GKTDKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTI 308

Query: 102 TSMIGVLCKAYRLDEAVNMFEHME 31
             MI  LCKA +LDEA ++FE M+
Sbjct: 309 NIMIDRLCKAQKLDEACSIFEGMD 332



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/88 (31%), Positives = 48/88 (54%)
 Frame = -2

Query: 276 VDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTYTS 97
           ++ AL     MK   C  + + Y + I+   KV K + A+ F+ EM+  GL P+ +TYT+
Sbjct: 601 INEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTA 660

Query: 96  MIGVLCKAYRLDEAVNMFEHMEQNRKVP 13
           MI  L K+  + +A ++FE    +  +P
Sbjct: 661 MISGLAKSGNVAQASSLFERFRASGGIP 688


>ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328340|gb|EFH58759.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 871

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/94 (82%), Positives = 88/94 (93%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           GRVD+ALSLLDEMKS+S DADIVLYNVCIDSFGKVGKVD+AWKFFHE++ +GL PD+VTY
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQNRKVPCAYA 1
           TSMIGVLCKA RLDEAV MFEH+E+NR+VPC YA
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/89 (35%), Positives = 55/89 (61%)
 Frame = -2

Query: 279 RVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTYT 100
           R+D A  L +E KS   + ++V+Y+  ID FGKVG++D A+    E+   GL+P+  T+ 
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWN 696

Query: 99  SMIGVLCKAYRLDEAVNMFEHMEQNRKVP 13
           S++  L KA  ++EA+  F+ M++ +  P
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTP 725



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/87 (42%), Positives = 45/87 (51%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G  +    L   MK   C  D   YN+ ID F K GKV+ A++   EMKT G  P  VTY
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQNR 22
            S+I  L K  RLDEA  +FE  +  R
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSKR 652



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/84 (38%), Positives = 51/84 (60%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G+VD AL + +EMK ++   ++  YN+ ID   + GK+D A++    M+  GL P+  T 
Sbjct: 357 GKVDEALRVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTV 415

Query: 102 TSMIGVLCKAYRLDEAVNMFEHME 31
             M+  LCK+ +LDEA  +FE M+
Sbjct: 416 NIMVDRLCKSQKLDEACAIFEQMD 439



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/93 (33%), Positives = 49/93 (52%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G+V+ A  LL+EMK+   +  +V Y   ID   K+ ++D A+  F E K+  +  + V Y
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQNRKVPCAY 4
           +S+I    K  R+DEA  + E + Q    P  Y
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNVY 693



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/85 (34%), Positives = 48/85 (56%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G+ D A SLL+  ++      ++ YN  +    K+GKVD A + F EMK    +P+  TY
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTY 380

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQ 28
             +I +LC+A +LD A  + + M++
Sbjct: 381 NILIDMLCRAGKLDCAFELRDSMQK 405


>ref|XP_002862796.1| hypothetical protein ARALYDRAFT_359368 [Arabidopsis lyrata subsp.
           lyrata] gi|297308523|gb|EFH39054.1| hypothetical protein
           ARALYDRAFT_359368 [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/94 (82%), Positives = 88/94 (93%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           GRVD+ALSLLDEMKS+S DADIVLYNVCIDSFGKVGKVD+AWKFFHE++ +GL PD+VTY
Sbjct: 231 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 290

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQNRKVPCAYA 1
           TSMIGVLCKA RLDEAV MFEH+E+NR+VPC YA
Sbjct: 291 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 324


>ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75186627|sp|Q9M907.1|PP217_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g06920 gi|6728999|gb|AAF26996.1|AC016827_7
           hypothetical protein [Arabidopsis thaliana]
           gi|332640955|gb|AEE74476.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/94 (82%), Positives = 88/94 (93%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           GRVD+ALSLLDEMKS+S DADIVLYNVCIDSFGKVGKVD+AWKFFHE++ +GL PD+VTY
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQNRKVPCAYA 1
           TSMIGVLCKA RLDEAV MFEH+E+NR+VPC YA
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/89 (35%), Positives = 55/89 (61%)
 Frame = -2

Query: 279 RVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTYT 100
           R+D A  L +E KS   + ++V+Y+  ID FGKVG++D A+    E+   GL+P+  T+ 
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696

Query: 99  SMIGVLCKAYRLDEAVNMFEHMEQNRKVP 13
           S++  L KA  ++EA+  F+ M++ +  P
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTP 725



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/87 (42%), Positives = 45/87 (51%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G  +    L   MK   C  D   YN+ ID F K GKV+ A++   EMKT G  P  VTY
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQNR 22
            S+I  L K  RLDEA  +FE  +  R
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSKR 652



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/84 (39%), Positives = 51/84 (60%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G+VD AL + +EMK ++   ++  YN+ ID   + GK+D A++    M+  GL P+  T 
Sbjct: 357 GKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415

Query: 102 TSMIGVLCKAYRLDEAVNMFEHME 31
             M+  LCK+ +LDEA  MFE M+
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMD 439



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/93 (33%), Positives = 49/93 (52%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G+V+ A  LL+EMK+   +  +V Y   ID   K+ ++D A+  F E K+  +  + V Y
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQNRKVPCAY 4
           +S+I    K  R+DEA  + E + Q    P  Y
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/85 (35%), Positives = 48/85 (56%)
 Frame = -2

Query: 282 GRVDAALSLLDEMKSNSCDADIVLYNVCIDSFGKVGKVDIAWKFFHEMKTHGLSPDDVTY 103
           G+ D A SLL+  ++      ++ YN  +    K+GKVD A K F EMK    +P+  TY
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTY 380

Query: 102 TSMIGVLCKAYRLDEAVNMFEHMEQ 28
             +I +LC+A +LD A  + + M++
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQK 405