BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026616
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial...   270   4e-70
emb|CBI15323.3| unnamed protein product [Vitis vinifera]              270   5e-70
ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-...   238   2e-60
ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|2...   237   5e-60
ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]...   231   4e-58

>ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial [Vitis vinifera]
          Length = 333

 Score =  270 bits (691), Expect = 4e-70
 Identities = 159/311 (51%), Positives = 198/311 (63%), Gaps = 24/311 (7%)
 Frame = -2

Query: 1186 MQRLLSVRLVTKKQASSNINYYISKTNPIHPQNAYGNL-----VSHYSTTSLIKPQNFN- 1025
            MQRL+S+++ +    S  +    S     HP   + +L       H  TTSLI P +F  
Sbjct: 1    MQRLISLKVAS--DISRRVFTKPSSLLHSHPNKTFFSLSQPSPTHHLHTTSLIPPPHFPW 58

Query: 1024 -----------GFLSKSVLVNKFL--SLFKAPSKGLVDSKGNYF-LQXXXXXXXXXXXXX 887
                       GF+S   L+ +FL  +L K  SK L  S+  +   Q             
Sbjct: 59   PSHHGLSRSVYGFISNPTLLKQFLPTALLKGSSKTLAASRVGFLRAQFPRRSFGFSPSFD 118

Query: 886  SQGRRW---IQGLDSDHVVLGLIVANVAVFLLWWSADYQFMVNNFMISLDNFKSGRVHTM 716
            S GRRW   + GL ++ VVLGLI+ANVAVF+LW  +D++FM+NNF ISLDNFKSGR+HT+
Sbjct: 119  SYGRRWRSWLSGLSTNDVVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTL 178

Query: 715  ITSAFSHIDAGHIISNMIGLYFFGNSIGSAFGPEXXXXXXXXXXXXGSVFYLVYHSFLIP 536
            ITSAFSHID GH+ISNMIGLYFFG +IG  FGPE            GSVFYLV+H+F+ P
Sbjct: 179  ITSAFSHIDIGHLISNMIGLYFFGMNIGRVFGPEFLLKLYLAGAVVGSVFYLVHHAFMAP 238

Query: 535  -SKSNQMWGRSPSSISGLGASGAVNAIMLLDIFLNPKKTIFFQMIIPVPAILVGIFLIGK 359
             SK  QMW  +PS+I GLGASGAVNAIMLLDIFL P+ T++ +  IPVPAIL+GIFLIGK
Sbjct: 239  SSKGQQMWSINPSAIPGLGASGAVNAIMLLDIFLFPRSTLYLEFFIPVPAILLGIFLIGK 298

Query: 358  DMLRILEGDTQ 326
            DMLRI+EGD Q
Sbjct: 299  DMLRIIEGDDQ 309


>emb|CBI15323.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  270 bits (690), Expect = 5e-70
 Identities = 158/307 (51%), Positives = 196/307 (63%), Gaps = 27/307 (8%)
 Frame = -2

Query: 1165 RLVTKKQASSNINYYISKTNPI---HPQNAYGNL-----VSHYSTTSLIKPQNFN----- 1025
            RL++ K AS       +K + +   HP   + +L       H  TTSLI P +F      
Sbjct: 32   RLISLKVASDISRRVFTKPSSLLHSHPNKTFFSLSQPSPTHHLHTTSLIPPPHFPWPSHH 91

Query: 1024 -------GFLSKSVLVNKFL--SLFKAPSKGLVDSKGNYF-LQXXXXXXXXXXXXXSQGR 875
                   GF+S   L+ +FL  +L K  SK L  S+  +   Q             S GR
Sbjct: 92   GLSRSVYGFISNPTLLKQFLPTALLKGSSKTLAASRVGFLRAQFPRRSFGFSPSFDSYGR 151

Query: 874  RW---IQGLDSDHVVLGLIVANVAVFLLWWSADYQFMVNNFMISLDNFKSGRVHTMITSA 704
            RW   + GL ++ VVLGLI+ANVAVF+LW  +D++FM+NNF ISLDNFKSGR+HT+ITSA
Sbjct: 152  RWRSWLSGLSTNDVVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTLITSA 211

Query: 703  FSHIDAGHIISNMIGLYFFGNSIGSAFGPEXXXXXXXXXXXXGSVFYLVYHSFLIP-SKS 527
            FSHID GH+ISNMIGLYFFG +IG  FGPE            GSVFYLV+H+F+ P SK 
Sbjct: 212  FSHIDIGHLISNMIGLYFFGMNIGRVFGPEFLLKLYLAGAVVGSVFYLVHHAFMAPSSKG 271

Query: 526  NQMWGRSPSSISGLGASGAVNAIMLLDIFLNPKKTIFFQMIIPVPAILVGIFLIGKDMLR 347
             QMW  +PS+I GLGASGAVNAIMLLDIFL P+ T++ +  IPVPAIL+GIFLIGKDMLR
Sbjct: 272  QQMWSINPSAIPGLGASGAVNAIMLLDIFLFPRSTLYLEFFIPVPAILLGIFLIGKDMLR 331

Query: 346  ILEGDTQ 326
            I+EGD Q
Sbjct: 332  IIEGDDQ 338


>ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-like [Cucumis sativus]
          Length = 336

 Score =  238 bits (608), Expect = 2e-60
 Identities = 137/272 (50%), Positives = 163/272 (59%), Gaps = 10/272 (3%)
 Frame = -2

Query: 1036 QNFNGFLSKSVLVNKFL-----SLFKAPSKGLVDSK----GNYFLQXXXXXXXXXXXXXS 884
            Q  +GF S  V+  +F+     + FK   K +V+S+    G  F +              
Sbjct: 65   QKIHGFFSVPVVGKRFIVNPSNTYFKGSMKSVVESRSLFTGTPFSKLKFQLKPGFVHQWG 124

Query: 883  QGRRWIQGLDSDHVVLGLIVANVAVFLLWWSADYQFMVNNFMISLDNFKSGRVHTMITSA 704
              R W Q L  + VVLGLI+ANVAVFLLW  AD  FM  NF ISL+N +SGR+HT+ITSA
Sbjct: 125  GRRSWFQRLTPNEVVLGLIIANVAVFLLWRIADPIFMSKNFTISLENVRSGRIHTLITSA 184

Query: 703  FSHIDAGHIISNMIGLYFFGNSIGSAFGPEXXXXXXXXXXXXGSVFYLVYHSF-LIPSKS 527
            FSHID GHI+SNM+GLYFFG +IG+ FG E            GS FYL +H F  + SKS
Sbjct: 185  FSHIDTGHIVSNMVGLYFFGMNIGNVFGSEFLLKLYLAGAIGGSAFYLAHHLFQALSSKS 244

Query: 526  NQMWGRSPSSISGLGASGAVNAIMLLDIFLNPKKTIFFQMIIPVPAILVGIFLIGKDMLR 347
               WG  P    GLGASGAVNAIMLLDIFL PK T++ Q  IPVPAIL+GIFLIGKDMLR
Sbjct: 245  RSFWGEDPVRAKGLGASGAVNAIMLLDIFLFPKATLYLQFFIPVPAILLGIFLIGKDMLR 304

Query: 346  ILEGDTQXXXXXXXXXXXXXXXXXARYRRGRF 251
            +LE D+Q                 AR RRGRF
Sbjct: 305  MLENDSQISGSAHLGGAAVAALAWARVRRGRF 336


>ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|222855471|gb|EEE93018.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  237 bits (604), Expect = 5e-60
 Identities = 120/210 (57%), Positives = 146/210 (69%), Gaps = 1/210 (0%)
 Frame = -2

Query: 877 RRWIQGLDSDHVVLGLIVANVAVFLLWWSADYQFMVNNFMISLDNFKSGRVHTMITSAFS 698
           R W   L +D+VVLGLI+AN AVF+LW   D +FM+ NFMISLDNF+SGR+HT++TSAFS
Sbjct: 33  RSWFNRLSADNVVLGLIIANAAVFMLWRIEDQKFMMENFMISLDNFRSGRIHTLVTSAFS 92

Query: 697 HIDAGHIISNMIGLYFFGNSIGSAFGPEXXXXXXXXXXXXGSVFYLVYHSFL-IPSKSNQ 521
           HID GHI  NMIGLYFFG +I   FGPE            GSVFYL++H ++ + SK   
Sbjct: 93  HIDIGHIAFNMIGLYFFGTNIARTFGPEFLLKLYLAGAIGGSVFYLLHHGYMDLSSKGQG 152

Query: 520 MWGRSPSSISGLGASGAVNAIMLLDIFLNPKKTIFFQMIIPVPAILVGIFLIGKDMLRIL 341
           MW R  S   GLGASGAVNAIMLLDIFLNP+ T++F  IIPVPAIL+GIFLIGKD+LR++
Sbjct: 153 MWARDSSRTPGLGASGAVNAIMLLDIFLNPRATLYFDFIIPVPAILLGIFLIGKDLLRVM 212

Query: 340 EGDTQXXXXXXXXXXXXXXXXXARYRRGRF 251
           EG++                  AR +RGRF
Sbjct: 213 EGNSNISGSAHLGGAAVAAIAWARIKRGRF 242


>ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]
            gi|9795596|gb|AAF98414.1|AC026238_6 Hypothetical protein
            [Arabidopsis thaliana]
            gi|13877607|gb|AAK43881.1|AF370504_1 Unknown protein
            [Arabidopsis thaliana] gi|20148713|gb|AAM10247.1| unknown
            protein [Arabidopsis thaliana] gi|21592397|gb|AAM64348.1|
            unknown [Arabidopsis thaliana]
            gi|332191612|gb|AEE29733.1| RHOMBOID-like protein 12
            [Arabidopsis thaliana]
          Length = 336

 Score =  231 bits (588), Expect = 4e-58
 Identities = 131/280 (46%), Positives = 171/280 (61%), Gaps = 6/280 (2%)
 Frame = -2

Query: 1072 VSHYSTTSLIKPQNFNGFLSKSVLVNKFLSLFKAPSKGLVDSK----GNYFLQXXXXXXX 905
            VS +  + L + +   GF + S L NK + L       LV+S+    G+ F +       
Sbjct: 61   VSRFDPSQLWRSEKIRGFFA-SALGNKAVKL-----GNLVESRVGFIGSQFPKKGFEFQR 114

Query: 904  XXXXXXSQGRRWIQGLDSDHVVLGLIVANVAVFLLWWSADYQFMVNNFMISLDNFKSGRV 725
                     + W+QGL    VVLGL++AN  VF++W   + QFM+NNFMISLDNFKSGR+
Sbjct: 115  FSGFQRRGWKHWLQGLSDRDVVLGLVIANAGVFVMWRVFNQQFMMNNFMISLDNFKSGRL 174

Query: 724  HTMITSAFSHIDAGHIISNMIGLYFFGNSIGSAFGPEXXXXXXXXXXXXGSVFYLVYHSF 545
            HT+ITSAFSHID GHI+SNMIGLYFFG SI   FGP+            GSVFYL++H++
Sbjct: 175  HTLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLYLAGALGGSVFYLIHHAY 234

Query: 544  LIPS--KSNQMWGRSPSSISGLGASGAVNAIMLLDIFLNPKKTIFFQMIIPVPAILVGIF 371
            +  +  K    + R PS   GLGASGAVNAIMLLDIFL+P+ T++ +  IPVPA+L+GIF
Sbjct: 235  MAATSPKGQGAFVRDPSRTPGLGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIF 294

Query: 370  LIGKDMLRILEGDTQXXXXXXXXXXXXXXXXXARYRRGRF 251
            LIGKD+LRI EG++                  AR R+GRF
Sbjct: 295  LIGKDILRITEGNSNISGSAHLGGAAVAAIAWARIRKGRF 334