BLASTX nr result

ID: Cnidium21_contig00026608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026608
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39588.3| unnamed protein product [Vitis vinifera]              357   3e-96
ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-li...   357   3e-96
emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]   357   3e-96
ref|XP_003553706.1| PREDICTED: peptide chain release factor 2-li...   355   7e-96
ref|XP_002512504.1| peptide chain release factor, putative [Rici...   353   5e-95

>emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  357 bits (916), Expect = 3e-96
 Identities = 179/203 (88%), Positives = 191/203 (94%)
 Frame = -3

Query: 1019 EMAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGAT 840
            E AGIKRATIKVDGEY+FGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGD A+
Sbjct: 268  ETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGD-AS 326

Query: 839  TRFQINESDLRVERMRAGGAGGQHVNTTESAVRITHIPTGISASCQNERSQHQNKASAMS 660
            +  QINESDLR+ER RAGGAGGQHVNTTESAVRI HIPTG++A+CQNERSQHQNKASAM+
Sbjct: 327  SHVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMA 386

Query: 659  VLQSRLDQLEIVRQAQANAQHTQSLNDISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSV 480
            VLQSRLDQLEI RQAQ NAQHTQSL DISWGNQIR+YVLHPYRMVKDLRTNYEVSDPDSV
Sbjct: 387  VLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSV 446

Query: 479  LEGDLDAFIFSFLSASMDKDEDD 411
            LEGDLD FI S+LSAS+DKDE +
Sbjct: 447  LEGDLDGFILSYLSASLDKDEGE 469


>ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 434

 Score =  357 bits (916), Expect = 3e-96
 Identities = 179/203 (88%), Positives = 191/203 (94%)
 Frame = -3

Query: 1019 EMAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGAT 840
            E AGIKRATIKVDGEY+FGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGD A+
Sbjct: 230  ETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGD-AS 288

Query: 839  TRFQINESDLRVERMRAGGAGGQHVNTTESAVRITHIPTGISASCQNERSQHQNKASAMS 660
            +  QINESDLR+ER RAGGAGGQHVNTTESAVRI HIPTG++A+CQNERSQHQNKASAM+
Sbjct: 289  SHVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMA 348

Query: 659  VLQSRLDQLEIVRQAQANAQHTQSLNDISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSV 480
            VLQSRLDQLEI RQAQ NAQHTQSL DISWGNQIR+YVLHPYRMVKDLRTNYEVSDPDSV
Sbjct: 349  VLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSV 408

Query: 479  LEGDLDAFIFSFLSASMDKDEDD 411
            LEGDLD FI S+LSAS+DKDE +
Sbjct: 409  LEGDLDGFILSYLSASLDKDEGE 431


>emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]
          Length = 426

 Score =  357 bits (916), Expect = 3e-96
 Identities = 179/203 (88%), Positives = 191/203 (94%)
 Frame = -3

Query: 1019 EMAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGAT 840
            E AGIKRATIKVDGEY+FGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGD A+
Sbjct: 222  ETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGD-AS 280

Query: 839  TRFQINESDLRVERMRAGGAGGQHVNTTESAVRITHIPTGISASCQNERSQHQNKASAMS 660
            +  QINESDLR+ER RAGGAGGQHVNTTESAVRI HIPTG++A+CQNERSQHQNKASAM+
Sbjct: 281  SHVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMA 340

Query: 659  VLQSRLDQLEIVRQAQANAQHTQSLNDISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSV 480
            VLQSRLDQLEI RQAQ NAQHTQSL DISWGNQIR+YVLHPYRMVKDLRTNYEVSDPDSV
Sbjct: 341  VLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSV 400

Query: 479  LEGDLDAFIFSFLSASMDKDEDD 411
            LEGDLD FI S+LSAS+DKDE +
Sbjct: 401  LEGDLDGFILSYLSASLDKDEGE 423


>ref|XP_003553706.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
          Length = 466

 Score =  355 bits (912), Expect = 7e-96
 Identities = 176/202 (87%), Positives = 192/202 (95%)
 Frame = -3

Query: 1019 EMAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGAT 840
            E+AGIKRATIKVDGE+AFGYAKAE+GVHRLVRISPFDS KRRHTSFAAVAVIPILGDG+T
Sbjct: 265  EIAGIKRATIKVDGEFAFGYAKAEIGVHRLVRISPFDSNKRRHTSFAAVAVIPILGDGST 324

Query: 839  TRFQINESDLRVERMRAGGAGGQHVNTTESAVRITHIPTGISASCQNERSQHQNKASAMS 660
               QINESDLR+ER RAGGAGGQHVNTTESAVRI HIPTG++A+CQNERSQHQNKASAM+
Sbjct: 325  -HVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMA 383

Query: 659  VLQSRLDQLEIVRQAQANAQHTQSLNDISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSV 480
            VLQSRLDQLE+ RQAQ NAQHTQSL DI+WG+QIRSYVLHPYRMVKDLRTNYEVSDPDSV
Sbjct: 384  VLQSRLDQLEMARQAQFNAQHTQSLTDITWGSQIRSYVLHPYRMVKDLRTNYEVSDPDSV 443

Query: 479  LEGDLDAFIFSFLSASMDKDED 414
            LEGDLD+FI S+LSAS+DKD+D
Sbjct: 444  LEGDLDSFILSYLSASLDKDDD 465


>ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis]
            gi|223548465|gb|EEF49956.1| peptide chain release factor,
            putative [Ricinus communis]
          Length = 550

 Score =  353 bits (905), Expect = 5e-95
 Identities = 175/204 (85%), Positives = 190/204 (93%)
 Frame = -3

Query: 1019 EMAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGAT 840
            E+AGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDG+T
Sbjct: 300  EIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGST 359

Query: 839  TRFQINESDLRVERMRAGGAGGQHVNTTESAVRITHIPTGISASCQNERSQHQNKASAMS 660
               QINESDLR+ER R+GG GGQH NTTESAVRI HIPTG++A+CQNERSQH NKASAM+
Sbjct: 360  -HVQINESDLRIERYRSGGPGGQHANTTESAVRIVHIPTGVTATCQNERSQHMNKASAMA 418

Query: 659  VLQSRLDQLEIVRQAQANAQHTQSLNDISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSV 480
            VLQSRLDQLE+ RQAQ NAQHTQSL +ISWGNQIR+YVLHPYRMVKDLRTNYEVSDPDSV
Sbjct: 419  VLQSRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSV 478

Query: 479  LEGDLDAFIFSFLSASMDKDEDDQ 408
            LEG++D FI S+LSAS+DKDED Q
Sbjct: 479  LEGEIDGFILSYLSASLDKDEDYQ 502


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