BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026597
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...   223   1e-56
emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]   223   1e-56
ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containi...   216   1e-54
ref|XP_002523294.1| pentatricopeptide repeat-containing protein,...   210   8e-53
ref|NP_197146.1| pentatricopeptide repeat-containing protein [Ar...   193   1e-47

>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
           gi|296089757|emb|CBI39576.3| unnamed protein product
           [Vitis vinifera]
          Length = 586

 Score =  223 bits (568), Expect = 1e-56
 Identities = 101/139 (72%), Positives = 122/139 (87%)
 Frame = -1

Query: 419 IVVIRNYGIASRPKLALQTFLRIKEFGVETSVRSFNTLLNALIQNKQFKLVHLLFKNCKK 240
           I VIRNYG A RPKLA++TFLRI  FG++ SVRSFNTLLN L+QNK+F LVHL+FKNC+K
Sbjct: 174 ITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRK 233

Query: 239 KFNVVPNVFTCNILLKGFCKSDDIEGALKVLDEMPEMGMVPNVVTYTTILGGFVSRGDMV 60
           KF +VPNVFTCNIL+K  CK +DI+ A++VL+EMP MG +PNVVTYTTILGG+VS+GDMV
Sbjct: 234 KFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMV 293

Query: 59  GAKKVFDEILDRGWIPDAT 3
           GA++VF EILDRGW+PD T
Sbjct: 294 GARRVFGEILDRGWVPDPT 312



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/93 (33%), Positives = 49/93 (52%)
 Frame = -1

Query: 347 EFGVETSVRSFNTLLNALIQNKQFKLVHLLFKNCKKKFNVVPNVFTCNILLKGFCKSDDI 168
           E G   S  ++N L+  + +  +      L+ N  +K   VPN FT N+L+KGFCK  + 
Sbjct: 443 EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEK-GCVPNAFTYNMLIKGFCKVGNA 501

Query: 167 EGALKVLDEMPEMGMVPNVVTYTTILGGFVSRG 69
              ++V++EM + G +PN  TY  +L G    G
Sbjct: 502 REGIRVMEEMLDNGCLPNKATYAILLEGLYELG 534



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/102 (30%), Positives = 53/102 (51%)
 Frame = -1

Query: 314 NTLLNALIQNKQFKLVHLLFKNCKKKFNVVPNVFTCNILLKGFCKSDDIEGALKVLDEMP 135
           +TL++ L +  +      LF   +K    +P+  T N L+ G C+  ++  A ++ D M 
Sbjct: 420 STLIHWLCKEGKVWEARKLFDEFEK--GSIPSTLTYNALIAGMCEGGELPEAARLWDNMV 477

Query: 134 EMGMVPNVVTYTTILGGFVSRGDMVGAKKVFDEILDRGWIPD 9
           E G VPN  TY  ++ GF   G+     +V +E+LD G +P+
Sbjct: 478 EKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519


>emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  223 bits (568), Expect = 1e-56
 Identities = 101/139 (72%), Positives = 122/139 (87%)
 Frame = -1

Query: 419 IVVIRNYGIASRPKLALQTFLRIKEFGVETSVRSFNTLLNALIQNKQFKLVHLLFKNCKK 240
           I VIRNYG A RPKLA++TFLRI  FG++ SVRSFNTLLN L+QNK+F LVHL+FKNC+K
Sbjct: 174 ITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRK 233

Query: 239 KFNVVPNVFTCNILLKGFCKSDDIEGALKVLDEMPEMGMVPNVVTYTTILGGFVSRGDMV 60
           KF +VPNVFTCNIL+K  CK +DI+ A++VL+EMP MG +PNVVTYTTILGG+VS+GDMV
Sbjct: 234 KFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMV 293

Query: 59  GAKKVFDEILDRGWIPDAT 3
           GA++VF EILDRGW+PD T
Sbjct: 294 GARRVFGEILDRGWVPDPT 312



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/93 (33%), Positives = 49/93 (52%)
 Frame = -1

Query: 347 EFGVETSVRSFNTLLNALIQNKQFKLVHLLFKNCKKKFNVVPNVFTCNILLKGFCKSDDI 168
           E G   S  ++N L+  + +  +      L+ N  +K   VPN FT N+L+KGFCK  + 
Sbjct: 443 EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEK-GCVPNAFTYNMLIKGFCKVGNA 501

Query: 167 EGALKVLDEMPEMGMVPNVVTYTTILGGFVSRG 69
              ++V++EM + G +PN  TY  +L G    G
Sbjct: 502 REGIRVMEEMLDNGCLPNKATYAILLEGLYELG 534



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/102 (30%), Positives = 53/102 (51%)
 Frame = -1

Query: 314 NTLLNALIQNKQFKLVHLLFKNCKKKFNVVPNVFTCNILLKGFCKSDDIEGALKVLDEMP 135
           +TL++ L +  +      LF   +K    +P+  T N L+ G C+  ++  A ++ D M 
Sbjct: 420 STLIHWLCKEGKVWEARKLFDEFEK--GSIPSTLTYNALIAGMCEGGELPEAARLWDNMV 477

Query: 134 EMGMVPNVVTYTTILGGFVSRGDMVGAKKVFDEILDRGWIPD 9
           E G VPN  TY  ++ GF   G+     +V +E+LD G +P+
Sbjct: 478 EKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519


>ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
           gi|449492939|ref|XP_004159147.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  216 bits (551), Expect = 1e-54
 Identities = 102/139 (73%), Positives = 118/139 (84%)
 Frame = -1

Query: 419 IVVIRNYGIASRPKLALQTFLRIKEFGVETSVRSFNTLLNALIQNKQFKLVHLLFKNCKK 240
           I VIR+YG+ASRPK+AL+TFLRI+ FGV  SVRS NTLLNAL+QN +F  VHLLFK  K 
Sbjct: 125 ITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKS 184

Query: 239 KFNVVPNVFTCNILLKGFCKSDDIEGALKVLDEMPEMGMVPNVVTYTTILGGFVSRGDMV 60
           KF VVPNVFTCNIL+K  CK +D+EGA KV DEMP MG+VPNVVTYTTILGG+VSRGDM+
Sbjct: 185 KFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMI 244

Query: 59  GAKKVFDEILDRGWIPDAT 3
           GAK+VF E+ D GW+PDAT
Sbjct: 245 GAKRVFGELFDHGWLPDAT 263


>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 544

 Score =  210 bits (535), Expect = 8e-53
 Identities = 95/139 (68%), Positives = 117/139 (84%)
 Frame = -1

Query: 419 IVVIRNYGIASRPKLALQTFLRIKEFGVETSVRSFNTLLNALIQNKQFKLVHLLFKNCKK 240
           I VIRNYG+A +P  AL+TF+RI++F V+ SVRS NTLLNA +QNK++ LVH +FKNC+ 
Sbjct: 134 INVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRS 193

Query: 239 KFNVVPNVFTCNILLKGFCKSDDIEGALKVLDEMPEMGMVPNVVTYTTILGGFVSRGDMV 60
           K+ V+PNVFTCNIL+K  CK +D+E A+KVLDEMP MGM+PNVVTYTTILGG+ SRGDMV
Sbjct: 194 KYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMV 253

Query: 59  GAKKVFDEILDRGWIPDAT 3
            A KVF E+ DRGW+PDAT
Sbjct: 254 NANKVFGELFDRGWLPDAT 272


>ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
           gi|9759124|dbj|BAB09609.1| salt-inducible protein-like
           [Arabidopsis thaliana] gi|332004907|gb|AED92290.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 535

 Score =  193 bits (490), Expect = 1e-47
 Identities = 88/139 (63%), Positives = 114/139 (82%)
 Frame = -1

Query: 419 IVVIRNYGIASRPKLALQTFLRIKEFGVETSVRSFNTLLNALIQNKQFKLVHLLFKNCKK 240
           I ++RNYG+A R + +++ FLRI +FGV+ SVRS NTLLN LIQN++F LVH +FKN K+
Sbjct: 124 IDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKE 183

Query: 239 KFNVVPNVFTCNILLKGFCKSDDIEGALKVLDEMPEMGMVPNVVTYTTILGGFVSRGDMV 60
            F + PN+FTCN+L+K  CK +DIE A KVLDE+P MG+VPN+VTYTTILGG+V+RGDM 
Sbjct: 184 SFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDME 243

Query: 59  GAKKVFDEILDRGWIPDAT 3
            AK+V +E+LDRGW PDAT
Sbjct: 244 SAKRVLEEMLDRGWYPDAT 262