BLASTX nr result

ID: Cnidium21_contig00026569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026569
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301476.1| multidrug resistance protein ABC transporter...   110   1e-42
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   110   4e-42
dbj|BAE98764.1| MRP-like ABC transporter [Arabidopsis thaliana]       100   8e-42
ref|NP_182301.1| ABC transporter C family member 4 [Arabidopsis ...   100   8e-42
ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi...    97   4e-41

>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1508

 Score =  110 bits (274), Expect(2) = 1e-42
 Identities = 56/89 (62%), Positives = 69/89 (77%)
 Frame = -1

Query: 603  VLLVTHQVDFLHNADLILVMRDGKIVESGRYEPLLKAGLDFGALVAAHETSMELVETSTT 424
            +LLVTHQVDFLHN DLI VMRDG+IV+SG+Y  LL +GLDFGALVAAH+TSMELVE S+ 
Sbjct: 820  ILLVTHQVDFLHNVDLISVMRDGQIVQSGKYNDLLVSGLDFGALVAAHDTSMELVEASSE 879

Query: 423  VASDKSVQRPKSHLASSGPKKPTGENGVL 337
            ++S+ S + PKS    S   +  GEN +L
Sbjct: 880  ISSENSPRPPKSPRGPSKLGEANGENKLL 908



 Score = 89.0 bits (219), Expect(2) = 1e-42
 Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 7/108 (6%)
 Frame = -3

Query: 304  LIEEEERESGHVSFGVYKQYFTEAFGWWRVAGVLLIPLLWQGSTMGSDYWAIG*HTRLQH 125
            LIEEEER +G++   VYKQY TEAFGWW +   +L+ L+WQ S M  DYW +   T  + 
Sbjct: 920  LIEEEERATGNIGLHVYKQYCTEAFGWWGIVVAMLLSLVWQASQMAGDYW-LAYETAEER 978

Query: 124  IEI----SFLLCFGV---VSCVFVLGGAFFVTYLGLKTTQSFFHRILH 2
              +     F+  +G+   VS VF+   + FVT +GLKT Q  F  ILH
Sbjct: 979  AAMFKPSLFISVYGIIAAVSVVFLAMRSLFVTLMGLKTAQKLFGGILH 1026


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223537625|gb|EEF39248.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  110 bits (276), Expect(2) = 4e-42
 Identities = 54/86 (62%), Positives = 67/86 (77%)
 Frame = -1

Query: 603  VLLVTHQVDFLHNADLILVMRDGKIVESGRYEPLLKAGLDFGALVAAHETSMELVETSTT 424
            +LLVTHQVDFLHN DLI+VMRDG IV+SG+Y  L+K+G+DFGALVAAH+T+MELVE  T 
Sbjct: 818  ILLVTHQVDFLHNIDLIMVMRDGMIVQSGKYNNLVKSGMDFGALVAAHDTAMELVEAGTA 877

Query: 423  VASDKSVQRPKSHLASSGPKKPTGEN 346
            V  + S + PKS  +SS   +  GEN
Sbjct: 878  VPGENSPRPPKSPQSSSNALEANGEN 903



 Score = 86.7 bits (213), Expect(2) = 4e-42
 Identities = 49/108 (45%), Positives = 62/108 (57%), Gaps = 7/108 (6%)
 Frame = -3

Query: 304  LIEEEERESGHVSFGVYKQYFTEAFGWWRVAGVLLIPLLWQGSTMGSDYWAIG*HTRLQH 125
            L+EEEERE+G V   VYKQY T AFGWW V   LL+ ++WQ S M +DYW +   T  + 
Sbjct: 918  LVEEEERETGKVGLHVYKQYCTAAFGWWGVTVALLLSIVWQASLMAADYW-LAYETSEER 976

Query: 124  IEI----SFLLCFGVV---SCVFVLGGAFFVTYLGLKTTQSFFHRILH 2
              I     F+  + V+   S V +   A FV  +GLKT Q FF  ILH
Sbjct: 977  ASIFDPSLFISVYAVITAASLVLLTMRALFVNLMGLKTAQIFFMGILH 1024


>dbj|BAE98764.1| MRP-like ABC transporter [Arabidopsis thaliana]
          Length = 1516

 Score = 99.8 bits (247), Expect(2) = 8e-42
 Identities = 51/80 (63%), Positives = 60/80 (75%)
 Frame = -1

Query: 603  VLLVTHQVDFLHNADLILVMRDGKIVESGRYEPLLKAGLDFGALVAAHETSMELVETSTT 424
            VLLVTHQVDFLHN D ILVMRDGKIVESG+Y+ L+ +GLDFG LVAAHETSMELVE    
Sbjct: 818  VLLVTHQVDFLHNVDCILVMRDGKIVESGKYDELVSSGLDFGELVAAHETSMELVEAGAD 877

Query: 423  VASDKSVQRPKSHLASSGPK 364
             A+  +  R  +   +S P+
Sbjct: 878  SAAVATSPRTPTSPHASSPR 897



 Score = 96.7 bits (239), Expect(2) = 8e-42
 Identities = 53/107 (49%), Positives = 67/107 (62%), Gaps = 6/107 (5%)
 Frame = -3

Query: 304  LIEEEERESGHVSFGVYKQYFTEAFGWWRVAGVLLIPLLWQGSTMGSDYWAIG*HTRLQH 125
            LI+EEERE+G VS GVYKQY TEA+GWW +  VL   L WQGS M SDYW     +    
Sbjct: 928  LIKEEERETGQVSLGVYKQYCTEAYGWWGIVLVLFFSLTWQGSLMASDYWLAYETSAKNA 987

Query: 124  IEIS---FLLCF---GVVSCVFVLGGAFFVTYLGLKTTQSFFHRILH 2
            I      F+L +    +VS V V   +++VT+LGLKT Q FF +IL+
Sbjct: 988  ISFDASVFILGYVIIALVSIVLVSIRSYYVTHLGLKTAQIFFRQILN 1034


>ref|NP_182301.1| ABC transporter C family member 4 [Arabidopsis thaliana]
            gi|90103510|sp|Q7DM58.2|AB4C_ARATH RecName: Full=ABC
            transporter C family member 4; Short=ABC transporter
            ABCC.4; Short=AtABCC4; AltName: Full=ATP-energized
            glutathione S-conjugate pump 4; AltName: Full=Glutathione
            S-conjugate-transporting ATPase 4; AltName:
            Full=Multidrug resistance-associated protein 4
            gi|7716583|gb|AAF68441.1|AF243509_1 MRP4 [Arabidopsis
            thaliana] gi|2959767|emb|CAA05625.1| AtMRP4 [Arabidopsis
            thaliana] gi|3738292|gb|AAC63634.1| glutathione-conjugate
            transporter AtMRP4 [Arabidopsis thaliana]
            gi|330255795|gb|AEC10889.1| ABC transporter C family
            member 4 [Arabidopsis thaliana]
          Length = 1516

 Score = 99.8 bits (247), Expect(2) = 8e-42
 Identities = 51/80 (63%), Positives = 60/80 (75%)
 Frame = -1

Query: 603  VLLVTHQVDFLHNADLILVMRDGKIVESGRYEPLLKAGLDFGALVAAHETSMELVETSTT 424
            VLLVTHQVDFLHN D ILVMRDGKIVESG+Y+ L+ +GLDFG LVAAHETSMELVE    
Sbjct: 818  VLLVTHQVDFLHNVDCILVMRDGKIVESGKYDELVSSGLDFGELVAAHETSMELVEAGAD 877

Query: 423  VASDKSVQRPKSHLASSGPK 364
             A+  +  R  +   +S P+
Sbjct: 878  SAAVATSPRTPTSPHASSPR 897



 Score = 96.7 bits (239), Expect(2) = 8e-42
 Identities = 53/107 (49%), Positives = 67/107 (62%), Gaps = 6/107 (5%)
 Frame = -3

Query: 304  LIEEEERESGHVSFGVYKQYFTEAFGWWRVAGVLLIPLLWQGSTMGSDYWAIG*HTRLQH 125
            LI+EEERE+G VS GVYKQY TEA+GWW +  VL   L WQGS M SDYW     +    
Sbjct: 928  LIKEEERETGQVSLGVYKQYCTEAYGWWGIVLVLFFSLTWQGSLMASDYWLAYETSAKNA 987

Query: 124  IEIS---FLLCF---GVVSCVFVLGGAFFVTYLGLKTTQSFFHRILH 2
            I      F+L +    +VS V V   +++VT+LGLKT Q FF +IL+
Sbjct: 988  ISFDASVFILGYVIIALVSIVLVSIRSYYVTHLGLKTAQIFFRQILN 1034


>ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi|297326163|gb|EFH56583.1|
            ATMRP4 [Arabidopsis lyrata subsp. lyrata]
          Length = 1525

 Score = 97.1 bits (240), Expect(2) = 4e-41
 Identities = 51/81 (62%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
 Frame = -1

Query: 603  VLLVTHQVDFLHNADLILVMRDGKIVESGRYEPLLKAGLDFGALVAAHETSMELVETSTT 424
            +LLVTHQVDFLHN D ILVMRDG+IVESG+Y+ L+ +GLDFG LVAAHETSMELVE    
Sbjct: 824  ILLVTHQVDFLHNVDCILVMRDGRIVESGKYDELVSSGLDFGELVAAHETSMELVEAGAD 883

Query: 423  VASDKSV----QRPKSHLASS 373
             A+  ++    + P S  ASS
Sbjct: 884  SAAAATIATSPRTPMSPHASS 904



 Score = 97.1 bits (240), Expect(2) = 4e-41
 Identities = 52/107 (48%), Positives = 67/107 (62%), Gaps = 6/107 (5%)
 Frame = -3

Query: 304  LIEEEERESGHVSFGVYKQYFTEAFGWWRVAGVLLIPLLWQGSTMGSDYWAIG*HTRLQH 125
            LI+EEERE+G VS GVYKQY TEA+GWW +  VL   L WQGS M SDYW     +    
Sbjct: 937  LIKEEERETGQVSLGVYKQYCTEAYGWWGIVLVLFFSLTWQGSLMASDYWLAYETSAKNA 996

Query: 124  IEIS---FLLCF---GVVSCVFVLGGAFFVTYLGLKTTQSFFHRILH 2
            I      F+L +    +VS + V   +++VT+LGLKT Q FF +IL+
Sbjct: 997  ISFDASVFILVYVIIALVSIILVSLRSYYVTHLGLKTAQIFFRQILN 1043


Top