BLASTX nr result

ID: Cnidium21_contig00026548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026548
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534949.1| conserved hypothetical protein [Ricinus comm...    82   5e-14
ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [...    63   2e-08

>ref|XP_002534949.1| conserved hypothetical protein [Ricinus communis]
           gi|223524315|gb|EEF27434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/60 (70%), Positives = 44/60 (73%)
 Frame = +3

Query: 99  MPSTRALLATNHSLAGRSGSAFQVRYPNRILCSTGSLAPXXXXXXXXXXXXXXXQPLAVI 278
           MPSTRALLATNHSLAGR GSAFQVRYPNR+LCSTGSLAP               QPLAV+
Sbjct: 1   MPSTRALLATNHSLAGRLGSAFQVRYPNRLLCSTGSLAPSSILSTALLLGSLQLQPLAVL 60


>ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [Ricinus communis]
           gi|223533482|gb|EEF35227.1| cytochrome C oxidase,
           subunit II, putative [Ricinus communis]
          Length = 139

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = -3

Query: 298 EPPEKQAITASGWSSMEPRSKAVDKIEEGARLPVEQRIRLG 176
           +PP+KQ ITAS WS  EPRSKAVDKI+EGARL VEQR +LG
Sbjct: 99  DPPKKQDITASDWSCREPRSKAVDKIKEGARLLVEQRRQLG 139


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