BLASTX nr result

ID: Cnidium21_contig00026546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026546
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...    99   3e-19
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...    99   3e-19
ref|NP_001154500.1| TTF-type zinc finger protein with HAT dimeri...    99   4e-19
ref|NP_001154499.1| TTF-type zinc finger protein with HAT dimeri...    99   4e-19
ref|NP_192704.1| uncharacterized protein [Arabidopsis thaliana] ...    97   1e-18

>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/93 (53%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
 Frame = +1

Query: 7   IGQKPRRFNPKWFESY-DWLEYSVKVDRVFCLPCYLFNDHVRTQVGGDAFILEGFGAWTK 183
           IG+  RRFNPKWF+ Y DWLEYSV+ ++ FCL CYLF D    Q G D+F+  GF +W K
Sbjct: 105 IGKVLRRFNPKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQTGNQGGSDSFLSTGFCSWNK 164

Query: 184 MQERLRAHIG-EVGSVHNKAIKNFDDLMRQHQS 279
             +RL  H+G +V S HN A +  +DLMRQ QS
Sbjct: 165 -ADRLDQHVGLDVNSFHNNAKRKCEDLMRQGQS 196


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/93 (53%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
 Frame = +1

Query: 7   IGQKPRRFNPKWFESY-DWLEYSVKVDRVFCLPCYLFNDHVRTQVGGDAFILEGFGAWTK 183
           IG+  RRFNPKWF+ Y DWLEYSV+ ++ FCL CYLF D    Q G D+F+  GF +W K
Sbjct: 63  IGKVLRRFNPKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQTGNQGGSDSFLSTGFCSWNK 122

Query: 184 MQERLRAHIG-EVGSVHNKAIKNFDDLMRQHQS 279
             +RL  H+G +V S HN A +  +DLMRQ QS
Sbjct: 123 -ADRLDQHVGLDVNSFHNNAKRKCEDLMRQGQS 154


>ref|NP_001154500.1| TTF-type zinc finger protein with HAT dimerisation domain
           [Arabidopsis thaliana] gi|330250920|gb|AEC06014.1|
           TTF-type zinc finger protein with HAT dimerisation
           domain [Arabidopsis thaliana]
          Length = 564

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +1

Query: 22  RRFNPKWFESYD-WLEYSVKVDRVFCLPCYLFNDHVRTQVGGDAFILEGFGAWTKMQERL 198
           RRFNP WF+ Y  WLEYSVK D+ +CL CYLF D++  + G D F  +GF  W K  + L
Sbjct: 2   RRFNPDWFDLYSGWLEYSVKKDKAYCLGCYLFRDYLENKSGSDTFATKGFDTW-KNPQSL 60

Query: 199 RAHIGEVGSVHNKAIKNFDDLMRQHQS 279
           R H+G V S HN A+K  D LMRQ QS
Sbjct: 61  REHVGLVNSFHNNALKRADCLMRQGQS 87


>ref|NP_001154499.1| TTF-type zinc finger protein with HAT dimerisation domain
           [Arabidopsis thaliana] gi|330250919|gb|AEC06013.1|
           TTF-type zinc finger protein with HAT dimerisation
           domain [Arabidopsis thaliana]
          Length = 592

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +1

Query: 22  RRFNPKWFESYD-WLEYSVKVDRVFCLPCYLFNDHVRTQVGGDAFILEGFGAWTKMQERL 198
           RRFNP WF+ Y  WLEYSVK D+ +CL CYLF D++  + G D F  +GF  W K  + L
Sbjct: 2   RRFNPDWFDLYSGWLEYSVKKDKAYCLGCYLFRDYLENKSGSDTFATKGFDTW-KNPQSL 60

Query: 199 RAHIGEVGSVHNKAIKNFDDLMRQHQS 279
           R H+G V S HN A+K  D LMRQ QS
Sbjct: 61  REHVGLVNSFHNNALKRADCLMRQGQS 87


>ref|NP_192704.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4538896|emb|CAB39633.1| putative protein [Arabidopsis
           thaliana] gi|7267661|emb|CAB78089.1| putative protein
           [Arabidopsis thaliana] gi|332657378|gb|AEE82778.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 664

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
 Frame = +1

Query: 4   MIGQKPRRFNPKWFESY-DWLEYSVKVDRVFCLPCYLFNDHVRTQVGGDAFILEGFGAWT 180
           +IG+  RRFNPKWF+ Y DWLEYSV+ ++ FCL CYLF D    Q G D+F+  GF +W 
Sbjct: 62  VIGKVLRRFNPKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQAGNQGGSDSFLSTGFCSWN 121

Query: 181 KMQERLRAHIG-EVGSVHNKAIKNFDDLMRQ 270
           K  +RL  H+G +V S HN A +  +DLMRQ
Sbjct: 122 K-ADRLDQHVGLDVNSFHNNAKRKCEDLMRQ 151


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