BLASTX nr result

ID: Cnidium21_contig00026513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026513
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316547.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
ref|XP_002331514.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
ref|XP_002269336.1| PREDICTED: peroxisomal membrane protein PMP2...   182   2e-44
emb|CBI23218.3| unnamed protein product [Vitis vinifera]              181   4e-44
ref|XP_002518452.1| peroxisomal membrane protein 2, pxmp2, putat...   181   5e-44

>ref|XP_002316547.1| predicted protein [Populus trichocarpa] gi|222859612|gb|EEE97159.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  185 bits (469), Expect = 4e-45
 Identities = 78/107 (72%), Positives = 93/107 (86%)
 Frame = +3

Query: 42  VLFGVVYLGPFGHYFHILLDKFFKGKKDPSTVGKKVLVEQLTSSPWNNMLFMIYYGSIIE 221
           VLFG  YLGPFGHY HILLDK FKGKKD +TV KKV VEQLT+SPWNN++FM+YYG +I+
Sbjct: 57  VLFGFGYLGPFGHYLHILLDKLFKGKKDTTTVAKKVAVEQLTASPWNNLVFMVYYGMVID 116

Query: 222 GRPWNQVKSKIKKEYPTVQYAAWTFWPVIGWINHQHVPLQFRVIVQS 362
           GRPW QVK+K+KKEYP VQ+ +WTFWPV+GW+NHQ++P QFRVI  S
Sbjct: 117 GRPWLQVKTKLKKEYPAVQFTSWTFWPVVGWVNHQYIPQQFRVIFHS 163


>ref|XP_002331514.1| predicted protein [Populus trichocarpa] gi|222873738|gb|EEF10869.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  184 bits (466), Expect = 8e-45
 Identities = 77/107 (71%), Positives = 94/107 (87%)
 Frame = +3

Query: 42  VLFGVVYLGPFGHYFHILLDKFFKGKKDPSTVGKKVLVEQLTSSPWNNMLFMIYYGSIIE 221
           VLFG  YLGPFGH+ H++L+K FKGKKD +TV KKV VEQLT+SPWNN++FMIYYG +I+
Sbjct: 35  VLFGFGYLGPFGHFLHLMLEKMFKGKKDTATVAKKVAVEQLTASPWNNLVFMIYYGMVID 94

Query: 222 GRPWNQVKSKIKKEYPTVQYAAWTFWPVIGWINHQHVPLQFRVIVQS 362
           GRPW QVK+K+KKEYP VQ+ +WTFWPV+GW+NHQ+VPLQFRVI  S
Sbjct: 95  GRPWMQVKTKLKKEYPAVQFTSWTFWPVVGWVNHQYVPLQFRVIFHS 141


>ref|XP_002269336.1| PREDICTED: peroxisomal membrane protein PMP22 [Vitis vinifera]
           gi|147836521|emb|CAN70890.1| hypothetical protein
           VITISV_000480 [Vitis vinifera]
          Length = 185

 Score =  182 bits (463), Expect = 2e-44
 Identities = 78/107 (72%), Positives = 92/107 (85%)
 Frame = +3

Query: 42  VLFGVVYLGPFGHYFHILLDKFFKGKKDPSTVGKKVLVEQLTSSPWNNMLFMIYYGSIIE 221
           VL G VYLGPFGH+ HILLDK FKGKKD  TV KKV++EQLT+SPWNN +FM+YYG +IE
Sbjct: 57  VLLGFVYLGPFGHFLHILLDKLFKGKKDSKTVAKKVVLEQLTASPWNNFVFMVYYGLVIE 116

Query: 222 GRPWNQVKSKIKKEYPTVQYAAWTFWPVIGWINHQHVPLQFRVIVQS 362
           GR W+QVK+KIKK+YP VQY +WTFWPV+GW+NHQ+VPLQ RVI  S
Sbjct: 117 GRNWSQVKTKIKKDYPAVQYTSWTFWPVVGWVNHQYVPLQLRVIFHS 163


>emb|CBI23218.3| unnamed protein product [Vitis vinifera]
          Length = 231

 Score =  181 bits (460), Expect = 4e-44
 Identities = 77/104 (74%), Positives = 91/104 (87%)
 Frame = +3

Query: 42  VLFGVVYLGPFGHYFHILLDKFFKGKKDPSTVGKKVLVEQLTSSPWNNMLFMIYYGSIIE 221
           VL G VYLGPFGH+ HILLDK FKGKKD  TV KKV++EQLT+SPWNN +FM+YYG +IE
Sbjct: 57  VLLGFVYLGPFGHFLHILLDKLFKGKKDSKTVAKKVVLEQLTASPWNNFVFMVYYGLVIE 116

Query: 222 GRPWNQVKSKIKKEYPTVQYAAWTFWPVIGWINHQHVPLQFRVI 353
           GR W+QVK+KIKK+YP VQY +WTFWPV+GW+NHQ+VPLQ RVI
Sbjct: 117 GRNWSQVKTKIKKDYPAVQYTSWTFWPVVGWVNHQYVPLQLRVI 160


>ref|XP_002518452.1| peroxisomal membrane protein 2, pxmp2, putative [Ricinus communis]
           gi|223542297|gb|EEF43839.1| peroxisomal membrane protein
           2, pxmp2, putative [Ricinus communis]
          Length = 185

 Score =  181 bits (459), Expect = 5e-44
 Identities = 80/104 (76%), Positives = 89/104 (85%)
 Frame = +3

Query: 42  VLFGVVYLGPFGHYFHILLDKFFKGKKDPSTVGKKVLVEQLTSSPWNNMLFMIYYGSIIE 221
           VLFG  YLGPFGH+ HI+LDK FKGKKD  TV KKV+VEQLTSSPWNNMLFMIYYG I+E
Sbjct: 57  VLFGSAYLGPFGHFLHIILDKIFKGKKDTKTVAKKVVVEQLTSSPWNNMLFMIYYGVIVE 116

Query: 222 GRPWNQVKSKIKKEYPTVQYAAWTFWPVIGWINHQHVPLQFRVI 353
            RPW  VK++IKKEYP VQ  +WTFWPV+GWINHQ+VPLQ RVI
Sbjct: 117 RRPWMHVKARIKKEYPKVQLTSWTFWPVVGWINHQYVPLQLRVI 160


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