BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026492
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]   114   6e-24
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   114   6e-24
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   114   8e-24
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]   114   8e-24
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   114   8e-24

>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/108 (52%), Positives = 74/108 (68%)
 Frame = -2

Query: 326  ENWHAIQMDVTNAFLHGELHEVVYMKMPPGYNYWGCRIDESSVKYSHSTTELVCRLKKSL 147
            + WH  Q+DV NAFLHG+L+E VYMK+PPGYN  G  +  ++V          C L KSL
Sbjct: 850  KGWHLSQLDVNNAFLHGDLNEEVYMKLPPGYNRKGESLPSNAV----------CLLHKSL 899

Query: 146  YGLKQAPRLWFSKLSSKLLQMGYYQSKSDYSLFVTHNDSLIIAILVYV 3
            YGLKQA R WFSK S+ ++ +G+ QS SD+SLF+ + D L IA+LVYV
Sbjct: 900  YGLKQASRQWFSKFSTAIMGLGFSQSPSDHSLFIKNVDGLFIALLVYV 947


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/107 (57%), Positives = 72/107 (67%)
 Frame = -2

Query: 323  NWHAIQMDVTNAFLHGELHEVVYMKMPPGYNYWGCRIDESSVKYSHSTTELVCRLKKSLY 144
            +WH  QMDV NAFLHG+L E VYMK+P G+     + D+ S          VCRL KSLY
Sbjct: 1060 DWHVHQMDVHNAFLHGDLKEEVYMKLPQGF-----QCDDPSK---------VCRLHKSLY 1105

Query: 143  GLKQAPRLWFSKLSSKLLQMGYYQSKSDYSLFVTHNDSLIIAILVYV 3
            GLKQAPR WFSKLSS L Q G+ QS SDYSLF  +ND + + +LVYV
Sbjct: 1106 GLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGIFVHVLVYV 1152


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/107 (57%), Positives = 72/107 (67%)
 Frame = -2

Query: 323 NWHAIQMDVTNAFLHGELHEVVYMKMPPGYNYWGCRIDESSVKYSHSTTELVCRLKKSLY 144
           +WH  QMDV NAFLHG+L E VYMK+P G+     + D+ S          VCRL KSLY
Sbjct: 701 DWHVHQMDVHNAFLHGDLKEEVYMKLPQGF-----QCDDPSK---------VCRLHKSLY 746

Query: 143 GLKQAPRLWFSKLSSKLLQMGYYQSKSDYSLFVTHNDSLIIAILVYV 3
           GLKQAPR WFSKLSS L Q G+ QS SDYSLF  +ND + + +LVYV
Sbjct: 747 GLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYV 793


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/108 (52%), Positives = 73/108 (67%)
 Frame = -2

Query: 326  ENWHAIQMDVTNAFLHGELHEVVYMKMPPGYNYWGCRIDESSVKYSHSTTELVCRLKKSL 147
            + WH  Q+DV NAFLHG+L+E VYMK+PPGYN  G  +  + V          C L KSL
Sbjct: 896  KGWHLSQLDVNNAFLHGDLNEEVYMKLPPGYNRKGESLPSNXV----------CLLHKSL 945

Query: 146  YGLKQAPRLWFSKLSSKLLQMGYYQSKSDYSLFVTHNDSLIIAILVYV 3
            YGLKQA R WFSK S+ ++ +G+ QS SD+SLF+ + D L IA+LVYV
Sbjct: 946  YGLKQASRQWFSKFSTAIMGLGFSQSPSDHSLFIKNVDGLFIAJLVYV 993


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/107 (57%), Positives = 72/107 (67%)
 Frame = -2

Query: 323 NWHAIQMDVTNAFLHGELHEVVYMKMPPGYNYWGCRIDESSVKYSHSTTELVCRLKKSLY 144
           +WH  QMDV NAFLHG+L E VYMK+P G+     + D+ S          VCRL KSLY
Sbjct: 701 DWHVHQMDVHNAFLHGDLKEEVYMKLPQGF-----QCDDPSK---------VCRLHKSLY 746

Query: 143 GLKQAPRLWFSKLSSKLLQMGYYQSKSDYSLFVTHNDSLIIAILVYV 3
           GLKQAPR WFSKLSS L Q G+ QS SDYSLF  +ND + + +LVYV
Sbjct: 747 GLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYV 793