BLASTX nr result
ID: Cnidium21_contig00026474
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00026474
(950 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm... 100 3e-22
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 84 2e-20
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 93 2e-18
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355... 84 5e-14
ref|XP_003593860.1| hypothetical protein MTR_2g018620 [Medicago ... 79 2e-12
>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
gi|223541858|gb|EEF43404.1| conserved hypothetical
protein [Ricinus communis]
Length = 668
Score = 100 bits (248), Expect(2) = 3e-22
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Frame = +3
Query: 30 CRRVLPTADALGKKFVNISPTCSWCQLNVEDDMHILFGCCFAKEAWLRFGLADVVQASPN 209
C + TA L ++V++ P C WC E H+LFGC A+E W G
Sbjct: 448 CSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGCSMARECWDLLGFR--FSFPTE 505
Query: 210 DNVMTLLK*VFQSGSREQNGRVGLVCWNLWHRRNN*VWNRINT*SFGIQSRSISMLAEWN 389
+ + ++ F + ++ LVC +LW++RN+ VWN+ + ++G+ S + +L +
Sbjct: 506 SPICSWIQNFFIDNHEDTCAKMALVCGSLWNQRNHWVWNKQSNTTYGVISPANQLLEQRT 565
Query: 390 RAR---E*IVKQSKQQHVSSRMWCKPPDGWVKINIDAACQPITGQMGVSCVIRD 542
RA+ E I +R W KP GW+KIN D A G++G+ CV+RD
Sbjct: 566 RAQSADEEIAPPLGHNTDVTRKWTKPELGWLKINTDTALFLKQGRIGLGCVVRD 619
Score = 32.0 bits (71), Expect(2) = 3e-22
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 583 GRV*HREVEAIGLQGALSWTKEWRRNKCKFE 675
GR RE EA+ ++ ALS+ K+++ +KC FE
Sbjct: 634 GRFTAREAEALSMKEALSYMKDYQMDKCFFE 664
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 84.0 bits (206), Expect(3) = 2e-20
Identities = 61/180 (33%), Positives = 83/180 (46%)
Frame = +3
Query: 9 LRFQQRSCRRVLPTADALGKKFVNISPTCSWCQLNVEDDMHILFGCCFAKEAWLRFGLAD 188
L F R+ R LPT AL + V+ C C+ +E +H L C A++ W GLA
Sbjct: 521 LNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAARDVWDESGLA- 579
Query: 189 VVQASPNDNVMTLLK*VFQSGSREQNGRVGLVCWNLWHRRNN*VWNRINT*SFGIQSRSI 368
++Q + V L +F + VCW LW RRN+ VWN S + +
Sbjct: 580 MLQGNFGSFVDWLAT-MFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGCF 638
Query: 369 SMLAEWNRARE*IVKQSKQQHVSSRMWCKPPDGWVKINIDAACQPITGQMGVSCVIRDDQ 548
+ML W A E + SS+ W KP GW+KIN+D A P G +G V RD Q
Sbjct: 639 TMLESWFHANETLATAVTVPSYSSK-WQKPDYGWIKINVDGAVFPDKGAIG--AVFRDHQ 695
Score = 38.5 bits (88), Expect(3) = 2e-20
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 674 SDAKGVVDAINAEE-GHSYFDTIIDDCRDILKHFNEVLVVFGPRFVNTVAHLLVKATYSM 850
+D VV AI + ++ F II DC D+L+H +V VV+ R N+ AH L S
Sbjct: 739 TDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGACSF 798
Query: 851 SGSGVVSY 874
+ + Y
Sbjct: 799 TSLHIWGY 806
Score = 23.1 bits (48), Expect(3) = 2e-20
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 604 VEAIGLQGALSWTKEWRRNKCKFE 675
VEA+G++ LSW E R++ E
Sbjct: 715 VEALGVREVLSWIHERSRSRIVVE 738
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 92.8 bits (229), Expect(2) = 2e-18
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 3/180 (1%)
Frame = +3
Query: 15 FQQRSCRRVLPTADALGKKFVNISPTCSWCQLNVEDDMHILFGCCFAKEAWLRFGLADVV 194
F RSCR LPT L + VN + TC+ C+ ED MH+ F C +++ W + GL V
Sbjct: 1432 FLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSRQCWQQLGLWSKV 1491
Query: 195 QASPNDNV---MTLLK*VFQSGSREQNGRVGLVCWNLWHRRNN*VWNRINT*SFGIQSRS 365
Q N+ +T+ + + Q Q V W++W +RN+ +W + ++ R
Sbjct: 1492 QQKAQLNLSFGVTMFE-ILQELDSSQRVIWACVMWSIWKQRNDCIWRNEVMTTAAVRDRG 1550
Query: 366 ISMLAEWNRARE*IVKQSKQQHVSSRMWCKPPDGWVKINIDAACQPITGQMGVSCVIRDD 545
+++L W A++ +W KP +G K N+DAA + ++G+ IRDD
Sbjct: 1551 LNLLTGWQNAQD--------------IWRKPDEGHFKCNVDAAFFKESNRVGIGICIRDD 1596
Score = 26.6 bits (57), Expect(2) = 2e-18
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 601 EVEAIGLQGALSWTKEWRRNKCKFE 675
E EAIGL A+ W KE N FE
Sbjct: 1616 EGEAIGLLYAIRWAKEQNLNNITFE 1640
>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
Cytochrome P450 [Medicago truncatula]
Length = 687
Score = 83.6 bits (205), Expect(2) = 5e-14
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 5/183 (2%)
Frame = +3
Query: 15 FQQRSCRRVLPTADALGKKFVNISPTCSWCQLNVEDDMHILFGCCFAKEAWLRFGLADVV 194
F R+CR LPT L K V C+ C ED H+ F C + W R GL +
Sbjct: 381 FLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCSKSMLYWQRIGLWSPL 440
Query: 195 QASPNDNVM--TLLK*VFQSGSREQNGRVGLVCWNLWHRRNN*VWNRINT*SFGIQSRSI 368
A + NV T + + Q ++Q + W++W RNN VWN I + I +R+
Sbjct: 441 MAVFDINVSFPTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNKVWNNITDTAQDICARAG 500
Query: 369 SMLAEWNRARE*IVKQSKQQHVSS---RMWCKPPDGWVKINIDAACQPITGQMGVSCVIR 539
S+L W A+ ++ Q+ S+ W KP G N+DA+ ++G+ IR
Sbjct: 501 SLLTSWRNAQN--IRHPSPQNPSTPNDLKWVKPSPGRFTCNVDASFSQARNRVGIGVCIR 558
Query: 540 DDQ 548
D++
Sbjct: 559 DEE 561
Score = 20.8 bits (42), Expect(2) = 5e-14
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 607 EAIGLQGALSWTKEWRRNKCKFE 675
EA+GL A+ W ++ + FE
Sbjct: 582 EALGLLSAMHWVRDLQLGIVDFE 604
>ref|XP_003593860.1| hypothetical protein MTR_2g018620 [Medicago truncatula]
gi|355482908|gb|AES64111.1| hypothetical protein
MTR_2g018620 [Medicago truncatula]
Length = 221
Score = 78.6 bits (192), Expect = 2e-12
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Frame = +3
Query: 60 LGKKFVNISPTCSWCQLNVEDDMHILFGCCFAKEAWLRFGLADVVQASPNDNVMTLLK*- 236
L ++ N +C C +VE + +LFGC F KE W DVV + MT+
Sbjct: 5 LQERGANCPSSCPVCDNSVEQTIDLLFGCQFNKEVW------DVVCLDVIEKRMTITSSP 58
Query: 237 ---VFQSGSREQN---GRVGLVCWNLWHRRNN*VWNRINT*---SFGIQSRSISMLAEWN 389
+ S + E + ++ +V W+LW RNN +WN + + + S+ +W
Sbjct: 59 HSVILNSCTSEDSILVSKMAMVIWSLWCNRNNIIWNNKRSTPSQQVNVMGMANSLCEDWR 118
Query: 390 RARE*IVKQSKQQHVSS---RMWCKPPDGWVKINIDAACQPITGQMGVSCVIRDDQAVSF 560
A + ++ S + W KPP+GW+K N+DA P G + IRD++
Sbjct: 119 LAN--YISENSLDSCSENPIQSWVKPPEGWLKCNVDAGFHPHQGVSSLGVCIRDEREFLL 176
Query: 561 ELV 569
EL+
Sbjct: 177 ELI 179