BLASTX nr result

ID: Cnidium21_contig00026441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026441
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatul...   185   3e-45
gb|AFK36740.1| unknown [Lotus japonicus]                              185   4e-45
ref|XP_002528249.1| conserved hypothetical protein [Ricinus comm...   184   7e-45
ref|XP_002890995.1| hypothetical protein ARALYDRAFT_473445 [Arab...   182   2e-44
ref|NP_849742.2| lsd one like 1 protein [Arabidopsis thaliana] g...   182   2e-44

>ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatula]
           gi|217075072|gb|ACJ85896.1| unknown [Medicago
           truncatula] gi|217075520|gb|ACJ86120.1| unknown
           [Medicago truncatula] gi|355509677|gb|AES90819.1| Zinc
           finger protein LSD1 [Medicago truncatula]
           gi|388499772|gb|AFK37952.1| unknown [Medicago
           truncatula] gi|388500106|gb|AFK38119.1| unknown
           [Medicago truncatula]
          Length = 154

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/108 (78%), Positives = 92/108 (85%)
 Frame = +1

Query: 1   GSQNQLVCSGCVNLLLYPVGXXXXXXXXXXXXXXXPPPGTEMAQLVCGGCHTLLMYIRGA 180
           G+Q+QLVCSGC NLL+YPVG               PPPGTEMAQLVCGGCHTLLMYIRGA
Sbjct: 29  GAQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGA 88

Query: 181 TSVKCSCCHTVNLAMEANQVAHVNCGNCQMLLMYQYGARSVKCAVCHF 324
           TSV+CSCCHTVNLA+EANQVAHVNCGNC+MLLMYQYGARSVKCAVC+F
Sbjct: 89  TSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNF 136


>gb|AFK36740.1| unknown [Lotus japonicus]
          Length = 145

 Score =  185 bits (469), Expect = 4e-45
 Identities = 85/108 (78%), Positives = 92/108 (85%)
 Frame = +1

Query: 1   GSQNQLVCSGCVNLLLYPVGXXXXXXXXXXXXXXXPPPGTEMAQLVCGGCHTLLMYIRGA 180
           G+Q+QLVCSGC NLL+YPVG               PPPGTEMAQLVCGGCHTLLMYIRGA
Sbjct: 21  GAQSQLVCSGCRNLLVYPVGATSVCCAVCNAVTSVPPPGTEMAQLVCGGCHTLLMYIRGA 80

Query: 181 TSVKCSCCHTVNLAMEANQVAHVNCGNCQMLLMYQYGARSVKCAVCHF 324
           TSV+CSCCHTVNLA+EANQVAHVNCGNC+MLLMYQYGARSVKCAVC+F
Sbjct: 81  TSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNF 128


>ref|XP_002528249.1| conserved hypothetical protein [Ricinus communis]
           gi|223532335|gb|EEF34134.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score =  184 bits (467), Expect = 7e-45
 Identities = 84/108 (77%), Positives = 91/108 (84%)
 Frame = +1

Query: 1   GSQNQLVCSGCVNLLLYPVGXXXXXXXXXXXXXXXPPPGTEMAQLVCGGCHTLLMYIRGA 180
           G+Q+QLVCSGC NLLLYP G               PPPGTEMAQLVCGGCHTLLMYIRGA
Sbjct: 23  GAQSQLVCSGCRNLLLYPAGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGA 82

Query: 181 TSVKCSCCHTVNLAMEANQVAHVNCGNCQMLLMYQYGARSVKCAVCHF 324
           TSV+CSCCHT+NLAMEANQVAHVNCGNC+MLLMYQYGARSVKC+VC+F
Sbjct: 83  TSVQCSCCHTINLAMEANQVAHVNCGNCRMLLMYQYGARSVKCSVCNF 130


>ref|XP_002890995.1| hypothetical protein ARALYDRAFT_473445 [Arabidopsis lyrata subsp.
           lyrata] gi|297336837|gb|EFH67254.1| hypothetical protein
           ARALYDRAFT_473445 [Arabidopsis lyrata subsp. lyrata]
          Length = 154

 Score =  182 bits (463), Expect = 2e-44
 Identities = 84/106 (79%), Positives = 90/106 (84%)
 Frame = +1

Query: 7   QNQLVCSGCVNLLLYPVGXXXXXXXXXXXXXXXPPPGTEMAQLVCGGCHTLLMYIRGATS 186
           Q+QLVCSGC NLL+YPVG               PPPGTEMAQLVCGGCHTLLMYIRGATS
Sbjct: 32  QSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATS 91

Query: 187 VKCSCCHTVNLAMEANQVAHVNCGNCQMLLMYQYGARSVKCAVCHF 324
           V+CSCCHTVNLA+EANQVAHVNCGNC+MLLMYQYGARSVKCAVC+F
Sbjct: 92  VQCSCCHTVNLALEANQVAHVNCGNCKMLLMYQYGARSVKCAVCNF 137


>ref|NP_849742.2| lsd one like 1 protein [Arabidopsis thaliana]
           gi|332193378|gb|AEE31499.1| lsd one like 1 protein
           [Arabidopsis thaliana]
          Length = 187

 Score =  182 bits (462), Expect = 2e-44
 Identities = 84/106 (79%), Positives = 89/106 (83%)
 Frame = +1

Query: 7   QNQLVCSGCVNLLLYPVGXXXXXXXXXXXXXXXPPPGTEMAQLVCGGCHTLLMYIRGATS 186
           Q+QLVCSGC NLL+YPVG               PPPGTEMAQLVCGGCHTLLMYIRGATS
Sbjct: 65  QSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATS 124

Query: 187 VKCSCCHTVNLAMEANQVAHVNCGNCQMLLMYQYGARSVKCAVCHF 324
           V+CSCCHTVNLA+EANQVAHVNCGNC MLLMYQYGARSVKCAVC+F
Sbjct: 125 VQCSCCHTVNLALEANQVAHVNCGNCMMLLMYQYGARSVKCAVCNF 170


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