BLASTX nr result

ID: Cnidium21_contig00026400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026400
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278358.1| PREDICTED: uncharacterized protein LOC100241...   100   1e-19
ref|XP_002298011.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002509861.1| conserved hypothetical protein [Ricinus comm...    97   1e-18
ref|NP_198971.1| DET1- and DDB1-associated protein 1 [Arabidopsi...    88   6e-16
ref|XP_002868586.1| hypothetical protein ARALYDRAFT_493832 [Arab...    87   1e-15

>ref|XP_002278358.1| PREDICTED: uncharacterized protein LOC100241601 [Vitis vinifera]
           gi|297742241|emb|CBI34390.3| unnamed protein product
           [Vitis vinifera]
          Length = 95

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/66 (74%), Positives = 52/66 (78%)
 Frame = -2

Query: 303 KMKPITYHPTHNRTLPPPDQVISSEAKNILLRHFYMRAEEKLRSKIATSESLTPEQARKH 124
           KM P TYHPTH+RTLPPPDQVIS+E KNILLRHFY RAEEKLR K A SE LTPE   K 
Sbjct: 29  KMIPATYHPTHDRTLPPPDQVISTETKNILLRHFYQRAEEKLRPKRAASEHLTPEHGCKQ 88

Query: 123 SRSSTS 106
            R+S S
Sbjct: 89  PRASAS 94


>ref|XP_002298011.1| predicted protein [Populus trichocarpa] gi|222845269|gb|EEE82816.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/66 (72%), Positives = 54/66 (81%)
 Frame = -2

Query: 303 KMKPITYHPTHNRTLPPPDQVISSEAKNILLRHFYMRAEEKLRSKIATSESLTPEQARKH 124
           KM P TYHPTH+RTLPPPDQVI++EAKNILLR+FY RAEEKLR K A SE L PE   K 
Sbjct: 29  KMTPATYHPTHSRTLPPPDQVITTEAKNILLRNFYERAEEKLRQKRAASEHLMPEHGCKQ 88

Query: 123 SRSSTS 106
           +R+STS
Sbjct: 89  ARASTS 94


>ref|XP_002509861.1| conserved hypothetical protein [Ricinus communis]
           gi|223549760|gb|EEF51248.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 66

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/65 (72%), Positives = 54/65 (83%)
 Frame = -2

Query: 300 MKPITYHPTHNRTLPPPDQVISSEAKNILLRHFYMRAEEKLRSKIATSESLTPEQARKHS 121
           M P TYHPTH+RTLPPPDQVI++EAKNILLR+FY RAEEKLR+K A SE+L PE   K  
Sbjct: 1   MTPATYHPTHSRTLPPPDQVITTEAKNILLRNFYERAEEKLRTKRAASENLIPEHGCKQP 60

Query: 120 RSSTS 106
           R+STS
Sbjct: 61  RASTS 65


>ref|NP_198971.1| DET1- and DDB1-associated protein 1 [Arabidopsis thaliana]
           gi|10178010|dbj|BAB11462.1| unnamed protein product
           [Arabidopsis thaliana] gi|30725336|gb|AAP37690.1|
           At5g41560 [Arabidopsis thaliana]
           gi|110736600|dbj|BAF00265.1| hypothetical protein
           [Arabidopsis thaliana] gi|332007309|gb|AED94692.1| DET1-
           and DDB1-associated protein 1 [Arabidopsis thaliana]
          Length = 101

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/66 (62%), Positives = 49/66 (74%)
 Frame = -2

Query: 303 KMKPITYHPTHNRTLPPPDQVISSEAKNILLRHFYMRAEEKLRSKIATSESLTPEQARKH 124
           KM P TY PTHNRTLPPPDQVI++E KNIL+R FY RAEEKLR K   ++ L  E   KH
Sbjct: 29  KMVPTTYRPTHNRTLPPPDQVITTEVKNILIRSFYQRAEEKLRPKRPATDHLAAEHVNKH 88

Query: 123 SRSSTS 106
            R+++S
Sbjct: 89  FRAASS 94


>ref|XP_002868586.1| hypothetical protein ARALYDRAFT_493832 [Arabidopsis lyrata subsp.
           lyrata] gi|297314422|gb|EFH44845.1| hypothetical protein
           ARALYDRAFT_493832 [Arabidopsis lyrata subsp. lyrata]
          Length = 101

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/66 (60%), Positives = 49/66 (74%)
 Frame = -2

Query: 303 KMKPITYHPTHNRTLPPPDQVISSEAKNILLRHFYMRAEEKLRSKIATSESLTPEQARKH 124
           +M P TY PTHNRTLPPPDQVI++E KNIL+R FY RAEEKLR K   ++ L  E   KH
Sbjct: 29  RMVPTTYRPTHNRTLPPPDQVITTEVKNILIRSFYQRAEEKLRPKRPATDHLAAEHVNKH 88

Query: 123 SRSSTS 106
            R+++S
Sbjct: 89  FRAASS 94


Top