BLASTX nr result

ID: Cnidium21_contig00026399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026399
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19201.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|NP_001236345.1| uncharacterized protein LOC100306274 [Glycin...   162   3e-38
ref|XP_002285745.1| PREDICTED: 39S ribosomal protein L41-A, mito...   162   5e-38
ref|XP_002531113.1| conserved hypothetical protein [Ricinus comm...   159   3e-37
ref|XP_003526569.1| PREDICTED: 39S ribosomal protein L41-A, mito...   158   7e-37

>emb|CBI19201.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  163 bits (413), Expect = 2e-38
 Identities = 79/100 (79%), Positives = 87/100 (87%)
 Frame = -3

Query: 574 RRN*EGSVMVLGLILGIGRAFRRKRASSLDILSSKRGPRDYYKGKNCKPTGFHTRKGGYV 395
           RR  + + M LGLILGIGRAFRRKR SSLDILSSKR PRDYYKGKNCKPTGFHTRKGGYV
Sbjct: 71  RRGTQTTGMALGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV 130

Query: 394 VVQEKLPNYVVPDLTDFKLKPYVAQCAVEAQTSGAANAAK 275
           ++QEKLPNYVVPDLTDFKLKPYV+QC  E +T+ A  AA+
Sbjct: 131 LMQEKLPNYVVPDLTDFKLKPYVSQCPREVKTNEATEAAQ 170


>ref|NP_001236345.1| uncharacterized protein LOC100306274 [Glycine max]
           gi|255628073|gb|ACU14381.1| unknown [Glycine max]
          Length = 92

 Score =  162 bits (411), Expect = 3e-38
 Identities = 78/92 (84%), Positives = 82/92 (89%)
 Frame = -3

Query: 550 MVLGLILGIGRAFRRKRASSLDILSSKRGPRDYYKGKNCKPTGFHTRKGGYVVVQEKLPN 371
           M LGLILGIGRAFRRKR SSLDILSSKR PR YYKGKNCKPTGFHTRKGGYVV+QEKLPN
Sbjct: 1   MPLGLILGIGRAFRRKRPSSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVVMQEKLPN 60

Query: 370 YVVPDLTDFKLKPYVAQCAVEAQTSGAANAAK 275
           YVVPDLTDFKLKPY +QC +EA TS A+  AK
Sbjct: 61  YVVPDLTDFKLKPYASQCPIEANTSEASQTAK 92


>ref|XP_002285745.1| PREDICTED: 39S ribosomal protein L41-A, mitochondrial [Vitis
           vinifera] gi|147843318|emb|CAN82662.1| hypothetical
           protein VITISV_004928 [Vitis vinifera]
          Length = 97

 Score =  162 bits (409), Expect = 5e-38
 Identities = 77/92 (83%), Positives = 83/92 (90%)
 Frame = -3

Query: 550 MVLGLILGIGRAFRRKRASSLDILSSKRGPRDYYKGKNCKPTGFHTRKGGYVVVQEKLPN 371
           M LGLILGIGRAFRRKR SSLDILSSKR PRDYYKGKNCKPTGFHTRKGGYV++QEKLPN
Sbjct: 1   MALGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLMQEKLPN 60

Query: 370 YVVPDLTDFKLKPYVAQCAVEAQTSGAANAAK 275
           YVVPDLTDFKLKPYV+QC  E +T+ A  AA+
Sbjct: 61  YVVPDLTDFKLKPYVSQCPREVKTNEATEAAQ 92


>ref|XP_002531113.1| conserved hypothetical protein [Ricinus communis]
           gi|223529309|gb|EEF31278.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 92

 Score =  159 bits (402), Expect = 3e-37
 Identities = 75/92 (81%), Positives = 82/92 (89%)
 Frame = -3

Query: 550 MVLGLILGIGRAFRRKRASSLDILSSKRGPRDYYKGKNCKPTGFHTRKGGYVVVQEKLPN 371
           M LGLILGIGRAFRRKR S+LDILSSKR P DYYKGKNCKPTGFHTRKGGYV+V EKLPN
Sbjct: 1   MALGLILGIGRAFRRKRTSALDILSSKRAPHDYYKGKNCKPTGFHTRKGGYVIVPEKLPN 60

Query: 370 YVVPDLTDFKLKPYVAQCAVEAQTSGAANAAK 275
           YVVPDLTDFKLKPYV+QCA + +T+ A+ A K
Sbjct: 61  YVVPDLTDFKLKPYVSQCATQIKTTEASAAKK 92


>ref|XP_003526569.1| PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Glycine
           max]
          Length = 88

 Score =  158 bits (399), Expect = 7e-37
 Identities = 75/85 (88%), Positives = 79/85 (92%)
 Frame = -3

Query: 550 MVLGLILGIGRAFRRKRASSLDILSSKRGPRDYYKGKNCKPTGFHTRKGGYVVVQEKLPN 371
           M LGLILGIGRAFRRKR SSLDILSSKR PR YYKGKNCKPTGFHTRKGGYVV+QEKLPN
Sbjct: 1   MPLGLILGIGRAFRRKRPSSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVVMQEKLPN 60

Query: 370 YVVPDLTDFKLKPYVAQCAVEAQTS 296
           YVVPDL+DFKLKPYV+QC +EA TS
Sbjct: 61  YVVPDLSDFKLKPYVSQCPIEANTS 85


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