BLASTX nr result

ID: Cnidium21_contig00026396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026396
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282200.1| PREDICTED: uncharacterized protein LOC100258...    77   2e-12
emb|CAN67621.1| hypothetical protein VITISV_014711 [Vitis vinifera]    77   2e-12
emb|CBI30311.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002308467.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002530331.1| gtpase activating protein, putative [Ricinus...    57   1e-06

>ref|XP_002282200.1| PREDICTED: uncharacterized protein LOC100258031 [Vitis vinifera]
          Length = 533

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 16/122 (13%)
 Frame = -2

Query: 471 HGSVSSTEDIILPGNSYLTDDCPYESPSQVDTKSDTCEDDDNKISTKGTPWNMSKTRHGQ 292
           H  ++S E+II  GN  + + CP + P Q +T +D  E   +     G   N  K+R GQ
Sbjct: 412 HSFLTSIENIIPGGNGPVVESCPCDPPPQANTSTDEVEWAPSIGQNGGAQPNTVKSRTGQ 471

Query: 291 SSNSSFKRWSRKTNER-------PLVPEAAD---------KSRGSTIVSRLNSRMERVEA 160
           SSNS+ K+  RK +E+       P+   A+          KSRG++IVSR+NSR ERVEA
Sbjct: 472 SSNSNLKKGYRKISEQSPARAAGPIARAASPIARAASPIMKSRGTSIVSRINSRAERVEA 531

Query: 159 WR 154
           WR
Sbjct: 532 WR 533


>emb|CAN67621.1| hypothetical protein VITISV_014711 [Vitis vinifera]
          Length = 533

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 16/122 (13%)
 Frame = -2

Query: 471 HGSVSSTEDIILPGNSYLTDDCPYESPSQVDTKSDTCEDDDNKISTKGTPWNMSKTRHGQ 292
           H  ++S E+II  GN  + + CP + P Q +T +D  E   +     G   N  K+R GQ
Sbjct: 412 HSFLTSIENIIPGGNGPVVESCPCDPPPQANTSTDEVEWAPSIGQNGGAQPNTVKSRTGQ 471

Query: 291 SSNSSFKRWSRKTNER-------PLVPEAAD---------KSRGSTIVSRLNSRMERVEA 160
           SSNS+ K+  RK +E+       P+   A+          KSRG++IVSR+NSR ERVEA
Sbjct: 472 SSNSNLKKGYRKISEQSPARAAGPIARAASPIARAASPIMKSRGTSIVSRINSRAERVEA 531

Query: 159 WR 154
           WR
Sbjct: 532 WR 533


>emb|CBI30311.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/106 (40%), Positives = 60/106 (56%)
 Frame = -2

Query: 471 HGSVSSTEDIILPGNSYLTDDCPYESPSQVDTKSDTCEDDDNKISTKGTPWNMSKTRHGQ 292
           H  ++S E+II  GN  + + CP + P Q +T +D  E   +     G   N  K+R GQ
Sbjct: 295 HSFLTSIENIIPGGNGPVVESCPCDPPPQANTSTDEVEWAPSIGQNGGAQPNTVKSRTGQ 354

Query: 291 SSNSSFKRWSRKTNERPLVPEAADKSRGSTIVSRLNSRMERVEAWR 154
           SSNS+ K+  RK +E           +G++IVSR+NSR ERVEAWR
Sbjct: 355 SSNSNLKKGYRKISE-----------QGTSIVSRINSRAERVEAWR 389


>ref|XP_002308467.1| predicted protein [Populus trichocarpa] gi|222854443|gb|EEE91990.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
 Frame = -2

Query: 468 GSVSSTEDIILPGNSY-LTDDCPYESPSQVDTKSDTCEDDDNKISTKGTPWNMSKTRHGQ 292
           G +SS E+I  PG  + L D+CP E  SQV+   +   +  +   T G      K++ GQ
Sbjct: 410 GFLSSIENI--PGGRWSLVDNCPCEVVSQVNALKNEHHEGGHTYKTGGVQTRSCKSKTGQ 467

Query: 291 SSNSSFKRWSRKTNERPLVPEA--ADKSRGSTIVSRLNSRMERVEAWR 154
           SSNS+ KR S+K  E+ +V  A   +K  G+ IV  +N + E  EAWR
Sbjct: 468 SSNSTLKRGSKKVKEQLIVRAAGPVEKGEGTGIVGHINPKTELFEAWR 515


>ref|XP_002530331.1| gtpase activating protein, putative [Ricinus communis]
           gi|223530135|gb|EEF32047.1| gtpase activating protein,
           putative [Ricinus communis]
          Length = 405

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = -2

Query: 462 VSSTEDIILPGNSYLTDDCPYESPSQVDTKSDTCEDDDNKISTKGTPWNMSKTRHGQSSN 283
           ++S E+I   GN  L D+CP E  SQV   ++    +      +G      K R GQSSN
Sbjct: 302 LTSIENIPTGGNWSLVDNCPCEVVSQVSALTNE-NLEGGFTRARGVQLRTCKNRTGQSSN 360

Query: 282 SSFKRWSRKTNERPLVPEAA--DKSRGSTIVSRLNSRMERVEAWR 154
           S+ ++ S++  E+ +   A   +KS+G+ IV  +N R E  EAWR
Sbjct: 361 SNSRKGSKRVIEQAIARAAGPVEKSKGAGIVGSINPRTELSEAWR 405


Top