BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026345
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632859.1| PREDICTED: pentatricopeptide repeat-containi...   190   2e-46
ref|XP_004141838.1| PREDICTED: pentatricopeptide repeat-containi...   175   8e-42
ref|XP_003626978.1| hypothetical protein MTR_8g013670 [Medicago ...   154   1e-35
ref|XP_002875401.1| hypothetical protein ARALYDRAFT_905030 [Arab...   154   1e-35
ref|NP_189412.1| uncharacterized protein [Arabidopsis thaliana] ...   154   2e-35

>ref|XP_003632859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Vitis vinifera]
           gi|297743240|emb|CBI36107.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  190 bits (483), Expect = 2e-46
 Identities = 105/204 (51%), Positives = 141/204 (69%), Gaps = 18/204 (8%)
 Frame = -3

Query: 586 PLSKPQFTV--------RCGPRDKRGPLVKGRILSIEAIQAVQSLKRSPQNDAV------ 449
           P+ KP  T+        RCGPRD RGPL+KGR+LSIEAIQA+QSLKR+ + D        
Sbjct: 15  PIKKPVQTITTTSYTPIRCGPRDNRGPLMKGRVLSIEAIQAIQSLKRAHRGDPTKIDDFL 74

Query: 448 ---LTRLLKSDLIAAFNELLRQEQIELAVKVLSAIRSELWYTSDLSMHANLVSALGRKGK 278
              L+RL+K+DL+A  NELLRQ+Q +LA++V SA+RSELWY ++LS++A+LVSAL RKG 
Sbjct: 75  SKTLSRLVKADLLATLNELLRQDQCDLALRVFSAVRSELWYKTELSLYADLVSALARKGM 134

Query: 277 REEIDR-XXXXXXXXXXXSDNMRLIMLIKAVVNAGRVESAKRIYEIMRRSGWGAADDYVI 101
           +EEIDR             D+  ++ L+KAV+ A R +S  RIY +M+RSG G  D+YV 
Sbjct: 135 KEEIDRLICDLEGEGSVRCDDKGIVRLVKAVIAAERRDSTVRIYGLMKRSGCGGGDEYVG 194

Query: 100 KVLSNGLRRLGEENVANDLLRDFG 29
           +VLS GLRRLGE  VA+++  +FG
Sbjct: 195 RVLSRGLRRLGELGVADEVDLEFG 218


>ref|XP_004141838.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449491766|ref|XP_004158997.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
          Length = 230

 Score =  175 bits (443), Expect = 8e-42
 Identities = 101/195 (51%), Positives = 130/195 (66%), Gaps = 16/195 (8%)
 Frame = -3

Query: 568 FTVRCGPRDKRGPLVKGRILSIEAIQAVQSLKRSPQND---------AVLTRLLKSDLIA 416
           F VRCGPRD RGPLVKGR LSIEAIQA+QSLKR+ ++D           L+RLLK+DL+A
Sbjct: 31  FRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVA 90

Query: 415 AFNELLRQEQIELAVKVLSAIRSELWYTSDLSMHANLVSALGRKGKREEIDR----XXXX 248
              ELLRQE+  LA++V + I+SE  Y ++L ++A + +AL R G  EEIDR        
Sbjct: 91  TLKELLRQERCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGG 148

Query: 247 XXXXXXXSDNMRLIMLIKAVVNAGRVESAKRIYEIMRRSGWGA---ADDYVIKVLSNGLR 77
                   D+  LI LIKAV++  R ES  RIY +MRR GWG+   ADDY+IKVLS GLR
Sbjct: 149 DGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSKGLR 208

Query: 76  RLGEENVANDLLRDF 32
           RLGE  +A+++ R+F
Sbjct: 209 RLGEIELADEINREF 223


>ref|XP_003626978.1| hypothetical protein MTR_8g013670 [Medicago truncatula]
           gi|355521000|gb|AET01454.1| hypothetical protein
           MTR_8g013670 [Medicago truncatula]
          Length = 239

 Score =  154 bits (390), Expect = 1e-35
 Identities = 90/203 (44%), Positives = 126/203 (62%), Gaps = 18/203 (8%)
 Frame = -3

Query: 586 PLSKPQFTVRCG-PRDKRGPLVKGRILSIEAIQAVQSLKR----SPQNDA-------VLT 443
           P  +    V CG PR +RGPL+KGR LSIEAIQA+Q+LKR    +PQ           LT
Sbjct: 25  PTRRSYIPVHCGGPRSQRGPLIKGRFLSIEAIQAIQTLKRINRINPQTQTETQLQTKTLT 84

Query: 442 RLLKSDLIAAFNELLRQEQIELAVKVLSAIRSELWYTSDLSMHANLVSALGRKGKREEID 263
           RL+KSDL+A   ELLRQEQ  LA++V SA+RSE  Y +DL+++A ++  LG  G  E++D
Sbjct: 85  RLIKSDLVATLKELLRQEQPTLALRVFSAVRSE--YGADLTLYAEMLKVLGNCGMYEDVD 142

Query: 262 R---XXXXXXXXXXXSDNMRLIMLIKAVVNAGRVESAKRIYEIMRRSGWGAA---DDYVI 101
           R               D   ++ LIKAV+ A R +   R+YE+++RSGWG     D+YV+
Sbjct: 143 RLIEEIEVGGGIGCDEDPKGVLSLIKAVIGAKRRDLLVRVYEMLKRSGWGEVVEFDEYVV 202

Query: 100 KVLSNGLRRLGEENVANDLLRDF 32
           KVLSNG +  G++ +A ++L D+
Sbjct: 203 KVLSNGFKGFGDDELAQEILNDY 225


>ref|XP_002875401.1| hypothetical protein ARALYDRAFT_905030 [Arabidopsis lyrata subsp.
           lyrata] gi|297321239|gb|EFH51660.1| hypothetical protein
           ARALYDRAFT_905030 [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score =  154 bits (389), Expect = 1e-35
 Identities = 90/182 (49%), Positives = 122/182 (67%), Gaps = 11/182 (6%)
 Frame = -3

Query: 565 TVRCGPRDKRGPLVKGRILSIEAIQAVQSLKRSPQNDA-------VLTRLLKSDLIAAFN 407
           ++RCGPRD RGPL+KGRILS EAIQ++QSLKR+ +  +        L RL+KSDL++   
Sbjct: 28  SIRCGPRDNRGPLLKGRILSTEAIQSIQSLKRAHRTGSSISLTLRPLRRLIKSDLVSVLR 87

Query: 406 ELLRQEQIELAVKVLSAIRSELWYTSDLSMHANLVSALGRKGKREEIDRXXXXXXXXXXX 227
           ELLRQ+   LAV VLS +RSE +   DL ++A++V+AL R  + +EIDR           
Sbjct: 88  ELLRQDYCTLAVHVLSTLRSE-YPPLDLVLYADIVNALSRNKEFDEIDRLIGEIEIIDQR 146

Query: 226 SDNMRLIMLIKAVVNAGRVESAKRIYEIMRRSGWGA----ADDYVIKVLSNGLRRLGEEN 59
           SD+  L  LI+AVV A R ES  R+Y ++R SGWG+    AD+YV +VLS GL RLGE++
Sbjct: 147 SDDKALAKLIRAVVGAERRESVVRVYTLLRESGWGSESWEADEYVAEVLSKGLLRLGEQD 206

Query: 58  VA 53
           +A
Sbjct: 207 LA 208


>ref|NP_189412.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9294480|dbj|BAB02699.1| unnamed protein product
           [Arabidopsis thaliana] gi|49660179|gb|AAT68380.1|
           hypothetical protein At3g27750 [Arabidopsis thaliana]
           gi|60547779|gb|AAX23853.1| hypothetical protein
           At3g27750 [Arabidopsis thaliana]
           gi|332643839|gb|AEE77360.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 222

 Score =  154 bits (388), Expect = 2e-35
 Identities = 91/185 (49%), Positives = 123/185 (66%), Gaps = 11/185 (5%)
 Frame = -3

Query: 565 TVRCGPRDKRGPLVKGRILSIEAIQAVQSLKRSPQNDAVLT-------RLLKSDLIAAFN 407
           ++RCGPRD RGPL+KGRILS EAIQ++QSLKR+ +    L+       RL+KSDLI+   
Sbjct: 30  SIRCGPRDNRGPLLKGRILSTEAIQSIQSLKRAHRTGVSLSLTLRPLRRLIKSDLISVLR 89

Query: 406 ELLRQEQIELAVKVLSAIRSELWYTSDLSMHANLVSALGRKGKREEIDRXXXXXXXXXXX 227
           ELLRQ+   LAV VLS +R+E +   DL ++A++V+AL R  + +EIDR           
Sbjct: 90  ELLRQDYCTLAVHVLSTLRTE-YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGIDQR 148

Query: 226 SDNMRLIMLIKAVVNAGRVESAKRIYEIMRRSGWGA----ADDYVIKVLSNGLRRLGEEN 59
           SD+  L  LI+AVV A R ES  R+Y +MR SGWG+    AD+YV +VLS GL RLGE +
Sbjct: 149 SDDKALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSKGLLRLGEPD 208

Query: 58  VANDL 44
           +A+ +
Sbjct: 209 LASQV 213