BLASTX nr result

ID: Cnidium21_contig00026334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026334
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...   205   4e-51
ref|XP_002319561.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   194   6e-48
emb|CBI36742.3| unnamed protein product [Vitis vinifera]              194   8e-48
ref|XP_002328426.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-47

>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
           gi|223548304|gb|EEF49795.1| ring finger protein,
           putative [Ricinus communis]
          Length = 380

 Score =  205 bits (521), Expect = 4e-51
 Identities = 101/161 (62%), Positives = 122/161 (75%), Gaps = 2/161 (1%)
 Frame = -1

Query: 506 AKFSPSMAIIIAVLVTALFFMGFFSIYLRRCADTTTGGSMRPTLS--LRRRAAVSRGLSE 333
           A+ +PSMAIII VL+ ALFFMGFFS+Y+R CA+++ G S++   +    RRAA +RGL  
Sbjct: 38  ARVTPSMAIIIVVLIAALFFMGFFSVYIRHCANSSNGVSVQGLANGGRSRRAAAARGLDA 97

Query: 332 EVITTFPTMAYSEVKDLKIGKGALECAVCLNEFEDDETLRLLPKCDHVFHPECIDLWLAS 153
            VI TFPT+ YSEVK LKIGKGALECAVCL EFEDDETLRLLPKCDHVFHP+CID WLAS
Sbjct: 98  AVIETFPTLVYSEVKGLKIGKGALECAVCLCEFEDDETLRLLPKCDHVFHPDCIDAWLAS 157

Query: 152 HVTCPVCRADLVPKPVDSDELLARSETENVVDQENRDEIEV 30
           H TCPVCR++L P+PVD       S  ++  D E ++E  V
Sbjct: 158 HTTCPVCRSNLTPQPVDPPTQTTESLPDSSSDLEAQNEAVV 198


>ref|XP_002319561.1| predicted protein [Populus trichocarpa] gi|222857937|gb|EEE95484.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  196 bits (497), Expect = 2e-48
 Identities = 97/138 (70%), Positives = 108/138 (78%), Gaps = 2/138 (1%)
 Frame = -1

Query: 506 AKFSPSMAIIIAVLVTALFFMGFFSIYLRRCADTTTGGSMRP--TLSLRRRAAVSRGLSE 333
           A+ +PSMAIII VLV ALF MGFFSIY+R C + +  GS+R    + L RRAA SRGL  
Sbjct: 32  AQVTPSMAIIIVVLVAALFSMGFFSIYIRHCNEASANGSIRALGVVGLSRRAAASRGLDP 91

Query: 332 EVITTFPTMAYSEVKDLKIGKGALECAVCLNEFEDDETLRLLPKCDHVFHPECIDLWLAS 153
            VI TFPT+ YS VK LKIGKGALECAVCLNEFEDDETLRL+P CDHVFHP+CID WL S
Sbjct: 92  GVIETFPTLIYSVVKGLKIGKGALECAVCLNEFEDDETLRLIPNCDHVFHPDCIDAWLES 151

Query: 152 HVTCPVCRADLVPKPVDS 99
           H TCPVCRADL  KP D+
Sbjct: 152 HTTCPVCRADLT-KPADT 168


>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  194 bits (493), Expect = 6e-48
 Identities = 98/166 (59%), Positives = 117/166 (70%), Gaps = 7/166 (4%)
 Frame = -1

Query: 503 KFSPSMAIIIAVLVTALFFMGFFSIYLRRCADTTTGGSMRPTL--SLRRRAAVSRGLSEE 330
           +FS SMAIII +LV ALF MGFFS+Y+R C+D+  GGS+R     +L R    +RGL + 
Sbjct: 59  RFSSSMAIIIVILVAALFLMGFFSVYIRHCSDSRNGGSIRAAAGAALGRSRRGTRGLDQA 118

Query: 329 VITTFPTMAYSEVKDLKIGKGALECAVCLNEFEDDETLRLLPKCDHVFHPECIDLWLASH 150
           V+ TFPT  YS VK LKIGKG LECAVCLNEFED+ETLRL+PKCDHVFHPECID WLASH
Sbjct: 119 VLETFPTFEYSVVKGLKIGKGVLECAVCLNEFEDNETLRLIPKCDHVFHPECIDAWLASH 178

Query: 149 VTCPVCRADLVPKPVDSDELLARSETENVVD-----QENRDEIEVV 27
           VTCPVCRA+L    V +D   A    E+  +     ++ R EI  V
Sbjct: 179 VTCPVCRANLTEPAVPTDYSAAVEAAESAGESDHDGEDRRSEINAV 224


>emb|CBI36742.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  194 bits (492), Expect = 8e-48
 Identities = 95/157 (60%), Positives = 114/157 (72%), Gaps = 2/157 (1%)
 Frame = -1

Query: 503 KFSPSMAIIIAVLVTALFFMGFFSIYLRRCADTTTGGSMRPTL--SLRRRAAVSRGLSEE 330
           +FS SMAIII +LV ALF MGFFS+Y+R C+D+  GGS+R     +L R    +RGL + 
Sbjct: 87  RFSSSMAIIIVILVAALFLMGFFSVYIRHCSDSRNGGSIRAAAGAALGRSRRGTRGLDQA 146

Query: 329 VITTFPTMAYSEVKDLKIGKGALECAVCLNEFEDDETLRLLPKCDHVFHPECIDLWLASH 150
           V+ TFPT  YS VK LKIGKG LECAVCLNEFED+ETLRL+PKCDHVFHPECID WLASH
Sbjct: 147 VLETFPTFEYSVVKGLKIGKGVLECAVCLNEFEDNETLRLIPKCDHVFHPECIDAWLASH 206

Query: 149 VTCPVCRADLVPKPVDSDELLARSETENVVDQENRDE 39
           VTCPVCRA+L    V +D   A    E+  + ++  E
Sbjct: 207 VTCPVCRANLTEPAVPTDYSAAVEAAESAGESDHDGE 243


>ref|XP_002328426.1| predicted protein [Populus trichocarpa] gi|222838141|gb|EEE76506.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  192 bits (487), Expect = 3e-47
 Identities = 103/173 (59%), Positives = 116/173 (67%), Gaps = 11/173 (6%)
 Frame = -1

Query: 506 AKFSPSMAIIIAVLVTALFFMGFFSIYLRRCADTTTGGSMRPTL--SLRRRAAVSRGLSE 333
           A+ +PSMAIII VL+  LF MGFFSIY+R C +    GS+RP     L RR A SRGL  
Sbjct: 33  ARVTPSMAIIIVVLIAVLFIMGFFSIYIRHCNEANGNGSIRPLGMGGLSRRVAASRGLDP 92

Query: 332 EVITTFPTMAYSEVKDLKIGKGALECAVCLNEFEDDETLRLLPKCDHVFHPECIDLWLAS 153
            VI TFPT+ YS VK LKIGKGALECAVCLNEFE+DETLRL+P CDHVFHP+CI  WL S
Sbjct: 93  AVIETFPTLIYSVVKGLKIGKGALECAVCLNEFEEDETLRLIPNCDHVFHPDCIGAWLES 152

Query: 152 HVTCPVCRADLVPKPVDSDELLARS-------ETEN--VVDQENRDEIEVVVV 21
           H TCPVCRADL  KP DS   L  S       E +N  V+D+       V VV
Sbjct: 153 HTTCPVCRADLT-KPADSVPQLGESHDPELDLEAQNGAVMDEPENGNANVEVV 204


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