BLASTX nr result

ID: Cnidium21_contig00026328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026328
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   122   2e-25
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...   119   1e-24
ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cuc...   113   9e-23
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   113   9e-23
ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc...   111   3e-22

>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  122 bits (305), Expect = 2e-25
 Identities = 85/240 (35%), Positives = 120/240 (50%), Gaps = 4/240 (1%)
 Frame = -1

Query: 710 RVPYRKLKSFKCVSKKWLYLITTPQFNRLLCNLLPALRASGLFIQRPPIARFGQPCPNEV 531
           R P + L  F+ VSK+WL LI+ P F    C+   A R+S       P    G P  N  
Sbjct: 45  RTPVKPLLRFRSVSKRWLSLISDPHF----CHR-HARRSSASV----PGVLLGLPNSN-F 94

Query: 530 YFVSLDDPNTPSP-FKTLAFADDPFDPERIRILGSCNGLLLCSTCLLAFRETITNYVYNP 354
            F+S D+     P  ++L F  DP     +++L  CNGLL CST + +   +   Y+ N 
Sbjct: 95  DFISFDEKKASEPPLRSLDFIGDPLG---VKVLQVCNGLLCCST-VRSLGTSRNYYICNL 150

Query: 353 STNQLAILPKHPPANGVDY---LSLAFDPSKSPHYKVIAYVTTSQSDSIGDFHVYSSETG 183
           +T + ++LP    + G D    ++LAFDPSKSP+Y VI   +   S S     +YSS TG
Sbjct: 151 ATRRFSVLPPPCSSGGRDTVFGINLAFDPSKSPYYSVICVRSCEVSISHYQIEIYSSGTG 210

Query: 182 TWRLSVQSFYLARHMYLNSGVYWHGCIYWLGDLNFEPVPGSTVSYGLYFNVDEGRLGTFP 3
            WRLS + F     M    GV+W+G ++W+          S     LYF +DEGR+ T P
Sbjct: 211 DWRLSGKPFRAPFDMVFYDGVFWNGAVHWI----------SPSGASLYFGIDEGRIDTMP 260


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score =  119 bits (299), Expect = 1e-24
 Identities = 89/262 (33%), Positives = 123/262 (46%), Gaps = 6/262 (2%)
 Frame = -1

Query: 770 SQFNFEIVXXXXXXXXXXXLRVPYRKLKSFKCVSKKWLYLITTPQFNRLLCNLLPALRAS 591
           S  + EI+           LR+P + L  FK VSK+WL LI+TP F+ L     P    S
Sbjct: 3   SSLSAEIIGSNEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNHTIS 62

Query: 590 GLFIQRPPIARFGQPCPNEVYFVSLDDPNTPSPFKTLAFADDPFDPERIRILGSCNGLLL 411
            LF++  P+         E  F+SL   ++ S       + D F    I+IL SCNGLLL
Sbjct: 63  ALFLRNSPL---------EFKFLSLSSSSSSSSSSASPLSFDLF--HGIKILQSCNGLLL 111

Query: 410 CSTCLLAFRETITNYVYNPSTNQLAILPKHP-PANGVDY-----LSLAFDPSKSPHYKVI 249
           CST L    +    Y+ NP+T Q+  LP     AN         L+LAFDP KS +YKVI
Sbjct: 112 CST-LPKIGQKRNYYISNPTTKQMFTLPSLVGDANAASPTTLFGLNLAFDPLKSCNYKVI 170

Query: 248 AYVTTSQSDSIGDFHVYSSETGTWRLSVQSFYLARHMYLNSGVYWHGCIYWLGDLNFEPV 69
              +T+ S        Y SE   WRLS   F     M  ++GV+W+G I+W+        
Sbjct: 171 CVRSTTNSIYQYQIETYQSEIAAWRLSGLPFVAPFDMVFDNGVFWNGAIHWI-------- 222

Query: 68  PGSTVSYGLYFNVDEGRLGTFP 3
             S     +YF++D   + + P
Sbjct: 223 --SATGNAIYFDMDRECISSMP 242


>ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score =  113 bits (282), Expect = 9e-23
 Identities = 85/239 (35%), Positives = 114/239 (47%), Gaps = 3/239 (1%)
 Frame = -1

Query: 710 RVPYRKLKSFKCVSKKWLYLITTPQFN-RLLCNLLPALRASGLFIQRPPIARFGQPCPNE 534
           R+P R L  FK VSK+WL LI+ P F+ R   +  P    SG+F        F +P P  
Sbjct: 29  RLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIF--------FPRPTPKS 80

Query: 533 VYFVSLDDPNTPS--PFKTLAFADDPFDPERIRILGSCNGLLLCSTCLLAFRETITNYVY 360
             F  ++    PS  PF++  FADD        IL SCNGL LCST    +  T   Y++
Sbjct: 81  PPFDFINFTTNPSRPPFESPHFADDKHG---FLILQSCNGLFLCSTYNGNY-STRDFYIH 136

Query: 359 NPSTNQLAILPKHPPANGVDYLSLAFDPSKSPHYKVIAYVTTSQSDSIGDFHVYSSETGT 180
           NP+TN    LP +     V  L+LAFDP +S  YKVI    +          +YSS TG 
Sbjct: 137 NPTTNHHTKLP-YLQVGAVFGLNLAFDPLRSSDYKVICVRYSDAYTDTFQIEMYSSVTGP 195

Query: 179 WRLSVQSFYLARHMYLNSGVYWHGCIYWLGDLNFEPVPGSTVSYGLYFNVDEGRLGTFP 3
           WR     F     M  +SGVYW+  ++W+          ST    LYF++ E ++   P
Sbjct: 196 WRPVQGVFSAPLSMRFDSGVYWNNAVHWI----------STSENSLYFDLREEKVHDLP 244


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score =  113 bits (282), Expect = 9e-23
 Identities = 87/238 (36%), Positives = 108/238 (45%), Gaps = 2/238 (0%)
 Frame = -1

Query: 710 RVPYRKLKSFKCVSKKWLYLITTPQFNRLLCNLLPALRASGLFIQRPPIARFGQPCPNEV 531
           R+P + L  FK VSK WL LIT P F+R   NL P           P  A F        
Sbjct: 30  RLPIKSLLKFKSVSKHWLSLITDPHFSRRK-NLKP----------NPVSALFS------- 71

Query: 530 YFVSLDDPNTPSPFKTLAFADDPFDPERIRILGSCNGLLLCSTCLLAFRETITNYVYNPS 351
            FV LD   T +PF +L F D P     I IL SCNGL  CS+      E    Y+YNP+
Sbjct: 72  -FVPLDPLQTSAPFTSLTFVDHP---RGIEILQSCNGLFCCSSVDYNDSER-KYYIYNPT 126

Query: 350 TNQLAILPK--HPPANGVDYLSLAFDPSKSPHYKVIAYVTTSQSDSIGDFHVYSSETGTW 177
           T Q   LP         V  ++LAFDPSKS  YKV+       S       + S ETG W
Sbjct: 127 TKQFTTLPPLCGRSVRRVLGVNLAFDPSKSHTYKVVCVQRCKSSYDHCQIQISSLETGPW 186

Query: 176 RLSVQSFYLARHMYLNSGVYWHGCIYWLGDLNFEPVPGSTVSYGLYFNVDEGRLGTFP 3
           R+S   F     +   SGVYW+G I+W+          S     LYF+++E  +   P
Sbjct: 187 RVSGVPFAAPISVDFPSGVYWNGAIHWI----------SPREASLYFDLNEELVREMP 234


>ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score =  111 bits (278), Expect = 3e-22
 Identities = 84/239 (35%), Positives = 114/239 (47%), Gaps = 3/239 (1%)
 Frame = -1

Query: 710 RVPYRKLKSFKCVSKKWLYLITTPQFN-RLLCNLLPALRASGLFIQRPPIARFGQPCPNE 534
           R+P R L  FK VSK+WL LI+ P F+ R   +  P    SG+F        F +P P  
Sbjct: 29  RLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIF--------FPRPTPKS 80

Query: 533 VYFVSLDDPNTPS--PFKTLAFADDPFDPERIRILGSCNGLLLCSTCLLAFRETITNYVY 360
             F  ++    PS  PF++  FADD        IL SCNGL LCST    +  T   Y++
Sbjct: 81  PPFDFINFTTNPSRPPFESPHFADDKHG---FLILQSCNGLFLCSTYNGNY-STRDFYIH 136

Query: 359 NPSTNQLAILPKHPPANGVDYLSLAFDPSKSPHYKVIAYVTTSQSDSIGDFHVYSSETGT 180
           NP+TN    LP +     V  L+LAFDP +S  YKVI    +          +YSS TG 
Sbjct: 137 NPTTNHHTKLP-YLQVGAVFGLNLAFDPLRSSDYKVICVRYSDAYTDTFQIEMYSSVTGP 195

Query: 179 WRLSVQSFYLARHMYLNSGVYWHGCIYWLGDLNFEPVPGSTVSYGLYFNVDEGRLGTFP 3
           WR     F     +  +SGVYW+  ++W+          ST    LYF++ E ++   P
Sbjct: 196 WRPVQGVFSAPLSVRFDSGVYWNNAVHWI----------STSENSLYFDLREEKVHDLP 244


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