BLASTX nr result

ID: Cnidium21_contig00026305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026305
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329979.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_003536014.1| PREDICTED: transmembrane protein 184B-like [...    97   1e-18
ref|XP_002269971.2| PREDICTED: transmembrane protein 184A-like [...    96   2e-18
ref|XP_003554591.1| PREDICTED: transmembrane protein 184A-like [...    96   2e-18
ref|XP_003521636.1| PREDICTED: transmembrane protein 184A-like [...    96   2e-18

>ref|XP_002329979.1| predicted protein [Populus trichocarpa]
           gi|224124264|ref|XP_002329980.1| predicted protein
           [Populus trichocarpa] gi|118487141|gb|ABK95399.1|
           unknown [Populus trichocarpa]
           gi|222871404|gb|EEF08535.1| predicted protein [Populus
           trichocarpa] gi|222871405|gb|EEF08536.1| predicted
           protein [Populus trichocarpa]
          Length = 420

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 42/50 (84%), Positives = 45/50 (90%)
 Frame = +3

Query: 264 YEAWVIYNFLSVCLDWVGGPGAVVLSLSGRVLNPSWWLMTCCFLPIPLDG 413
           YEAWVIYNFLS+CL WVGGPGAVVLSLSGR + PSW LMTCCF P+PLDG
Sbjct: 78  YEAWVIYNFLSLCLAWVGGPGAVVLSLSGRAMKPSWCLMTCCFPPVPLDG 127


>ref|XP_003536014.1| PREDICTED: transmembrane protein 184B-like [Glycine max]
          Length = 418

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/71 (63%), Positives = 53/71 (74%), Gaps = 4/71 (5%)
 Frame = +3

Query: 213 LSISNFFTHQDSHYLGG----YEAWVIYNFLSVCLDWVGGPGAVVLSLSGRVLNPSWWLM 380
           +S  + F  Q S Y       YEAWVIYNFLS+CL+WVGGPG+VVLSL+GRVL PSW+LM
Sbjct: 54  MSFLSLFLPQGSIYFNSIREIYEAWVIYNFLSLCLEWVGGPGSVVLSLTGRVLKPSWFLM 113

Query: 381 TCCFLPIPLDG 413
           TCC  P+ LDG
Sbjct: 114 TCCLPPLALDG 124


>ref|XP_002269971.2| PREDICTED: transmembrane protein 184A-like [Vitis vinifera]
          Length = 414

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/50 (84%), Positives = 45/50 (90%)
 Frame = +3

Query: 264 YEAWVIYNFLSVCLDWVGGPGAVVLSLSGRVLNPSWWLMTCCFLPIPLDG 413
           YEAWVIYNFLS+CL WVGGPGAVVLSLSGR L P+W LMTCCF P+PLDG
Sbjct: 71  YEAWVIYNFLSLCLAWVGGPGAVVLSLSGRNLKPAWCLMTCCFPPLPLDG 120


>ref|XP_003554591.1| PREDICTED: transmembrane protein 184A-like [Glycine max]
          Length = 419

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = +3

Query: 264 YEAWVIYNFLSVCLDWVGGPGAVVLSLSGRVLNPSWWLMTCCFLPIPLDG 413
           YEAWVIYNFLS+CL WVGGPGAVV+SLSGRVL PS+ LMTCCF PIPLDG
Sbjct: 78  YEAWVIYNFLSLCLAWVGGPGAVVISLSGRVLKPSFCLMTCCFPPIPLDG 127


>ref|XP_003521636.1| PREDICTED: transmembrane protein 184A-like [Glycine max]
          Length = 421

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = +3

Query: 264 YEAWVIYNFLSVCLDWVGGPGAVVLSLSGRVLNPSWWLMTCCFLPIPLDG 413
           YEAWVIYNFLS+CL WVGGPGAVV+SLSGRVL PS+ LMTCCF PIPLDG
Sbjct: 78  YEAWVIYNFLSLCLAWVGGPGAVVISLSGRVLKPSFCLMTCCFPPIPLDG 127


Top