BLASTX nr result

ID: Cnidium21_contig00026294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026294
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAO94661.1| ATP Binding Cassette Transporter (CrWBC1) [Catha...   200   1e-49
ref|XP_002306254.1| white-brown-complex ABC transporter family [...   199   2e-49
ref|XP_002516304.1| ATP-binding cassette transporter, putative [...   197   6e-49
ref|XP_002309921.1| white-brown-complex ABC transporter family [...   195   3e-48
ref|XP_002274622.1| PREDICTED: ABC transporter G family member 5...   194   8e-48

>emb|CAO94661.1| ATP Binding Cassette Transporter (CrWBC1) [Catharanthus roseus]
          Length = 626

 Score =  200 bits (508), Expect = 1e-49
 Identities = 103/141 (73%), Positives = 120/141 (85%), Gaps = 2/141 (1%)
 Frame = -2

Query: 418 QTLPKVAH-HHNATNPSFRHVLKDVTCRAKPWEILAIVGPSGAGKSSLLEILAGKLNPQS 242
           + +PKV +   ++T+ + RHVLK + CRAKPWEILAIVGPSGAGKSSLLEILAGKL PQS
Sbjct: 45  EQVPKVKNPKSSSTSSAVRHVLKGINCRAKPWEILAIVGPSGAGKSSLLEILAGKLTPQS 104

Query: 241 GSIFVNQKPVEKARFKKLSGYVTQKDILFPLLTVEETLMFSAKLRLSLPETELRSRVKSL 62
            SIFVNQKP EK +FKK+SGYVTQKD LFPLLTVEETLMFSAK RL LPE++L+ RVKSL
Sbjct: 105 ASIFVNQKPFEKTKFKKISGYVTQKDTLFPLLTVEETLMFSAKFRLRLPESQLKIRVKSL 164

Query: 61  IQELGLCHVAGSRVGD-NRIR 2
           ++ELGL HVA +RVGD  R+R
Sbjct: 165 MEELGLSHVANARVGDEERVR 185


>ref|XP_002306254.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222855703|gb|EEE93250.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 643

 Score =  199 bits (506), Expect = 2e-49
 Identities = 99/122 (81%), Positives = 112/122 (91%)
 Frame = -2

Query: 367 RHVLKDVTCRAKPWEILAIVGPSGAGKSSLLEILAGKLNPQSGSIFVNQKPVEKARFKKL 188
           +HVLKDV C+AKPWEILAIVGPSGAGKSSLLEILAGKL PQ+G+IFVNQ P++KARFKK+
Sbjct: 53  KHVLKDVFCKAKPWEILAIVGPSGAGKSSLLEILAGKLTPQNGTIFVNQNPIDKARFKKI 112

Query: 187 SGYVTQKDILFPLLTVEETLMFSAKLRLSLPETELRSRVKSLIQELGLCHVAGSRVGDNR 8
           SGYVTQKD LFPLLTVEETLMFSAKLRL LP+ +L S VKSL++ELGL HVA +RVGD+R
Sbjct: 113 SGYVTQKDTLFPLLTVEETLMFSAKLRLRLPQAQLSSNVKSLMKELGLDHVAMTRVGDDR 172

Query: 7   IR 2
           IR
Sbjct: 173 IR 174


>ref|XP_002516304.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223544534|gb|EEF46051.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 600

 Score =  197 bits (502), Expect = 6e-49
 Identities = 95/126 (75%), Positives = 113/126 (89%)
 Frame = -2

Query: 379 NPSFRHVLKDVTCRAKPWEILAIVGPSGAGKSSLLEILAGKLNPQSGSIFVNQKPVEKAR 200
           +P  +HVLK+V C+AKPWEILAIVGPSGAGKSSLLE+LAG+  PQ+GSIFVNQ P++KA+
Sbjct: 38  SPGIKHVLKEVNCKAKPWEILAIVGPSGAGKSSLLEVLAGRFAPQNGSIFVNQSPMDKAQ 97

Query: 199 FKKLSGYVTQKDILFPLLTVEETLMFSAKLRLSLPETELRSRVKSLIQELGLCHVAGSRV 20
           F K+SGYVTQ+D LFPLLTVEETLMFSAKLRL LP ++LRSRVKSL+ ELGL HVA +RV
Sbjct: 98  FNKISGYVTQRDTLFPLLTVEETLMFSAKLRLRLPHSQLRSRVKSLVHELGLDHVATTRV 157

Query: 19  GDNRIR 2
           GD+R+R
Sbjct: 158 GDDRVR 163


>ref|XP_002309921.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222852824|gb|EEE90371.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 546

 Score =  195 bits (496), Expect = 3e-48
 Identities = 98/122 (80%), Positives = 108/122 (88%)
 Frame = -2

Query: 367 RHVLKDVTCRAKPWEILAIVGPSGAGKSSLLEILAGKLNPQSGSIFVNQKPVEKARFKKL 188
           RHVLKDV C+AKPWEILAIVGPSGAGKSSLLE+LAGKL PQSGSIFVNQ P+ KA+FKK 
Sbjct: 1   RHVLKDVYCKAKPWEILAIVGPSGAGKSSLLEVLAGKLTPQSGSIFVNQNPINKAQFKKA 60

Query: 187 SGYVTQKDILFPLLTVEETLMFSAKLRLSLPETELRSRVKSLIQELGLCHVAGSRVGDNR 8
           SGYVTQKD LFPLLTVEETLMFSAKLRL LP+ +L S VK L+ ELGL HVA +RVGD+R
Sbjct: 61  SGYVTQKDTLFPLLTVEETLMFSAKLRLRLPQDQLSSEVKFLMHELGLDHVAMTRVGDDR 120

Query: 7   IR 2
           +R
Sbjct: 121 VR 122


>ref|XP_002274622.1| PREDICTED: ABC transporter G family member 5 isoform 1 [Vitis
           vinifera]
          Length = 635

 Score =  194 bits (492), Expect = 8e-48
 Identities = 98/126 (77%), Positives = 110/126 (87%)
 Frame = -2

Query: 379 NPSFRHVLKDVTCRAKPWEILAIVGPSGAGKSSLLEILAGKLNPQSGSIFVNQKPVEKAR 200
           +P  RHVLKDV C AKPWEILAIVGPSGAGKSSLLEILAGK+ PQ+ SI VNQKP++KA+
Sbjct: 42  SPGVRHVLKDVNCEAKPWEILAIVGPSGAGKSSLLEILAGKIAPQTASICVNQKPMDKAQ 101

Query: 199 FKKLSGYVTQKDILFPLLTVEETLMFSAKLRLSLPETELRSRVKSLIQELGLCHVAGSRV 20
           FKK+SG+V QKD LFPLLTVEETLMFSAKLRL LP  +L S+VKSLIQELGL HVAG RV
Sbjct: 102 FKKISGFVAQKDTLFPLLTVEETLMFSAKLRLRLPPAQLISKVKSLIQELGLEHVAGVRV 161

Query: 19  GDNRIR 2
           GD++ R
Sbjct: 162 GDDKAR 167


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