BLASTX nr result

ID: Cnidium21_contig00026290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026290
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19025.3| unnamed protein product [Vitis vinifera]              258   1e-66
ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein...   192   7e-47
ref|NP_001185421.1| sister chromatid cohesion protein PDS5 [Arab...   187   3e-45
ref|NP_001185420.1| sister chromatid cohesion protein PDS5 [Arab...   187   3e-45
ref|XP_002513802.1| androgen induced inhibitor of proliferation ...   187   4e-45

>emb|CBI19025.3| unnamed protein product [Vitis vinifera]
          Length = 1450

 Score =  258 bits (660), Expect = 1e-66
 Identities = 147/299 (49%), Positives = 190/299 (63%), Gaps = 3/299 (1%)
 Frame = -2

Query: 888  LKDSSMKXXXXXISNLPSLVRGXXXXXXXXXXXEDIPFNEELIQMIAKAGPYISYKLSDL 709
            L+ SS       +S  PSL++G           EDIPF E+LIQ++ KAGP+IS KLSD+
Sbjct: 627  LEVSSFDLLLVIVSIFPSLLKGSEKLFQMLLFKEDIPFQEKLIQVLGKAGPHISIKLSDI 686

Query: 708  YPSLERICLKGTRTQXXXXXXXXXXXXXXXXXXIFTKLCKKLVDALENGQNIPTVLQSLG 529
            YPSLE+ICL+G+R Q                  +F++LCK LVD+L  GQNIPTVLQSLG
Sbjct: 687  YPSLEKICLEGSRAQSKFAVSAIAALVGTSEQFVFSELCKALVDSLHGGQNIPTVLQSLG 746

Query: 528  CLAQYSAPTFESHVPDIGQYIIKKIFQVEISDELR-FEKTSDGTCTSRLKIFGLKALVKS 352
            C+AQ+S   FE+   +I  YI +  FQVE  D L  F++TS+ + + +LKI+ LKALV+S
Sbjct: 747  CMAQHSVSAFEARDKEITSYINETFFQVEPLDNLASFDETSECSSSCKLKIYALKALVRS 806

Query: 351  CLPHQRTHTSRHITKLLHEILQMLQKGDCSDLT--IETSKFMVNLAAAKSVLRLSRRWDL 178
             LPH+ TH  R I  LL  + +ML KGD S  T   E  +  + LAAAKSVLRL+ RWDL
Sbjct: 807  FLPHRGTHVKRQINDLLDIMSEMLPKGDISYDTGSCENDEAHIRLAAAKSVLRLAGRWDL 866

Query: 177  YISPSVFRLTVSMAKDPSSLIRRSFVDKTFKLLKEHRIPCRYXXXXXXXXXXSDEDMQK 1
            +ISP +FR T+ +AKDPS LIRR F+DKT KLLKEH IP RY            +D+Q+
Sbjct: 867  HISPHIFRSTILVAKDPSPLIRRLFLDKTHKLLKEHAIPSRYACAFAFAGPDCPKDLQE 925


>ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
            [Vitis vinifera]
          Length = 1305

 Score =  192 bits (489), Expect = 7e-47
 Identities = 115/254 (45%), Positives = 148/254 (58%), Gaps = 2/254 (0%)
 Frame = -2

Query: 888  LKDSSMKXXXXXISNLPSLVRGXXXXXXXXXXXEDIPFNEELIQMIAKAGPYISYKLSDL 709
            L+ SS       +S  PSL++G           EDIPF E+LIQ++ KAGP+IS KLSD+
Sbjct: 627  LEVSSFDLLLVIVSIFPSLLKGSEKLFQMLLFKEDIPFQEKLIQVLGKAGPHISIKLSDI 686

Query: 708  YPSLERICLKGTRTQXXXXXXXXXXXXXXXXXXIFTKLCKKLVDALENGQNIPTVLQSLG 529
            YPSLE+ICL+G+R Q                  +F++LCK LVD+L  GQNIPTVLQSLG
Sbjct: 687  YPSLEKICLEGSRAQSKFAVSAIAALVGTSEQFVFSELCKALVDSLHGGQNIPTVLQSLG 746

Query: 528  CLAQYSAPTFESHVPDIGQYIIKKIFQVEISDELRFEKTSDGTCTSRLKIFGLKALVKSC 349
            C+AQ+S   FE+   +I  YI +  FQ                      I+ LKALV+S 
Sbjct: 747  CMAQHSVSAFEARDKEITSYINETFFQ----------------------IYALKALVRSF 784

Query: 348  LPHQRTHTSRHITKLLHEILQMLQKGDCSDLT--IETSKFMVNLAAAKSVLRLSRRWDLY 175
            LPH+ TH  R I  LL  + +ML KGD S  T   E  +  + LAAAKSVLRL+ RWDL+
Sbjct: 785  LPHRGTHVKRQINDLLDIMSEMLPKGDISYDTGSCENDEAHIRLAAAKSVLRLAGRWDLH 844

Query: 174  ISPSVFRLTVSMAK 133
            ISP +FR T+ +AK
Sbjct: 845  ISPHIFRSTILVAK 858


>ref|NP_001185421.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
            gi|332197878|gb|AEE35999.1| sister chromatid cohesion
            protein PDS5 [Arabidopsis thaliana]
          Length = 1424

 Score =  187 bits (475), Expect = 3e-45
 Identities = 118/281 (41%), Positives = 163/281 (58%), Gaps = 2/281 (0%)
 Frame = -2

Query: 888  LKDSSMKXXXXXISNLPSLVRGXXXXXXXXXXXEDIPFNEELIQMIAKAGPYISYKLSDL 709
            LK  S+K     ++  PS +RG            D    +ELI +++KA PYIS    D 
Sbjct: 675  LKAPSIKLLLVILNMFPSYLRGSEKQFLKLLEENDSAA-DELIVVLSKAAPYISVNFGDY 733

Query: 708  YPSLERICLKGTRTQXXXXXXXXXXXXXXXXXXIFTKLCKKLVDALENGQNIPTVLQSLG 529
            YP LE++CL+GTR+Q                  +F++LC+ L+D+L  G+NIPT LQSL 
Sbjct: 734  YPVLEKVCLEGTRSQTKCAVSAISSLAGSSEKSVFSELCEMLMDSLLCGRNIPTTLQSLA 793

Query: 528  CLAQYSAPTFESHVPDIGQYIIKKIFQVEISDELRFEKTSDGTCTS-RLKIFGLKALVKS 352
            C+ QYS   +++   DI  YI + +FQ E SD       S G C S +LKI+GLK LVKS
Sbjct: 794  CVGQYSVLEYDNIYEDITSYIYR-VFQAEPSDNQLPCDQSSGCCNSCKLKIYGLKTLVKS 852

Query: 351  CLPHQRTHTSRHITKLLHEILQMLQ-KGDCSDLTIETSKFMVNLAAAKSVLRLSRRWDLY 175
             LP +     R I  LL+ + + L+ +G     + E +   V LAAAK+VL LSR+WDL+
Sbjct: 853  FLP-RHGQVVRKIDDLLNILKKTLKSQGHDGIKSCEDTGANVRLAAAKAVLLLSRKWDLH 911

Query: 174  ISPSVFRLTVSMAKDPSSLIRRSFVDKTFKLLKEHRIPCRY 52
            ISP VFRLT+ MAKD ++ I ++F+ K +KLL EH IP RY
Sbjct: 912  ISPEVFRLTILMAKDSNAFITKTFLTKLYKLLTEHMIPSRY 952


>ref|NP_001185420.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
            gi|332197877|gb|AEE35998.1| sister chromatid cohesion
            protein PDS5 [Arabidopsis thaliana]
          Length = 1410

 Score =  187 bits (475), Expect = 3e-45
 Identities = 118/281 (41%), Positives = 163/281 (58%), Gaps = 2/281 (0%)
 Frame = -2

Query: 888  LKDSSMKXXXXXISNLPSLVRGXXXXXXXXXXXEDIPFNEELIQMIAKAGPYISYKLSDL 709
            LK  S+K     ++  PS +RG            D    +ELI +++KA PYIS    D 
Sbjct: 661  LKAPSIKLLLVILNMFPSYLRGSEKQFLKLLEENDSAA-DELIVVLSKAAPYISVNFGDY 719

Query: 708  YPSLERICLKGTRTQXXXXXXXXXXXXXXXXXXIFTKLCKKLVDALENGQNIPTVLQSLG 529
            YP LE++CL+GTR+Q                  +F++LC+ L+D+L  G+NIPT LQSL 
Sbjct: 720  YPVLEKVCLEGTRSQTKCAVSAISSLAGSSEKSVFSELCEMLMDSLLCGRNIPTTLQSLA 779

Query: 528  CLAQYSAPTFESHVPDIGQYIIKKIFQVEISDELRFEKTSDGTCTS-RLKIFGLKALVKS 352
            C+ QYS   +++   DI  YI + +FQ E SD       S G C S +LKI+GLK LVKS
Sbjct: 780  CVGQYSVLEYDNIYEDITSYIYR-VFQAEPSDNQLPCDQSSGCCNSCKLKIYGLKTLVKS 838

Query: 351  CLPHQRTHTSRHITKLLHEILQMLQ-KGDCSDLTIETSKFMVNLAAAKSVLRLSRRWDLY 175
             LP +     R I  LL+ + + L+ +G     + E +   V LAAAK+VL LSR+WDL+
Sbjct: 839  FLP-RHGQVVRKIDDLLNILKKTLKSQGHDGIKSCEDTGANVRLAAAKAVLLLSRKWDLH 897

Query: 174  ISPSVFRLTVSMAKDPSSLIRRSFVDKTFKLLKEHRIPCRY 52
            ISP VFRLT+ MAKD ++ I ++F+ K +KLL EH IP RY
Sbjct: 898  ISPEVFRLTILMAKDSNAFITKTFLTKLYKLLTEHMIPSRY 938


>ref|XP_002513802.1| androgen induced inhibitor of proliferation (as3) / pds5, putative
            [Ricinus communis] gi|223546888|gb|EEF48385.1| androgen
            induced inhibitor of proliferation (as3) / pds5, putative
            [Ricinus communis]
          Length = 1332

 Score =  187 bits (474), Expect = 4e-45
 Identities = 114/254 (44%), Positives = 146/254 (57%), Gaps = 2/254 (0%)
 Frame = -2

Query: 888  LKDSSMKXXXXXISNLPSLVRGXXXXXXXXXXXEDIPFNEELIQMIAKAGPYISYKLSDL 709
            L+ SS       I+  PSL+RG           +++  N+ LI+ +AKAGPYIS K SD 
Sbjct: 639  LEASSANLLLTIINVFPSLLRGFEEQFRLLLQEKNM-INDVLIEALAKAGPYISVKFSDF 697

Query: 708  YPSLERICLKGTRTQXXXXXXXXXXXXXXXXXXIFTKLCKKLVDALENGQNIPTVLQSLG 529
            YP LE  CL+GTR Q                  IF+KLCK+LVD+L  G N PT+LQSLG
Sbjct: 698  YPLLESACLEGTRIQSKQAVSAIASLIGSSEQLIFSKLCKELVDSLHRGWNTPTILQSLG 757

Query: 528  CLAQYSAPTFESHVPDIGQYIIKKIFQVEISDELRFEKTSDGTCTSRLKIFGLKALVKSC 349
            C+AQ+S   FES   +I  YI ++IFQ                      I+G+K LVKS 
Sbjct: 758  CIAQHSVAAFESKYREIRSYIFQRIFQ----------------------IYGVKTLVKSF 795

Query: 348  LPHQRTHTSRHITKLLHEILQMLQKGDCSD--LTIETSKFMVNLAAAKSVLRLSRRWDLY 175
            LPHQ +H +R I +LL  +L++LQ GD  D  +T    K  V LAAAKSVLRLSRRWDL+
Sbjct: 796  LPHQGSHVNRQIDELLDILLKLLQTGDAIDGIITCVNDKPHVRLAAAKSVLRLSRRWDLH 855

Query: 174  ISPSVFRLTVSMAK 133
            ISP +FR T+ +AK
Sbjct: 856  ISPEIFRSTILVAK 869


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