BLASTX nr result

ID: Cnidium21_contig00026283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026283
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889240.1| EMB1135 [Arabidopsis lyrata subsp. lyrata] g...   222   2e-56
gb|AAC17076.1| Similar to D. melanogaster sno gene gb|U95760. ES...   221   6e-56
ref|NP_178053.4| RING/FYVE/PHD zinc finger domain-containing pro...   221   6e-56
dbj|BAF00787.1| hypothetical protein [Arabidopsis thaliana]           221   6e-56
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...   214   6e-54

>ref|XP_002889240.1| EMB1135 [Arabidopsis lyrata subsp. lyrata]
            gi|297335081|gb|EFH65499.1| EMB1135 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1299

 Score =  222 bits (566), Expect = 2e-56
 Identities = 109/132 (82%), Positives = 124/132 (93%)
 Frame = +1

Query: 1    EKTEEYLQNRRVYLARLLEWYEKAAERKSQILDAVRSLNLPNNPLDDIIDQLGGPDKVAE 180
            EKTEEY+Q RR+Y+A L + YE A ERK++I++ +RSLNLPNNPLDDI+DQLGGPDKVAE
Sbjct: 752  EKTEEYIQARRLYIAELQKRYEAALERKAKIIEIIRSLNLPNNPLDDIVDQLGGPDKVAE 811

Query: 181  ITGRRRMLVRSSDGKGVTYQARNTKDVTMEMVNMHEKQLFMDGKKLIAIISEAGSAGVSL 360
            ITGRR MLVR+S+GKGVTYQARNTKD+TMEMVNMHEKQLFMDGKKL+AIISEAGSAGVSL
Sbjct: 812  ITGRRGMLVRASNGKGVTYQARNTKDITMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSL 871

Query: 361  QADRRAVNQRRR 396
            QADRRAVNQ+RR
Sbjct: 872  QADRRAVNQKRR 883


>gb|AAC17076.1| Similar to D. melanogaster sno gene gb|U95760. EST gb|N97148 and
            gb|Z26221 come from this gene [Arabidopsis thaliana]
          Length = 1257

 Score =  221 bits (562), Expect = 6e-56
 Identities = 108/132 (81%), Positives = 124/132 (93%)
 Frame = +1

Query: 1    EKTEEYLQNRRVYLARLLEWYEKAAERKSQILDAVRSLNLPNNPLDDIIDQLGGPDKVAE 180
            EKTEEY+Q RR+Y+A L + YE A ERKS+I++ +RSLNLPNNPLDDI+DQLGGP+KVAE
Sbjct: 750  EKTEEYIQARRLYIAELQKRYEAALERKSKIIEIIRSLNLPNNPLDDIVDQLGGPEKVAE 809

Query: 181  ITGRRRMLVRSSDGKGVTYQARNTKDVTMEMVNMHEKQLFMDGKKLIAIISEAGSAGVSL 360
            +TGRR MLVR+S+GKGVTYQARNTKD+TMEMVNMHEKQLFMDGKKL+AIISEAGSAGVSL
Sbjct: 810  MTGRRGMLVRASNGKGVTYQARNTKDITMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSL 869

Query: 361  QADRRAVNQRRR 396
            QADRRAVNQ+RR
Sbjct: 870  QADRRAVNQKRR 881


>ref|NP_178053.4| RING/FYVE/PHD zinc finger domain-containing protein [Arabidopsis
            thaliana] gi|332198112|gb|AEE36233.1| RING/FYVE/PHD zinc
            finger domain-containing protein [Arabidopsis thaliana]
          Length = 1295

 Score =  221 bits (562), Expect = 6e-56
 Identities = 108/132 (81%), Positives = 124/132 (93%)
 Frame = +1

Query: 1    EKTEEYLQNRRVYLARLLEWYEKAAERKSQILDAVRSLNLPNNPLDDIIDQLGGPDKVAE 180
            EKTEEY+Q RR+Y+A L + YE A ERKS+I++ +RSLNLPNNPLDDI+DQLGGP+KVAE
Sbjct: 740  EKTEEYIQARRLYIAELQKRYEAALERKSKIIEIIRSLNLPNNPLDDIVDQLGGPEKVAE 799

Query: 181  ITGRRRMLVRSSDGKGVTYQARNTKDVTMEMVNMHEKQLFMDGKKLIAIISEAGSAGVSL 360
            +TGRR MLVR+S+GKGVTYQARNTKD+TMEMVNMHEKQLFMDGKKL+AIISEAGSAGVSL
Sbjct: 800  MTGRRGMLVRASNGKGVTYQARNTKDITMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSL 859

Query: 361  QADRRAVNQRRR 396
            QADRRAVNQ+RR
Sbjct: 860  QADRRAVNQKRR 871


>dbj|BAF00787.1| hypothetical protein [Arabidopsis thaliana]
          Length = 624

 Score =  221 bits (562), Expect = 6e-56
 Identities = 108/132 (81%), Positives = 124/132 (93%)
 Frame = +1

Query: 1   EKTEEYLQNRRVYLARLLEWYEKAAERKSQILDAVRSLNLPNNPLDDIIDQLGGPDKVAE 180
           EKTEEY+Q RR+Y+A L + YE A ERKS+I++ +RSLNLPNNPLDDI+DQLGGP+KVAE
Sbjct: 69  EKTEEYIQARRLYIAELQKRYEAALERKSKIIEIIRSLNLPNNPLDDIVDQLGGPEKVAE 128

Query: 181 ITGRRRMLVRSSDGKGVTYQARNTKDVTMEMVNMHEKQLFMDGKKLIAIISEAGSAGVSL 360
           +TGRR MLVR+S+GKGVTYQARNTKD+TMEMVNMHEKQLFMDGKKL+AIISEAGSAGVSL
Sbjct: 129 MTGRRGMLVRASNGKGVTYQARNTKDITMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSL 188

Query: 361 QADRRAVNQRRR 396
           QADRRAVNQ+RR
Sbjct: 189 QADRRAVNQKRR 200


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score =  214 bits (545), Expect = 6e-54
 Identities = 105/132 (79%), Positives = 121/132 (91%)
 Frame = +1

Query: 1    EKTEEYLQNRRVYLARLLEWYEKAAERKSQILDAVRSLNLPNNPLDDIIDQLGGPDKVAE 180
            EKT+EYLQ R+ Y+A L + Y+ A+ERK++ILD +R+L+LPNNPLDDI+DQLGGPDKVAE
Sbjct: 3867 EKTDEYLQARQAYIAELQKRYDAASERKTKILDIIRALDLPNNPLDDIVDQLGGPDKVAE 3926

Query: 181  ITGRRRMLVRSSDGKGVTYQARNTKDVTMEMVNMHEKQLFMDGKKLIAIISEAGSAGVSL 360
            +TGRR MLVR+S GKGVTYQARNTKDVTMEMVNMHEKQLFMDGKK +AIISEAGSAGVSL
Sbjct: 3927 MTGRRGMLVRASTGKGVTYQARNTKDVTMEMVNMHEKQLFMDGKKFVAIISEAGSAGVSL 3986

Query: 361  QADRRAVNQRRR 396
            QADRRA NQ+RR
Sbjct: 3987 QADRRAANQKRR 3998


Top