BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026275
         (1251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889740.1| hypothetical protein ARALYDRAFT_888168 [Arab...    89   2e-15
ref|NP_001031011.1| importin alpha isoform 4 [Arabidopsis thalia...    89   3e-15
ref|NP_172398.1| importin alpha isoform 4 [Arabidopsis thaliana]...    89   3e-15
emb|CAA74966.1| Importin alpha-like protein [Arabidopsis thaliana]     86   2e-14
ref|XP_002868159.1| AT3g06720/F3E22_14 [Arabidopsis lyrata subsp...    85   4e-14

>ref|XP_002889740.1| hypothetical protein ARALYDRAFT_888168 [Arabidopsis lyrata subsp.
            lyrata] gi|297335582|gb|EFH65999.1| hypothetical protein
            ARALYDRAFT_888168 [Arabidopsis lyrata subsp. lyrata]
          Length = 538

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 81/269 (30%), Positives = 132/269 (49%), Gaps = 5/269 (1%)
 Frame = +3

Query: 459  QTDPRVGKFLDNDFLKLIVEFLGNEQNPRLQFHAATIIRHFIAYSTN--KQVVKQSITPS 632
            +  P + + +    +   VEFLG + +P+LQF AA  + +  + +++  + V++Q   P 
Sbjct: 109  ERSPPIDEVIKAGVVPRFVEFLGRQDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVP- 167

Query: 633  IILNLLSSKDCDLQLQAIQLLRAMALGIPDDPEI-NFILE-KALDPVISFISSLLADDSP 806
            I + LLSS   D++ QA+  L  +A    D P   N +L   AL+P+++ +     +++ 
Sbjct: 168  IFVQLLSSASDDVREQAVWALGNVA---GDSPNCRNLVLNYGALEPLLAQL-----NENS 219

Query: 807  KLKILHIGIVTLATVCQVYPMLPEEKLETVLLALRNLILYQGEEYFTEVFLPSVCSALAY 986
            KL +L     TL+  C+  P  P E+++  L  LR LI    EE  T+      C AL+Y
Sbjct: 220  KLSMLRNATWTLSNFCRGKPPTPFEQVKPALPVLRQLIYLNDEEVLTD-----ACWALSY 274

Query: 987  LCDGRGAMVVKDNFFGEIIDRLIVLIDSDSIINCNAGLIALGRIVRWASDYHIQVIIEKG 1166
            L DG    +      G +  RL+ L+   S       L  +G IV    D   Q II+ G
Sbjct: 275  LSDGPNNKIQAVIQAG-VCPRLVELLGHQSPTVLIPALRTVGNIVT-GDDSQTQFIIDSG 332

Query: 1167 VLWSVEWMIRQDQRHCV-MYACWIISNIT 1250
            VL  +  ++ Q+ +  +   ACW ISNIT
Sbjct: 333  VLPHLYNLLTQNHKKSIKKEACWTISNIT 361


>ref|NP_001031011.1| importin alpha isoform 4 [Arabidopsis thaliana]
            gi|332190302|gb|AEE28423.1| importin alpha isoform 4
            [Arabidopsis thaliana]
          Length = 456

 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 5/269 (1%)
 Frame = +3

Query: 459  QTDPRVGKFLDNDFLKLIVEFLGNEQNPRLQFHAATIIRHFIAYSTN--KQVVKQSITPS 632
            +  P + + +    +   VEFLG   +P+LQF AA  + +  + +++  + V++Q   P 
Sbjct: 28   ERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVP- 86

Query: 633  IILNLLSSKDCDLQLQAIQLLRAMALGIPDDPEI-NFILE-KALDPVISFISSLLADDSP 806
            I + LL+S   D++ QA+  L  +A    D P   N +L   AL+P+++ +     +++ 
Sbjct: 87   IFVKLLTSASDDVREQAVWALGNVA---GDSPNCRNLVLNYGALEPLLAQL-----NENS 138

Query: 807  KLKILHIGIVTLATVCQVYPMLPEEKLETVLLALRNLILYQGEEYFTEVFLPSVCSALAY 986
            KL +L     TL+  C+  P  P E+++  L  LR LI    EE  T+      C AL+Y
Sbjct: 139  KLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYLNDEEVLTD-----ACWALSY 193

Query: 987  LCDGRGAMVVKDNFFGEIIDRLIVLIDSDSIINCNAGLIALGRIVRWASDYHIQVIIEKG 1166
            L DG    +      G +  RL+ L+   S       L  +G IV    D   Q IIE G
Sbjct: 194  LSDGPNDKIQAVIEAG-VCPRLVELLGHQSPTVLIPALRTVGNIVT-GDDSQTQFIIESG 251

Query: 1167 VLWSVEWMIRQDQRHCV-MYACWIISNIT 1250
            VL  +  ++ Q+ +  +   ACW ISNIT
Sbjct: 252  VLPHLYNLLTQNHKKSIKKEACWTISNIT 280


>ref|NP_172398.1| importin alpha isoform 4 [Arabidopsis thaliana]
            gi|30681049|ref|NP_849623.1| importin alpha isoform 4
            [Arabidopsis thaliana] gi|3249096|gb|AAC24079.1| Match to
            mRNA for importin alpha-like protein 4 (impa4) gb|Y14616
            from A. thaliana. ESTs gb|N96440, gb|N37503, gb|N37498
            and gb|T42198 come from this gene [Arabidopsis thaliana]
            gi|20259334|gb|AAM13992.1| putative importin alpha
            protein [Arabidopsis thaliana] gi|21436201|gb|AAM51388.1|
            putative importin alpha protein [Arabidopsis thaliana]
            gi|222422859|dbj|BAH19416.1| AT1G09270 [Arabidopsis
            thaliana] gi|332190300|gb|AEE28421.1| importin alpha
            isoform 4 [Arabidopsis thaliana]
            gi|332190301|gb|AEE28422.1| importin alpha isoform 4
            [Arabidopsis thaliana]
          Length = 538

 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 5/269 (1%)
 Frame = +3

Query: 459  QTDPRVGKFLDNDFLKLIVEFLGNEQNPRLQFHAATIIRHFIAYSTN--KQVVKQSITPS 632
            +  P + + +    +   VEFLG   +P+LQF AA  + +  + +++  + V++Q   P 
Sbjct: 110  ERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVP- 168

Query: 633  IILNLLSSKDCDLQLQAIQLLRAMALGIPDDPEI-NFILE-KALDPVISFISSLLADDSP 806
            I + LL+S   D++ QA+  L  +A    D P   N +L   AL+P+++ +     +++ 
Sbjct: 169  IFVKLLTSASDDVREQAVWALGNVA---GDSPNCRNLVLNYGALEPLLAQL-----NENS 220

Query: 807  KLKILHIGIVTLATVCQVYPMLPEEKLETVLLALRNLILYQGEEYFTEVFLPSVCSALAY 986
            KL +L     TL+  C+  P  P E+++  L  LR LI    EE  T+      C AL+Y
Sbjct: 221  KLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYLNDEEVLTD-----ACWALSY 275

Query: 987  LCDGRGAMVVKDNFFGEIIDRLIVLIDSDSIINCNAGLIALGRIVRWASDYHIQVIIEKG 1166
            L DG    +      G +  RL+ L+   S       L  +G IV    D   Q IIE G
Sbjct: 276  LSDGPNDKIQAVIEAG-VCPRLVELLGHQSPTVLIPALRTVGNIVT-GDDSQTQFIIESG 333

Query: 1167 VLWSVEWMIRQDQRHCV-MYACWIISNIT 1250
            VL  +  ++ Q+ +  +   ACW ISNIT
Sbjct: 334  VLPHLYNLLTQNHKKSIKKEACWTISNIT 362


>emb|CAA74966.1| Importin alpha-like protein [Arabidopsis thaliana]
          Length = 528

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 4/268 (1%)
 Frame = +3

Query: 459  QTDPRVGKFLDNDFLKLIVEFLGNEQNPRLQFHAATIIRHFIAYSTN--KQVVKQSITPS 632
            +  P + + +    +   VEFLG   +P+LQF AA  + +  + +++  + V++Q   P 
Sbjct: 101  ERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVP- 159

Query: 633  IILNLLSSKDCDLQLQAIQLLRAMALGIPDDPEI-NFILE-KALDPVISFISSLLADDSP 806
            I + LL+S   D++ QA+  L  +A    D P   N +L   AL+P+++ +     +++ 
Sbjct: 160  IFVKLLTSASDDVREQAVWALGNVA---GDSPNCRNLVLNYGALEPLLAQL-----NENS 211

Query: 807  KLKILHIGIVTLATVCQVYPMLPEEKLETVLLALRNLILYQGEEYFTEVFLPSVCSALAY 986
            KL +L     TL+  C+  P  P E+++  L  LR LI    EE  T+      C AL+Y
Sbjct: 212  KLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYLNDEEVLTD-----ACWALSY 266

Query: 987  LCDGRGAMVVKDNFFGEIIDRLIVLIDSDSIINCNAGLIALGRIVRWASDYHIQVIIEKG 1166
            L DG    +      G +  RL+ L+   S       L  +G IV    D   Q IIE G
Sbjct: 267  LSDGPNDKIQAVIEAG-VCPRLVELLGHQSPTVLIPALRTVGNIVT-GDDSQTQFIIESG 324

Query: 1167 VLWSVEWMIRQDQRHCVMYACWIISNIT 1250
            VL  +       ++     ACW ISNIT
Sbjct: 325  VLPHLYNCDANHKKSIKKEACWTISNIT 352


>ref|XP_002868159.1| AT3g06720/F3E22_14 [Arabidopsis lyrata subsp. lyrata]
            gi|297313995|gb|EFH44418.1| AT3g06720/F3E22_14
            [Arabidopsis lyrata subsp. lyrata]
          Length = 583

 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 4/268 (1%)
 Frame = +3

Query: 459  QTDPRVGKFLDNDFLKLIVEFLGNEQNPRLQFHAATIIRHFIA-YSTNKQVVKQSITPSI 635
            +  P + + +D   +   VEFL  E  P+LQF AA  + +  +  S N +VV +     I
Sbjct: 108  ERSPPIEEVIDAGVVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPI 167

Query: 636  ILNLLSSKDCDLQLQAIQLLRAMALGIPDDPEINFIL--EKALDPVISFISSLLADDSPK 809
             + LL+S+  D++ QA+  L  +A    D P    ++  + AL P++S +     ++  K
Sbjct: 168  FVQLLASQSDDVREQAVWALGNVA---GDSPRCRDLVLGQGALIPLLSQL-----NEHAK 219

Query: 810  LKILHIGIVTLATVCQVYPMLPEEKLETVLLALRNLILYQGEEYFTEVFLPSVCSALAYL 989
            L +L     TL+  C+  P  P +++   L AL  LI    EE  T+      C AL+YL
Sbjct: 220  LSMLRNATWTLSNFCRGKPQPPFDQVRPALPALERLIHSTDEEVLTD-----ACWALSYL 274

Query: 990  CDGRGAMVVKDNFFGEIIDRLIVLIDSDSIINCNAGLIALGRIVRWASDYHIQVIIEKGV 1169
             DG     ++      ++ RL+ L+   S       L ++G IV    D   Q +I  G 
Sbjct: 275  SDGTNDK-IQSVIEAGVVPRLVELLQHQSPSVLIPALRSIGNIVT-GDDLQTQCVISHGA 332

Query: 1170 LWSVEWMIRQDQRHCV-MYACWIISNIT 1250
            L S+  ++  + +  +   ACW ISNIT
Sbjct: 333  LLSLLSLLTHNHKKSIKKEACWTISNIT 360