BLASTX nr result

ID: Cnidium21_contig00026260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026260
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW84490.1| hypothetical protein ZEAMMB73_428483, partial [Ze...    40   6e-06

>gb|AFW84490.1| hypothetical protein ZEAMMB73_428483, partial [Zea mays]
          Length = 578

 Score = 40.4 bits (93), Expect(2) = 6e-06
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -1

Query: 220 YTHSHIHKH-HSYSPRPAYLYTQPHTHIHN*THPRLLQ*THTH 95
           +TH+H H H H+++    + +T  HTH H  TH      THTH
Sbjct: 182 HTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTH 224



 Score = 40.4 bits (93), Expect(2) = 6e-06
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -1

Query: 220 YTHSHIHKH-HSYSPRPAYLYTQPHTHIHN*THPRLLQ*THTH 95
           +TH+H H H H+++    + +T  HTH H  TH      THTH
Sbjct: 184 HTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTH 226



 Score = 35.0 bits (79), Expect(2) = 6e-06
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -3

Query: 431 TSPHTAPDTHNFKHTHALHLNTQQQQSV*SRIETPTHTSVSIYLDCHMH 285
           T  HT   TH   HTH  H +T       +   T THT    +   H H
Sbjct: 136 THTHTHTHTHTHTHTHTHHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTH 184



 Score = 35.0 bits (79), Expect(2) = 6e-06
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -3

Query: 431 TSPHTAPDTHNFKHTHALHLNTQQQQSV*SRIETPTHTSVSIYLDCHMH 285
           T  HT   TH   HTH  H +T       +   T THT    +   H H
Sbjct: 138 THTHTHTHTHTHTHTHHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTH 186


Top