BLASTX nr result

ID: Cnidium21_contig00026228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026228
         (1603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS79601.1| putative endonuclease III protein [Ipomoea trifid...    81   7e-13
emb|CBI40219.3| unnamed protein product [Vitis vinifera]               70   2e-09
ref|XP_002267310.1| PREDICTED: transcriptional activator DEMETER...    70   2e-09
ref|XP_002270885.2| PREDICTED: DEMETER-like protein 3-like [Viti...    70   2e-09
gb|AEC12445.1| DNA N-glycosylase/DNA-(apurinic or apyrimidinic s...    64   9e-08

>gb|AAS79601.1| putative endonuclease III protein [Ipomoea trifida]
            gi|118562896|dbj|BAF37786.1| hypothetical protein
            [Ipomoea trifida]
          Length = 1687

 Score = 81.3 bits (199), Expect = 7e-13
 Identities = 104/399 (26%), Positives = 162/399 (40%), Gaps = 19/399 (4%)
 Frame = +3

Query: 222  PSPAEKQDSRKRHNDGIDLNNKPKQRPKVK--KHRPKIAVDRWTPRKNPKAQTTKKSTPK 395
            P+P EK+   ++         K  ++PKVK  KHRPKI  D   P+K PK+   +++  +
Sbjct: 108  PTPMEKEQISRK------TKVKTPRQPKVKRKKHRPKI-FDESKPKKVPKSTPKRENGKR 160

Query: 396  NYKPSTPKNVNLRGKRYSGKLSDSKGLTST----LENVKGEANFETSTCVAVSCKRSLNF 563
             Y   +           SG ++D+     T    +E  K +   + S     SCKR +NF
Sbjct: 161  KYARRSSTGQPPGSAMRSGMVADTSLNPETPGPLVEGRKRKCTLKASKHPLKSCKRGINF 220

Query: 564  ECKAVEKCDDVVESCNRTHQYWHHLQSVEGFPLQLSTELSMCSDFKTESKESGENCSNRF 743
            +    +  D  VE+ N T +     + +  F    S E +  S    + K   EN +   
Sbjct: 221  DPSVEDDTD--VETVNNTAE-----EKINKFG-DCSIEFNANSSQYVDHKALEENKTANI 272

Query: 744  LYHYQRRMRGVDTSLLKANTGTKIGTE----ECTNSAFNTDVNQL--IFDAPHELKKQSV 905
                        TS++ A+T + I  E    E   +  N  V  L  +  +P+   K+S+
Sbjct: 273  YA----------TSIISADTTSIISAENNLYEKRLTVGNNSVESLKPVQSSPNHGCKESM 322

Query: 906  FHQNNLHGNSKAGCLQFYRRT-------FRVNQCRQNSRKSGPNFPKICKKSRTTRRKQT 1064
               N  H + +   LQ Y+RT       FR N+  +NSRK GPN P   KK R+ RR+  
Sbjct: 323  DVLN--HNSGQTNTLQVYQRTLLVYHRKFRANEIIKNSRKLGPNCPTFAKKKRSKRRRAN 380

Query: 1065 MFLTIWSVVEGARGGAKSEGTRGRCKQITRNFCAQINWKIVRKGVRSLRKSKYPRPLSVC 1244
             +   W + EG                           ++V     +LR  K        
Sbjct: 381  KY-NFWLLEEGRE-------------------------QMVIAPKYALRSKKK------- 407

Query: 1245 RDFQIVKPLLKMIMPSEEQNQAAIADPESFKCVVGLSPV 1361
             D  +   +L  +  S  Q +AAIADP+SF C+  L P+
Sbjct: 408  HDLDVNNSILPGLPKS--QIKAAIADPKSFICLYSLFPL 444


>emb|CBI40219.3| unnamed protein product [Vitis vinifera]
          Length = 1621

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 51/138 (36%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
 Frame = +3

Query: 174 CAEKLPRNIDSPSVSTPSPAE-KQDSRKRHNDGIDLNNKPKQR-PKVKKHRPKIAVDRWT 347
           C E L   + S S + PSP + K    K  ++GIDLN  PKQ+ PK +KHRPK+ ++   
Sbjct: 219 CDELLHNIVASSSAAPPSPCKGKNIVAKEGDEGIDLNKTPKQKQPKKRKHRPKVVIE-GK 277

Query: 348 PRKNPKAQTTKKSTPKNY-KPSTPKNVNLR----GKR-YSGKLSDSKGLTSTLENVKGEA 509
           P+K PK +   +  PK   KP  P N N +    GKR Y  K +    +T   +  K   
Sbjct: 278 PKKTPKPKVVIEGKPKKTPKPKVPSNSNPKENPTGKRKYVRKNNPKVPVTDPTDVRKEIL 337

Query: 510 NFETSTCVAVSCKRSLNF 563
           +   ++  A SCKR LNF
Sbjct: 338 DPSFASATAKSCKRVLNF 355


>ref|XP_002267310.1| PREDICTED: transcriptional activator DEMETER-like [Vitis vinifera]
          Length = 2198

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 51/138 (36%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
 Frame = +3

Query: 174 CAEKLPRNIDSPSVSTPSPAE-KQDSRKRHNDGIDLNNKPKQR-PKVKKHRPKIAVDRWT 347
           C E L   + S S + PSP + K    K  ++GIDLN  PKQ+ PK +KHRPK+ ++   
Sbjct: 544 CDELLHNIVASSSAAPPSPCKGKNIVAKEGDEGIDLNKTPKQKQPKKRKHRPKVVIE-GK 602

Query: 348 PRKNPKAQTTKKSTPKNY-KPSTPKNVNLR----GKR-YSGKLSDSKGLTSTLENVKGEA 509
           P+K PK +   +  PK   KP  P N N +    GKR Y  K +    +T   +  K   
Sbjct: 603 PKKTPKPKVVIEGKPKKTPKPKVPSNSNPKENPTGKRKYVRKNNPKVPVTDPTDVRKEIL 662

Query: 510 NFETSTCVAVSCKRSLNF 563
           +   ++  A SCKR LNF
Sbjct: 663 DPSFASATAKSCKRVLNF 680


>ref|XP_002270885.2| PREDICTED: DEMETER-like protein 3-like [Vitis vinifera]
          Length = 1372

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 10/215 (4%)
 Frame = +3

Query: 123 TEKEEQRVGEFEEI---NFYCAEKLPRNIDSPSVSTPSPAEKQDSRKRHNDG----IDLN 281
           T + +Q  G  + +   N   AE +P      + +T   A   +S   H  G    IDLN
Sbjct: 226 TAESKQNAGSIDGVACPNIGLAESIPLQ----NTATVGIASSVESILTHEKGSKKKIDLN 281

Query: 282 NKPKQ-RPKVKKHRPKIAV-DRWTPRKNPKAQT-TKKSTPKNYKPSTPKNVNLRGKRYSG 452
            KP+Q +PK KKHRPK+ V D    +K PK+++  +K TPK  KP TPK V L+ KR   
Sbjct: 282 KKPRQQKPKKKKHRPKVVVDDDGKKKKIPKSKSKARKVTPKTPKPLTPKPVILKRKRKEK 341

Query: 453 KLSDSKGLTSTLENVKGEANFETSTCVAVSCKRSLNFECKAVEKCDDVVESCNRTHQYWH 632
           K           + +  EA  E  T    SCK+ LNFE + +   +++    ++      
Sbjct: 342 K-----------KPLGSEAPEEPPT---KSCKKGLNFELENL-LTEEIYAQRDQNSYKNE 386

Query: 633 HLQSVEGFPLQLSTELSMCSDFKTESKESGENCSN 737
            ++   G   +++   +   D K+   + GE CS+
Sbjct: 387 VIKRENGITGEMNMVDNEMRDLKSRVDQEGEGCSD 421


>gb|AEC12445.1| DNA N-glycosylase/DNA-(apurinic or apyrimidinic site) lyase
            [Gossypium hirsutum]
          Length = 2055

 Score = 64.3 bits (155), Expect = 9e-08
 Identities = 88/372 (23%), Positives = 147/372 (39%), Gaps = 90/372 (24%)
 Frame = +3

Query: 69   PAEKQETGTRH-TDDESKCTEKEEQRV-----GEFEEINFYCAEKLPRNIDSPSVSTPSP 230
            P + Q+T  ++   DE+  +EKE++ +      EF + N    + L   +DS SV   +P
Sbjct: 329  PDQTQKTRKQNPAADENSVSEKEQESLIVCNKKEFSQQN---CDLLQNIVDSSSVIISAP 385

Query: 231  AEKQDSRKRHNDGIDLNNKPKQR-PKVKKHRPKIAVDRWTPRKNPKAQTTKKSTPKNYKP 407
             E++DS +    GIDLN  P+Q+ PK +KHRPK+ V+   P++ PK  TT     K+   
Sbjct: 386  MEEKDSERGSVQGIDLNKTPQQKPPKRRKHRPKVIVE-GKPKRTPKPTTTANVNSKDNPS 444

Query: 408  STPKNVNLRGKRYSG-------KLSDS-------------KGLTSTL------------- 488
               K V  +G            K SDS             KGLT                
Sbjct: 445  GKRKYVRRKGLTEPATQHADPTKASDSTAGTPAKRKYVRKKGLTELATQHAEVLQTNLLV 504

Query: 489  ---ENVKGEANFETS-------------------TCVAVSCKRSLNFECKAVEKCDDVVE 602
                 ++G+   ET+                    C   SC+R+LNF+   +E   +   
Sbjct: 505  MLGSTIRGKCMHETNQKESASPQGDCIRDSDPSPVCAPRSCRRALNFD---LENTGNGSL 561

Query: 603  SCNRTHQYWHHLQSVE------------GFPLQLSTELSMCSDFKTESKESGENCSNRFL 746
            +    HQ     +S E            GF  + +T+ +  S    E+ +    CS+   
Sbjct: 562  AGTLNHQEMLSSKSSESRSMGFSSVGNSGFKTRFTTQSNQQSGLAVENPQLQAECSHS-- 619

Query: 747  YHYQRRMRGVDTSLL---KANTGTKIGTEECTNSA---------FNTDVNQLIF----DA 878
              + ++M  +D   L    A T +++  +E   +          ++ D+NQ  +      
Sbjct: 620  -PFMKKMMPIDYMSLPGITAATASRLQAKELMENVNVMARNANMYDIDLNQNSYRNVGTL 678

Query: 879  PHELKKQSVFHQ 914
            PH  K  ++FH+
Sbjct: 679  PHS-KLSNLFHK 689


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