BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026208
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529632.1| PREDICTED: tRNA wybutosine-synthesizing prot...   119   3e-25
ref|XP_004155603.1| PREDICTED: tRNA wybutosine-synthesizing prot...   112   3e-23
ref|XP_004134760.1| PREDICTED: LOW QUALITY PROTEIN: tRNA wybutos...   112   3e-23
gb|AAD48952.1|AF149414_1 contains similarity to Pfam family PF00...   110   9e-23
ref|XP_002872703.1| hypothetical protein ARALYDRAFT_490107 [Arab...   110   9e-23

>ref|XP_003529632.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Glycine
           max]
          Length = 1068

 Score =  119 bits (297), Expect = 3e-25
 Identities = 69/148 (46%), Positives = 85/148 (57%), Gaps = 5/148 (3%)
 Frame = +2

Query: 44  KTMDFDKRKASTLSLINTPPQNYSDKSPKGXXXXXXXXXXXXXNXXXXXXXXXXXXGRIS 223
           K M+F+KRKA+TL+ +++     SDKSPKG             N            GRIS
Sbjct: 22  KRMEFEKRKAATLASLSSTE---SDKSPKGSLDAAIVPLLNTLNQNPSYFTTSSCSGRIS 78

Query: 224 ILXXXXXXXXX---NKKAKGGKWVLISHDPVDPTSVLDLLYNPSSVVDESC--ELVFRFE 388
           IL             KKA+GG W+ +SHDP DP SVL LL+   S        ELVFRFE
Sbjct: 79  ILAQPLSLSDSPNPKKKARGGTWLFVSHDPADPDSVLSLLFPSESTPSPFAPSELVFRFE 138

Query: 389 PLIVAVECRDVGSAHKLVSVAVSCGFRE 472
           PLI+A+ECRD+ SAH LVS+A+SCGFRE
Sbjct: 139 PLIIALECRDLSSAHSLVSLAISCGFRE 166


>ref|XP_004155603.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Cucumis
           sativus]
          Length = 1035

 Score =  112 bits (280), Expect = 3e-23
 Identities = 64/146 (43%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
 Frame = +2

Query: 50  MDFDKRKASTLSLINTPPQNYSDKSPKGXXXXXXXXXXXXXNXXXXXXXXXXXXGRISIL 229
           M+F+KRKA+T++ + +     +DKSPKG             N            GRISIL
Sbjct: 1   MEFEKRKAATMASLGSTE---TDKSPKGSLDTPIIPLINTLNSHPSYFTTSSCSGRISIL 57

Query: 230 XXXXXXXXX-----NKKAKGGKWVLISHDPVDPTSVLDLLYNPSSVVDESCELVFRFEPL 394
                          KKA GG W+ +SH+  +P SV+DLL+   S   E  ELVFRFEPL
Sbjct: 58  AQPISTTSAAAPKPKKKALGGSWLFVSHEFAEPNSVIDLLFRSPSTNRELSELVFRFEPL 117

Query: 395 IVAVECRDVGSAHKLVSVAVSCGFRE 472
           I+AVEC+D+GSA  LVS A+SCGFRE
Sbjct: 118 IIAVECKDLGSAQALVSTAISCGFRE 143


>ref|XP_004134760.1| PREDICTED: LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing
           protein 2/3/4-like [Cucumis sativus]
          Length = 1034

 Score =  112 bits (280), Expect = 3e-23
 Identities = 64/146 (43%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
 Frame = +2

Query: 50  MDFDKRKASTLSLINTPPQNYSDKSPKGXXXXXXXXXXXXXNXXXXXXXXXXXXGRISIL 229
           M+F+KRKA+T++ + +     +DKSPKG             N            GRISIL
Sbjct: 1   MEFEKRKAATMASLGSTE---TDKSPKGSLDTPIIPLINTLNSHPSYFTTSSCSGRISIL 57

Query: 230 XXXXXXXXX-----NKKAKGGKWVLISHDPVDPTSVLDLLYNPSSVVDESCELVFRFEPL 394
                          KKA GG W+ +SH+  +P SV+DLL+   S   E  ELVFRFEPL
Sbjct: 58  AQPISTTSAAAPKPKKKALGGSWLFVSHEFAEPNSVIDLLFRSPSTNRELSELVFRFEPL 117

Query: 395 IVAVECRDVGSAHKLVSVAVSCGFRE 472
           I+AVEC+D+GSA  LVS A+SCGFRE
Sbjct: 118 IIAVECKDLGSAQALVSTAISCGFRE 143


>gb|AAD48952.1|AF149414_1 contains similarity to Pfam family PF00145 (C-5 cytosine-specific
           DNA methylase); score=10.4. E=0.051, N=1 [Arabidopsis
           thaliana] gi|7267225|emb|CAB80832.1| AT4g04670
           [Arabidopsis thaliana]
          Length = 977

 Score =  110 bits (276), Expect = 9e-23
 Identities = 65/147 (44%), Positives = 85/147 (57%), Gaps = 6/147 (4%)
 Frame = +2

Query: 50  MDFDKRKASTLSLINTPPQNYSDKSPKGXXXXXXXXXXXXXNXXXXXXXXXXXXGRISIL 229
           MDF+KRKA+TL+ I +   + +DKSPKG             N            GRISIL
Sbjct: 1   MDFEKRKAATLASIRS---SVTDKSPKGFLDEPIIPLLETINHHPSYFTTSSCSGRISIL 57

Query: 230 XXXXXXXXXN--KKAKGGKWVLISHDPVDPTSVLDLLY----NPSSVVDESCELVFRFEP 391
                    +  KKA+GG W+ I+HDP D   V+ LL+    N    +D+  ELVFRFEP
Sbjct: 58  SQPKPKSNDSTKKKARGGSWLYITHDPADSDLVISLLFPSKSNQIDPIDQPSELVFRFEP 117

Query: 392 LIVAVECRDVGSAHKLVSVAVSCGFRE 472
           LI+AVEC+D+GSA  LV++A+S GFRE
Sbjct: 118 LIIAVECKDLGSAQFLVALAISAGFRE 144


>ref|XP_002872703.1| hypothetical protein ARALYDRAFT_490107 [Arabidopsis lyrata subsp.
           lyrata] gi|297318540|gb|EFH48962.1| hypothetical protein
           ARALYDRAFT_490107 [Arabidopsis lyrata subsp. lyrata]
          Length = 996

 Score =  110 bits (276), Expect = 9e-23
 Identities = 65/147 (44%), Positives = 85/147 (57%), Gaps = 6/147 (4%)
 Frame = +2

Query: 50  MDFDKRKASTLSLINTPPQNYSDKSPKGXXXXXXXXXXXXXNXXXXXXXXXXXXGRISIL 229
           MDF+KRKA+TL+ I +   + +DKSPKG             N            GRISIL
Sbjct: 1   MDFEKRKAATLASIRS---SVTDKSPKGFLDEPIIPLLETINHHPSYFTTSSCSGRISIL 57

Query: 230 XXXXXXXXXN--KKAKGGKWVLISHDPVDPTSVLDLLY----NPSSVVDESCELVFRFEP 391
                    +  KKA+GG W+ I+HDP D   V+ LL+    N    +D+  ELVFRFEP
Sbjct: 58  SQPKPKSNDSTKKKARGGSWLYITHDPADSDLVISLLFPSKSNQIDPIDQPSELVFRFEP 117

Query: 392 LIVAVECRDVGSAHKLVSVAVSCGFRE 472
           LI+AVEC+D+GSA  LV++A+S GFRE
Sbjct: 118 LIIAVECKDLGSAQFLVALAISAGFRE 144