BLASTX nr result

ID: Cnidium21_contig00026201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026201
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23219.3| unnamed protein product [Vitis vinifera]              140   1e-35
ref|XP_002266593.2| PREDICTED: dihydrolipoyllysine-residue succi...   140   1e-35
gb|ABK96550.1| unknown [Populus trichocarpa x Populus deltoides]      135   5e-34
ref|XP_002300330.1| predicted protein [Populus trichocarpa] gi|2...   131   8e-33
ref|XP_002317337.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-32

>emb|CBI23219.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  140 bits (353), Expect(2) = 1e-35
 Identities = 70/78 (89%), Positives = 74/78 (94%)
 Frame = -2

Query: 235 QGDLVDAVVPFMGESISDGTLATFLKQPGDKVDVDEPIAQIETDKVTIDVASPEAGVIQK 56
           +GDLVDAVVPFMGESISDGTLA FLK+PGD V+VDEPIAQIETDKVTIDVASPEAGV+QK
Sbjct: 185 KGDLVDAVVPFMGESISDGTLAKFLKKPGDHVEVDEPIAQIETDKVTIDVASPEAGVVQK 244

Query: 55  FVANEGDTVEPGTKIAVI 2
           FVA EGD VEPGTKIAVI
Sbjct: 245 FVAKEGDVVEPGTKIAVI 262



 Score = 34.3 bits (77), Expect(2) = 1e-35
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -1

Query: 407 STMASRPTRKVVGSLQ-PFYVQTSRMKFSSDSGDLVDAV 294
           S ++S+P R+V   LQ    +Q     FSSD GDLVDAV
Sbjct: 154 SLVSSKPVREVTSFLQIDSPIQVQHRPFSSDKGDLVDAV 192


>ref|XP_002266593.2| PREDICTED: dihydrolipoyllysine-residue succinyltransferase
           component of 2-oxoglutarate dehydrogenase complex 2,
           mitochondrial [Vitis vinifera]
          Length = 473

 Score =  140 bits (353), Expect(2) = 1e-35
 Identities = 70/78 (89%), Positives = 74/78 (94%)
 Frame = -2

Query: 235 QGDLVDAVVPFMGESISDGTLATFLKQPGDKVDVDEPIAQIETDKVTIDVASPEAGVIQK 56
           +GDLVDAVVPFMGESISDGTLA FLK+PGD V+VDEPIAQIETDKVTIDVASPEAGV+QK
Sbjct: 96  KGDLVDAVVPFMGESISDGTLAKFLKKPGDHVEVDEPIAQIETDKVTIDVASPEAGVVQK 155

Query: 55  FVANEGDTVEPGTKIAVI 2
           FVA EGD VEPGTKIAVI
Sbjct: 156 FVAKEGDVVEPGTKIAVI 173



 Score = 34.3 bits (77), Expect(2) = 1e-35
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -1

Query: 407 STMASRPTRKVVGSLQ-PFYVQTSRMKFSSDSGDLVDAV 294
           S ++S+P R+V   LQ    +Q     FSSD GDLVDAV
Sbjct: 65  SLVSSKPVREVTSFLQIDSPIQVQHRPFSSDKGDLVDAV 103


>gb|ABK96550.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 474

 Score =  135 bits (339), Expect(2) = 5e-34
 Identities = 67/77 (87%), Positives = 72/77 (93%)
 Frame = -2

Query: 232 GDLVDAVVPFMGESISDGTLATFLKQPGDKVDVDEPIAQIETDKVTIDVASPEAGVIQKF 53
           GDLVDAVVPFMGESI+DGTLA FLK PGD+V+VDEPIAQIETDKVTIDVASPEAG IQ+ 
Sbjct: 92  GDLVDAVVPFMGESITDGTLAKFLKNPGDRVEVDEPIAQIETDKVTIDVASPEAGTIQQL 151

Query: 52  VANEGDTVEPGTKIAVI 2
           VA EG+TVEPGTKIAVI
Sbjct: 152 VAKEGETVEPGTKIAVI 168



 Score = 34.3 bits (77), Expect(2) = 5e-34
 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = -1

Query: 398 ASRPTRKVVGSLQP-FYVQTSRMKFSSDSGDLVDAV 294
           +++P R++   L+P +++      FSSD+GDLVDAV
Sbjct: 63  SNKPRREITAMLRPEYFIPLRSRSFSSDTGDLVDAV 98


>ref|XP_002300330.1| predicted protein [Populus trichocarpa] gi|222847588|gb|EEE85135.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  131 bits (330), Expect(2) = 8e-33
 Identities = 65/77 (84%), Positives = 71/77 (92%)
 Frame = -2

Query: 232 GDLVDAVVPFMGESISDGTLATFLKQPGDKVDVDEPIAQIETDKVTIDVASPEAGVIQKF 53
           GDLVDAVVPFMGESI+DGTLA FLK PGD V+VDE IAQIETDKVTIDVASPEAGVI+++
Sbjct: 97  GDLVDAVVPFMGESITDGTLAKFLKNPGDSVEVDEAIAQIETDKVTIDVASPEAGVIKEY 156

Query: 52  VANEGDTVEPGTKIAVI 2
           +A EGDTVEPG KIAVI
Sbjct: 157 IAKEGDTVEPGAKIAVI 173



 Score = 33.9 bits (76), Expect(2) = 8e-33
 Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = -1

Query: 431 CHLIISGRSTMASRPTRKVVGSLQ-PFYVQTSRMKFSSDSGDLVDAV 294
           C +   GR+ ++SRP R+VV +++     +T    FSSD+GDLVDAV
Sbjct: 58  CFVSPRGRA-ISSRPVREVVSNMELASSKKTWSRPFSSDTGDLVDAV 103


>ref|XP_002317337.1| predicted protein [Populus trichocarpa] gi|222860402|gb|EEE97949.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  136 bits (342), Expect(2) = 2e-32
 Identities = 67/77 (87%), Positives = 73/77 (94%)
 Frame = -2

Query: 232 GDLVDAVVPFMGESISDGTLATFLKQPGDKVDVDEPIAQIETDKVTIDVASPEAGVIQKF 53
           GDLVDAVVPFMGESI+DGTLA FLK PGD+V+VDEPIAQIETDKVTIDVASPEAGVI++ 
Sbjct: 96  GDLVDAVVPFMGESITDGTLAKFLKNPGDRVEVDEPIAQIETDKVTIDVASPEAGVIKEL 155

Query: 52  VANEGDTVEPGTKIAVI 2
           +A EGDTVEPGTKIAVI
Sbjct: 156 IAKEGDTVEPGTKIAVI 172



 Score = 27.7 bits (60), Expect(2) = 2e-32
 Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
 Frame = -1

Query: 431 CHLIISGRSTMASRPTRKVVGSLQPFYVQTSRM----KFSSDSGDLVDAV 294
           C   + GR+ ++SR  R+ V +++   +  S++     FSSDSGDLVDAV
Sbjct: 57  CLAPLRGRA-ISSRTMREGVSNME---LTASKLILSRPFSSDSGDLVDAV 102


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