BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026200
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containi...   327   1e-87
ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containi...   325   5e-87
ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containi...   325   5e-87
ref|XP_002511477.1| pentatricopeptide repeat-containing protein,...   325   5e-87
ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containi...   323   1e-86

>ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Glycine max]
          Length = 857

 Score =  327 bits (837), Expect = 1e-87
 Identities = 157/196 (80%), Positives = 179/196 (91%)
 Frame = -1

Query: 588 SVFSYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSL 409
           +V+SYT+IINAYGRNG++ ASLELLN MK+E+V P+ILTYNTVIN+CARGG  WEGLL L
Sbjct: 168 TVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGL 227

Query: 408 FAEMRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGK 229
           FAEMRH+GIQPD++TYNTLL ACA RGL DEAEMVFRTMN+ GIVPDI TYSYLV+TFGK
Sbjct: 228 FAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGK 287

Query: 228 LGKLEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAAT 49
           L +LEKVSELLR+ME  GNLPDITSYNVLLEAYA+LGSI  AMGVF+QMQAAGC+ NAAT
Sbjct: 288 LNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAAT 347

Query: 48  YSILLNLYGKNGRYDE 1
           YS+LLNLYGK+GRYD+
Sbjct: 348 YSVLLNLYGKHGRYDD 363



 Score =  112 bits (281), Expect = 4e-23
 Identities = 55/193 (28%), Positives = 106/193 (54%)
 Frame = -1

Query: 579 SYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSLFAE 400
           +Y+ ++N YG++G+Y+   +L   MK     P+  TYN +I     GGY  E +++LF +
Sbjct: 347 TYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKE-VVTLFHD 405

Query: 399 MRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGKLGK 220
           M  + ++P++ TY  L+ AC   GL ++A+ +   MN+ G+VP    Y+ ++E FG+   
Sbjct: 406 MAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAAL 465

Query: 219 LEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAATYSI 40
            E+   +   M   G+ P + +YN L+ A+A  G    A  +  +M  +G   +  +++ 
Sbjct: 466 YEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNG 525

Query: 39  LLNLYGKNGRYDE 1
           ++  + + G+Y+E
Sbjct: 526 VIEAFRQGGQYEE 538



 Score =  102 bits (253), Expect = 6e-20
 Identities = 56/193 (29%), Positives = 105/193 (54%)
 Frame = -1

Query: 579 SYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSLFAE 400
           +Y  +I A G+ G YE + ++L  M ++ V+P+   Y  VI +  +   + E L+ +F  
Sbjct: 417 TYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALV-MFNT 475

Query: 399 MRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGKLGK 220
           M   G  P + TYN+L+ A A  GL  EAE +   MN+ G+  D+ +++ ++E F + G+
Sbjct: 476 MNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQ 535

Query: 219 LEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAATYSI 40
            E+  +   +ME +   P+  +   +L  Y   G ++     F++++A+G +P+   Y +
Sbjct: 536 YEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCM 595

Query: 39  LLNLYGKNGRYDE 1
           +L LY KN R ++
Sbjct: 596 MLALYAKNDRLND 608



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
 Frame = -1

Query: 429 WEGLLSLFAEM-RHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYS 253
           W+  L LF  M R    +P+   +  +++     GL D+   VF  M   G+V  + +Y+
Sbjct: 114 WQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYT 173

Query: 252 YLVETFGKLGKLEKVSELLRDMESSGNLPDITSYNVLLEAYADLG-SINGAMGVFKQMQA 76
            ++  +G+ G+     ELL  M+     P I +YN ++ A A  G    G +G+F +M+ 
Sbjct: 174 AIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRH 233

Query: 75  AGCMPNAATYSILLNLYGKNGRYDE 1
            G  P+  TY+ LL      G  DE
Sbjct: 234 EGIQPDVITYNTLLGACAHRGLGDE 258


>ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  325 bits (832), Expect = 5e-87
 Identities = 157/196 (80%), Positives = 180/196 (91%)
 Frame = -1

Query: 588 SVFSYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSL 409
           SVFSYT++INAYGRNG+YE SLELL RMK+E+V PNILTYNTVIN+CARG   WEGLL L
Sbjct: 182 SVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGL 241

Query: 408 FAEMRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGK 229
           FAEMRH+G+QPDLVTYNTLLSACA+RGL DEAEMVF+TM +GGIVP+ITTYSY+VETFGK
Sbjct: 242 FAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGK 301

Query: 228 LGKLEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAAT 49
           LGKLEKV+ LL++MES G LPDI+SYNVL+EA+A LGSI  AM VFKQMQAAGC+PNA+T
Sbjct: 302 LGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAST 361

Query: 48  YSILLNLYGKNGRYDE 1
           YSILLNLYGK+GRYD+
Sbjct: 362 YSILLNLYGKHGRYDD 377



 Score =  111 bits (278), Expect = 8e-23
 Identities = 59/193 (30%), Positives = 104/193 (53%)
 Frame = -1

Query: 579 SYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSLFAE 400
           +Y+ ++N YG++G+Y+   EL  +MK+    P+  TYN +I     GGY  E +++LF +
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKE-VVTLFHD 419

Query: 399 MRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGKLGK 220
           +  + I P++ TY  L+ AC   GL ++A+ +   MN  GIVP    YS L+E +G+   
Sbjct: 420 LVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAAL 479

Query: 219 LEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAATYSI 40
            ++       M   G+   I +YN L+  +A  G       +  +M+  G   NA ++S 
Sbjct: 480 YDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSG 539

Query: 39  LLNLYGKNGRYDE 1
           ++  Y ++G+Y+E
Sbjct: 540 IIEGYRQSGQYEE 552



 Score =  101 bits (251), Expect = 1e-19
 Identities = 60/195 (30%), Positives = 98/195 (50%)
 Frame = -1

Query: 585 VFSYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSLF 406
           + +Y+ I+  +G+ GK E    LL  M+ E  LP+I +YN +I + A+ G   E +  +F
Sbjct: 289 ITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAM-DVF 347

Query: 405 AEMRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGKL 226
            +M+  G  P+  TY+ LL+     G  D+   +F  M +    PD TTY+ L+  FG+ 
Sbjct: 348 KQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEG 407

Query: 225 GKLEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAATY 46
           G  ++V  L  D+      P++ +Y  L+ A    G    A  +   M   G +P++  Y
Sbjct: 408 GYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAY 467

Query: 45  SILLNLYGKNGRYDE 1
           S L+  YG+   YDE
Sbjct: 468 SGLIEAYGQAALYDE 482



 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
 Frame = -1

Query: 579  SYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSLFAE 400
            +Y  +I  +G  G ++  + L + +  E + PN+ TY  ++ +C +GG H +    LF  
Sbjct: 396  TYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILF-H 454

Query: 399  MRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGKLGK 220
            M   GI P    Y+ L+ A     L DEA + F TMN+ G    I TY+ L+ TF + G 
Sbjct: 455  MNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGL 514

Query: 219  LEKVSELLRDMESSGNLPDITSYNVLLEAYADLG----------------------SING 106
             ++   +L  M   G   +  S++ ++E Y   G                      ++ G
Sbjct: 515  YKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEG 574

Query: 105  AMGV-------------FKQMQAAGCMPNAATYSILLNLYGKNGRYDE 1
             +GV             F +++A+G +P+   Y ++L +Y KNGR+D+
Sbjct: 575  VLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDD 622



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
 Frame = -1

Query: 447 ARGGYHWEGLLSLFAEM-RHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVP 271
           ARG   W+  L LF  M R    +P+   Y  ++S     GL ++   +F  M   G++ 
Sbjct: 124 ARGD--WQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIR 181

Query: 270 DITTYSYLVETFGKLGKLEKVSELLRDMESSGNLPDITSYNVLLEAYA--DLGSINGAMG 97
            + +Y+ L+  +G+ G+ E   ELL  M+     P+I +YN ++ A A  DL    G +G
Sbjct: 182 SVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDL-DWEGLLG 240

Query: 96  VFKQMQAAGCMPNAATYSILLNLYGKNGRYDE 1
           +F +M+  G  P+  TY+ LL+     G  DE
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDE 272



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 5/198 (2%)
 Frame = -1

Query: 588  SVFSYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSL 409
            ++ +Y S+I+ + R G Y+    +L+RM++  +  N  +++ +I    + G  +E  +  
Sbjct: 498  TIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSG-QYEEAIKA 556

Query: 408  FAEMRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGK 229
            F EM     + D  T   +L      GL DE++  F  +   GI+P +  Y  ++  + K
Sbjct: 557  FVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAK 616

Query: 228  LGKLEKVSELLRDMESS--GNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNA 55
             G+ +  SELL +M  +   ++  +    ++   Y D  +      VF ++ A GC    
Sbjct: 617  NGRWDDASELLDEMIKTRVSSIHQVIG-QMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGM 675

Query: 54   ATYSILLNL---YGKNGR 10
              Y+ LL      G+ GR
Sbjct: 676  RFYNTLLEALWWLGQKGR 693


>ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  325 bits (832), Expect = 5e-87
 Identities = 157/196 (80%), Positives = 180/196 (91%)
 Frame = -1

Query: 588 SVFSYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSL 409
           SVFSYT++INAYGRNG+YE SLELL RMK+E+V PNILTYNTVIN+CARG   WEGLL L
Sbjct: 182 SVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGL 241

Query: 408 FAEMRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGK 229
           FAEMRH+G+QPDLVTYNTLLSACA+RGL DEAEMVF+TM +GGIVP+ITTYSY+VETFGK
Sbjct: 242 FAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGK 301

Query: 228 LGKLEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAAT 49
           LGKLEKV+ LL++MES G LPDI+SYNVL+EA+A LGSI  AM VFKQMQAAGC+PNA+T
Sbjct: 302 LGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAST 361

Query: 48  YSILLNLYGKNGRYDE 1
           YSILLNLYGK+GRYD+
Sbjct: 362 YSILLNLYGKHGRYDD 377



 Score =  111 bits (278), Expect = 8e-23
 Identities = 59/193 (30%), Positives = 104/193 (53%)
 Frame = -1

Query: 579 SYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSLFAE 400
           +Y+ ++N YG++G+Y+   EL  +MK+    P+  TYN +I     GGY  E +++LF +
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKE-VVTLFHD 419

Query: 399 MRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGKLGK 220
           +  + I P++ TY  L+ AC   GL ++A+ +   MN  GIVP    YS L+E +G+   
Sbjct: 420 LVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAAL 479

Query: 219 LEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAATYSI 40
            ++       M   G+   I +YN L+  +A  G       +  +M+  G   NA ++S 
Sbjct: 480 YDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSG 539

Query: 39  LLNLYGKNGRYDE 1
           ++  Y ++G+Y+E
Sbjct: 540 IIEGYRQSGQYEE 552



 Score =  101 bits (251), Expect = 1e-19
 Identities = 60/195 (30%), Positives = 98/195 (50%)
 Frame = -1

Query: 585 VFSYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSLF 406
           + +Y+ I+  +G+ GK E    LL  M+ E  LP+I +YN +I + A+ G   E +  +F
Sbjct: 289 ITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAM-DVF 347

Query: 405 AEMRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGKL 226
            +M+  G  P+  TY+ LL+     G  D+   +F  M +    PD TTY+ L+  FG+ 
Sbjct: 348 KQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEG 407

Query: 225 GKLEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAATY 46
           G  ++V  L  D+      P++ +Y  L+ A    G    A  +   M   G +P++  Y
Sbjct: 408 GYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAY 467

Query: 45  SILLNLYGKNGRYDE 1
           S L+  YG+   YDE
Sbjct: 468 SGLIEAYGQAALYDE 482



 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
 Frame = -1

Query: 579  SYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSLFAE 400
            +Y  +I  +G  G ++  + L + +  E + PN+ TY  ++ +C +GG H +    LF  
Sbjct: 396  TYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILF-H 454

Query: 399  MRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGKLGK 220
            M   GI P    Y+ L+ A     L DEA + F TMN+ G    I TY+ L+ TF + G 
Sbjct: 455  MNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGL 514

Query: 219  LEKVSELLRDMESSGNLPDITSYNVLLEAYADLG----------------------SING 106
             ++   +L  M   G   +  S++ ++E Y   G                      ++ G
Sbjct: 515  YKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEG 574

Query: 105  AMGV-------------FKQMQAAGCMPNAATYSILLNLYGKNGRYDE 1
             +GV             F +++A+G +P+   Y ++L +Y KNGR+D+
Sbjct: 575  VLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDD 622



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
 Frame = -1

Query: 447 ARGGYHWEGLLSLFAEM-RHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVP 271
           ARG   W+  L LF  M R    +P+   Y  ++S     GL ++   +F  M   G++ 
Sbjct: 124 ARGD--WQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIR 181

Query: 270 DITTYSYLVETFGKLGKLEKVSELLRDMESSGNLPDITSYNVLLEAYA--DLGSINGAMG 97
            + +Y+ L+  +G+ G+ E   ELL  M+     P+I +YN ++ A A  DL    G +G
Sbjct: 182 SVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDL-DWEGLLG 240

Query: 96  VFKQMQAAGCMPNAATYSILLNLYGKNGRYDE 1
           +F +M+  G  P+  TY+ LL+     G  DE
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDE 272



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 5/198 (2%)
 Frame = -1

Query: 588  SVFSYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSL 409
            ++ +Y S+I+ + R G Y+    +L+RM++  +  N  +++ +I    + G  +E  +  
Sbjct: 498  TIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSG-QYEEAIKA 556

Query: 408  FAEMRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGK 229
            F EM     + D  T   +L      GL DE++  F  +   GI+P +  Y  ++  + K
Sbjct: 557  FVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAK 616

Query: 228  LGKLEKVSELLRDMESS--GNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNA 55
             G+ +  SELL +M  +   ++  +    ++   Y D  +      VF ++ A GC    
Sbjct: 617  NGRWDDASELLDEMIKTRVSSIHQVIG-QMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGM 675

Query: 54   ATYSILLNL---YGKNGR 10
              Y+ LL      G+ GR
Sbjct: 676  RFYNTLLEALWWLGQKGR 693


>ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550592|gb|EEF52079.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 754

 Score =  325 bits (832), Expect = 5e-87
 Identities = 157/196 (80%), Positives = 179/196 (91%)
 Frame = -1

Query: 588 SVFSYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSL 409
           SVFSYT++IN+YGR+G+YE SLELL RMKKEKV P+ILTYNTVINSCARGG +WEGLLSL
Sbjct: 176 SVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSL 235

Query: 408 FAEMRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGK 229
           FAEMRH+GIQPD++TYNTLL+ACA+RGL DEAEMVFRTMN+GG+VPDITTY  LVETFGK
Sbjct: 236 FAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGK 295

Query: 228 LGKLEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAAT 49
           L KLEKVSELL++MESSGNLPDI+SYNVLLEAYA  G I  AMGVF+QMQ A C+PNA T
Sbjct: 296 LNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVT 355

Query: 48  YSILLNLYGKNGRYDE 1
           YS+LLNLYG +GRYD+
Sbjct: 356 YSMLLNLYGGHGRYDD 371



 Score =  107 bits (267), Expect = 2e-21
 Identities = 53/193 (27%), Positives = 105/193 (54%)
 Frame = -1

Query: 579 SYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSLFAE 400
           +Y+ ++N YG +G+Y+   EL   MK     P++ TYN +I     GGY  E +++LF +
Sbjct: 355 TYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKE-VVTLFHD 413

Query: 399 MRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGKLGK 220
           M  + ++P++ TY  L+ AC   GL ++A+ +   M++ GIVP    Y+ ++E +G+   
Sbjct: 414 MVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAAS 473

Query: 219 LEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAATYSI 40
            E+   +   M   G+ P + +YN L+  +A  G    +  +  +M  +G   +  +++ 
Sbjct: 474 YEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNG 533

Query: 39  LLNLYGKNGRYDE 1
           ++  Y + G+++E
Sbjct: 534 VIEGYRQGGQFEE 546



 Score =  105 bits (263), Expect = 4e-21
 Identities = 55/195 (28%), Positives = 97/195 (49%)
 Frame = -1

Query: 585 VFSYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSLF 406
           + SY  ++ AY   G    ++ +  +M++ + +PN +TY+ ++N     G  ++ +  LF
Sbjct: 318 ISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHG-RYDDVRELF 376

Query: 405 AEMRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGKL 226
            EM+    +PD+ TYN L+      G   E   +F  M +  + P++ TY  L+   GK 
Sbjct: 377 LEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKG 436

Query: 225 GKLEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAATY 46
           G  E   ++L  M+  G +P   +Y  ++EAY    S   A+ +F  M   G  P   TY
Sbjct: 437 GLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETY 496

Query: 45  SILLNLYGKNGRYDE 1
           + L+N++ + G Y E
Sbjct: 497 NSLINMFARGGLYKE 511



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 46/169 (27%), Positives = 83/169 (49%)
 Frame = -1

Query: 588 SVFSYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSL 409
           S  +YT +I AYG+   YE +L + N M +    P + TYN++IN  ARGG + E   ++
Sbjct: 457 STKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKES-EAI 515

Query: 408 FAEMRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGK 229
             +M   G+  D  ++N ++      G  +EA   +  +      PD  T+  ++  +  
Sbjct: 516 MWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCT 575

Query: 228 LGKLEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQM 82
            G +++  E  R++ +SG LP +  Y +++  YA     + A  V  +M
Sbjct: 576 AGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEM 624



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
 Frame = -1

Query: 543 GKYEASLE-LLNRMKKE----------KVLPNILTYNT---VINSCARGGYHWEGLLSLF 406
           GKY   +E L+N++             ++  N L+ N    V    A+ G  W+  L LF
Sbjct: 71  GKYSYDVETLINKLSSLPPRGSIARCLEIFKNKLSLNDFALVFKEFAQRG-DWQRSLRLF 129

Query: 405 AEM-RHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGK 229
             M R    +P+   Y  ++S     GL +++  +F  M   G+   + +Y+ L+ ++G+
Sbjct: 130 KYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGR 189

Query: 228 LGKLEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSIN--GAMGVFKQMQAAGCMPNA 55
            G+ E   ELL  M+     P I +YN ++ + A  G +N  G + +F +M+  G  P+ 
Sbjct: 190 HGQYEVSLELLERMKKEKVTPSILTYNTVINSCA-RGGLNWEGLLSLFAEMRHEGIQPDI 248

Query: 54  ATYSILLNLYGKNGRYDE 1
            TY+ LLN     G  DE
Sbjct: 249 ITYNTLLNACANRGLGDE 266


>ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Glycine max]
          Length = 859

 Score =  323 bits (828), Expect = 1e-86
 Identities = 155/196 (79%), Positives = 178/196 (90%)
 Frame = -1

Query: 588 SVFSYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSL 409
           +V+ YT++INAYGRNG++ ASLELLN MK+E+V P+ILTYNTVIN+CARGG  WEGLL L
Sbjct: 170 TVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGL 229

Query: 408 FAEMRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGK 229
           FAEMRH+GIQPD++TYNTLL ACA RGL DEAEMVFRTMN+ GIVPDI TYSYLV+TFGK
Sbjct: 230 FAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGK 289

Query: 228 LGKLEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAAT 49
           L +LEKVSELLR+MES GNLPDITSYNVLLEAYA+LGSI  AM VF+QMQAAGC+ NAAT
Sbjct: 290 LNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAAT 349

Query: 48  YSILLNLYGKNGRYDE 1
           YS+LLNLYGK+GRYD+
Sbjct: 350 YSVLLNLYGKHGRYDD 365



 Score =  110 bits (274), Expect = 2e-22
 Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 35/228 (15%)
 Frame = -1

Query: 579  SYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSLFAE 400
            +Y+ ++N YG++G+Y+   ++   MK     P+  TYN +I     GGY  E +++LF +
Sbjct: 349  TYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKE-VVTLFHD 407

Query: 399  MRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGKLGK 220
            M  + ++P++ TY  L+ AC   GL ++A+ +   MN+ GIVP    Y+ ++E FG+   
Sbjct: 408  MVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAAL 467

Query: 219  LEKVSELLRDMESSGNLPDITSYNVLLEAYA----------------------DLGSING 106
             E+   +   M   G+ P + +YN  + A+A                      D+ S NG
Sbjct: 468  YEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNG 527

Query: 105  AMGVFKQ-------------MQAAGCMPNAATYSILLNLYGKNGRYDE 1
             +  F+Q             M+ A C PN  T  ++L++Y   G  DE
Sbjct: 528  VIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDE 575



 Score =  100 bits (250), Expect = 1e-19
 Identities = 54/193 (27%), Positives = 106/193 (54%)
 Frame = -1

Query: 579 SYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSLFAE 400
           +Y  +I A G+ G YE + ++L  M ++ ++P+   Y  VI +  +   + E L+ +F  
Sbjct: 419 TYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALV-VFNT 477

Query: 399 MRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGKLGK 220
           M   G  P + TYN+ + A A  GL  EAE +   MN+ G+  D+ +++ +++ F + G+
Sbjct: 478 MNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQ 537

Query: 219 LEKVSELLRDMESSGNLPDITSYNVLLEAYADLGSINGAMGVFKQMQAAGCMPNAATYSI 40
            E+  +   +ME +   P+  +  V+L  Y   G ++ +   F++++A+G +P+   Y +
Sbjct: 538 YEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCL 597

Query: 39  LLNLYGKNGRYDE 1
           +L LY KN R ++
Sbjct: 598 MLALYAKNDRLND 610



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 39/134 (29%), Positives = 73/134 (54%)
 Frame = -1

Query: 588 SVFSYTSIINAYGRNGKYEASLELLNRMKKEKVLPNILTYNTVINSCARGGYHWEGLLSL 409
           +V +Y S I+A+ R G Y+ +  +L+RM +  +  ++ ++N VI +  +GG + E + S 
Sbjct: 486 TVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKS- 544

Query: 408 FAEMRHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYSYLVETFGK 229
           + EM     +P+ +T   +LS   S GL DE+E  F+ +   GI+P +  Y  ++  + K
Sbjct: 545 YVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAK 604

Query: 228 LGKLEKVSELLRDM 187
             +L     L+ +M
Sbjct: 605 NDRLNDAYNLIDEM 618



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
 Frame = -1

Query: 429 WEGLLSLFAEM-RHDGIQPDLVTYNTLLSACASRGLDDEAEMVFRTMNDGGIVPDITTYS 253
           W+  L LF  M R    +P+   Y  +++     GL D+   VF  M   G+   +  Y+
Sbjct: 116 WQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYT 175

Query: 252 YLVETFGKLGKLEKVSELLRDMESSGNLPDITSYNVLLEAYADLG-SINGAMGVFKQMQA 76
            ++  +G+ G+     ELL  M+     P I +YN ++ A A  G    G +G+F +M+ 
Sbjct: 176 AVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRH 235

Query: 75  AGCMPNAATYSILLNLYGKNGRYDE 1
            G  P+  TY+ LL      G  DE
Sbjct: 236 EGIQPDVITYNTLLGACAHRGLGDE 260