BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026183
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
emb|CBI15289.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11
ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11
ref|XP_002321537.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11

>ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
           [Vitis vinifera]
          Length = 875

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
 Frame = -3

Query: 445 KIDGKSSSGTEPGAKSKSNVHEAKGSAQNIGSVSGVNNSFVKKATHPAESERQSNFHDKR 266
           K+  +SS+     + S S+ H  +G     GSV G ++       +  ++   S+    +
Sbjct: 193 KVRAESSANIAAASNSTSSYHSTRGKGDKSGSVKGCSHVGDTWTRNTVDTRSLSSDTHNK 252

Query: 265 RTMPQQVRANPN------RFVSNVLPAEGKFVGDVSEDFSRRPKLAKQSSTVSSMARQFT 104
           R+MPQ+ +A  N       F SNV  +E +FVG ++  FS+  +  K    ++ ++RQF 
Sbjct: 253 RSMPQKSKAYSNYSTSNSNFNSNVRNSEPRFVGGIAGGFSKPLRDTKMIG-IAPVSRQFG 311

Query: 103 RFGNVVESVSQILRQLHWSPATEVALGKLNCSMD 2
             G+VVE+VS+ILRQL W PA E AL  LNC MD
Sbjct: 312 SSGHVVENVSRILRQLSWGPAAEEALRNLNCLMD 345


>emb|CBI15289.3| unnamed protein product [Vitis vinifera]
          Length = 793

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/148 (31%), Positives = 73/148 (49%)
 Frame = -3

Query: 445 KIDGKSSSGTEPGAKSKSNVHEAKGSAQNIGSVSGVNNSFVKKATHPAESERQSNFHDKR 266
           K+  +SS+     + S S+ H  +G     GSV G ++       +  ++   S+    +
Sbjct: 220 KVRAESSANIAAASNSTSSYHSTRGKGDKSGSVKGCSHVGDTWTRNTVDTRSLSSDTHNK 279

Query: 265 RTMPQQVRANPNRFVSNVLPAEGKFVGDVSEDFSRRPKLAKQSSTVSSMARQFTRFGNVV 86
           R+MPQ+ +A  N   SN              +F+  P    +   ++ ++RQF   G+VV
Sbjct: 280 RSMPQKSKAYSNYSTSN-------------SNFNSNPLRDTKMIGIAPVSRQFGSSGHVV 326

Query: 85  ESVSQILRQLHWSPATEVALGKLNCSMD 2
           E+VS+ILRQL W PA E AL  LNC MD
Sbjct: 327 ENVSRILRQLSWGPAAEEALRNLNCLMD 354


>ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 879

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 53/147 (36%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
 Frame = -3

Query: 418 TEPG-AKSKSNVHEAKGSAQNIGSVSG---VNNSFVKKATHPAESERQSNFHDKRRTMPQ 251
           T PG +K  +N H AKG A       G   V +S  +K+   A      N HD RR +PQ
Sbjct: 206 THPGPSKHTNNHHGAKGKADKSNLAKGFKHVASSGTEKSG--AAPNIPVNNHD-RRALPQ 262

Query: 250 QVRANPNRFV----SNVLPAEGKFVGDVSEDFSRRPKLAKQSSTVSSMARQFTRFGNVVE 83
           + R + N FV    SN+  +  +  G   E F++  +     + +    R FT  G+VVE
Sbjct: 263 RTRTHSNHFVANFGSNMQSSNPQMAGPFKESFNKHTRDLNMPAGIVPTKRHFTNSGHVVE 322

Query: 82  SVSQILRQLHWSPATEVALGKLNCSMD 2
            V  IL+QL W PATE  L  LN S+D
Sbjct: 323 VVKDILKQLRWGPATEKTLYNLNFSID 349


>ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 882

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 53/145 (36%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
 Frame = -3

Query: 412 PG-AKSKSNVHEAKGSAQNIGSVSG---VNNSFVKKATHPAESERQSNFHDKRRTMPQQV 245
           PG +K  +N H AKG A       G   V  S  +K+   A      N HD RR +PQ+ 
Sbjct: 211 PGPSKHTNNNHGAKGKANKSNLAKGFKYVAASGTEKSG--AAPNIPVNNHD-RRALPQRT 267

Query: 244 RANPNRFV----SNVLPAEGKFVGDVSEDFSRRPKLAKQSSTVSSMARQFTRFGNVVESV 77
           R N N FV    SN+  +  +      E F++  +     + ++   R FT  G+VVE V
Sbjct: 268 RTNSNHFVTNFGSNMQSSNPQMARPFKESFNKHTRDLNMPAGIAPTRRHFTNSGHVVEGV 327

Query: 76  SQILRQLHWSPATEVALGKLNCSMD 2
             IL+QL W PATE AL  LN S+D
Sbjct: 328 KDILKQLRWGPATEKALYNLNFSID 352


>ref|XP_002321537.1| predicted protein [Populus trichocarpa] gi|222868533|gb|EEF05664.1|
           predicted protein [Populus trichocarpa]
          Length = 834

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
 Frame = -3

Query: 394 SNVHEAKGSAQNIGSVSGVNNSFVKKATHPAESERQSNF-----HDKRRTMPQQVRANPN 230
           SN      S ++ G+ S     F + ++  A+S   S+       DKRRT+PQ+++A PN
Sbjct: 190 SNAAVNYNSMKDRGNKSSFVRGFKQVSSIAADSSLDSHSLPSDAFDKRRTIPQRLKAQPN 249

Query: 229 RFVSNVLPAEGKFVGDVSEDFSRRPKLAKQSSTVSSMARQFTRFGNVVESVSQILRQLHW 50
           R                     R  +  K  + V+  ARQF   G+VVE+VSQILRQL W
Sbjct: 250 R---------------------RPSRDTKMPAVVARSARQFVSTGHVVENVSQILRQLRW 288

Query: 49  SPATEVALGKLNCSMD 2
            P+ E AL  LNC MD
Sbjct: 289 GPSAEEALVNLNCHMD 304