BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026182
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containi...   134   4e-54
ref|XP_002321537.1| predicted protein [Populus trichocarpa] gi|2...   120   3e-52
emb|CBI15289.3| unnamed protein product [Vitis vinifera]              126   7e-52
ref|XP_002511505.1| pentatricopeptide repeat-containing protein,...   119   8e-51
ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-45

>ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
           [Vitis vinifera]
          Length = 875

 Score =  134 bits (337), Expect(2) = 4e-54
 Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 9/207 (4%)
 Frame = +3

Query: 399 SVSFLSDIVSYKIPTSDGSGILSSQQSHVVERVRPLSTIKASNVKALAR---EKIDGKSS 569
           +V+FLSD+V+YKIP SDGSG+L   Q+ +V+  +PLS IK++N+K + +    K+  +SS
Sbjct: 140 AVNFLSDLVNYKIPMSDGSGMLKLPQNCMVDPTKPLSKIKSTNIKPIRKGKFSKVRAESS 199

Query: 570 SGTEPGTKSKSNVHEAKGCAQNIGSVSGVNHSFQKKASQPAESERQSNFHDQRRTMPQQV 749
           +     + S S+ H  +G     GSV G +H          ++   S+    +R+MPQ+ 
Sbjct: 200 ANIAAASNSTSSYHSTRGKGDKSGSVKGCSHVGDTWTRNTVDTRSLSSDTHNKRSMPQKS 259

Query: 750 KPNPN------RFVPNVLPAEGKFVGEVSEDFNRRPKLAKQSSTVSSMARQFTRSGNVVE 911
           K   N       F  NV  +E +FVG ++  F+ +P    +   ++ ++RQF  SG+VVE
Sbjct: 260 KAYSNYSTSNSNFNSNVRNSEPRFVGGIAGGFS-KPLRDTKMIGIAPVSRQFGSSGHVVE 318

Query: 912 SVSNILRQLNWSPATEVALGKLNCSMD 992
           +VS ILRQL+W PA E AL  LNC MD
Sbjct: 319 NVSRILRQLSWGPAAEEALRNLNCLMD 345



 Score =  104 bits (260), Expect(2) = 4e-54
 Identities = 62/141 (43%), Positives = 84/141 (59%), Gaps = 12/141 (8%)
 Frame = +1

Query: 16  MLRTKQLGTLSQSARFFL-NGSQCNAGDGNSCTCAEDETCISRKQNTKNVVRDAQAPSAL 192
           MLRTKQ+G LS SAR  L +G++ +  DGNSC C+EDETC+S KQ+ +N V   Q  + L
Sbjct: 1   MLRTKQIGPLSNSARSILISGTRSSTPDGNSCPCSEDETCVSTKQHARNEVLIMQKQTTL 60

Query: 193 ASKTSIKVSSLISGDI-----------VSSPASSPQVISTPSNLGRIATVTYSSGGDCVQ 339
           ASKT+ +V  L  GD            V    S  QV++ P ++     V+Y S    V 
Sbjct: 61  ASKTAARVGPLFLGDAVKVVGSQKVESVEHATSLAQVVAAPRSVVGSDCVSYVSDNVGVN 120

Query: 340 NDIMHPSPPMSDQFVKAGIAA 402
           ND +H +PP+SDQF++AGI A
Sbjct: 121 NDAVH-APPISDQFIRAGIVA 140


>ref|XP_002321537.1| predicted protein [Populus trichocarpa] gi|222868533|gb|EEF05664.1|
           predicted protein [Populus trichocarpa]
          Length = 834

 Score =  120 bits (301), Expect(2) = 3e-52
 Identities = 66/131 (50%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
 Frame = +1

Query: 16  MLRTKQLGTLSQSAR-FFLNGSQCNAGDGNS-CTCAEDETCISRKQNTKNVVRDAQAPSA 189
           MLR KQLG LS SAR FFL+GS+C+A DG+S CTC+EDETC+S +Q  +N +  AQ PS 
Sbjct: 1   MLRAKQLGNLSSSARSFFLSGSRCSATDGSSSCTCSEDETCVSTRQQPRNSILLAQKPSN 60

Query: 190 LASKTSIKVSSLISGDIVSSPASSPQVISTPSNLGRIATVTYSSGGDCVQNDIMHPSPPM 369
             SKTS +V + +SGD       S  ++   S+ G    V+Y+ G D  + D+ H SPP+
Sbjct: 61  FGSKTSARVEASVSGD------GSSFLLPQKSSCGMSGCVSYAIGIDIAEKDVGHSSPPI 114

Query: 370 SDQFVKAGIAA 402
           SDQFV+ GIAA
Sbjct: 115 SDQFVRVGIAA 125



 Score =  112 bits (280), Expect(2) = 3e-52
 Identities = 77/206 (37%), Positives = 113/206 (54%), Gaps = 8/206 (3%)
 Frame = +3

Query: 399 SVSFLSDIVSYKIPTSDGSGILSSQQSHVVERVRPLSTIKASNVKALARE---KIDGKSS 569
           +VSFLSD+V+YK+PTSDG+ +++S  + +++  R LS IK+SNVK + RE   K    SS
Sbjct: 125 AVSFLSDLVNYKLPTSDGT-VINSTINCMIDPTRQLSNIKSSNVKPIRRENFTKAYPNSS 183

Query: 570 SGTEPGTKSKSNVHEAKGCAQNIGSVSGVNHSFQKKASQPAESERQSNF-----HDQRRT 734
           +    G+ +  N +  K    + G+ S     F++ +S  A+S   S+       D+RRT
Sbjct: 184 AEIPVGSNAAVNYNSMK----DRGNKSSFVRGFKQVSSIAADSSLDSHSLPSDAFDKRRT 239

Query: 735 MPQQVKPNPNRFVPNVLPAEGKFVGEVSEDFNRRPKLAKQSSTVSSMARQFTRSGNVVES 914
           +PQ++K  PNR                     R  +  K  + V+  ARQF  +G+VVE+
Sbjct: 240 IPQRLKAQPNR---------------------RPSRDTKMPAVVARSARQFVSTGHVVEN 278

Query: 915 VSNILRQLNWSPATEVALGKLNCSMD 992
           VS ILRQL W P+ E AL  LNC MD
Sbjct: 279 VSQILRQLRWGPSAEEALVNLNCHMD 304


>emb|CBI15289.3| unnamed protein product [Vitis vinifera]
          Length = 793

 Score =  126 bits (317), Expect(2) = 7e-52
 Identities = 74/201 (36%), Positives = 110/201 (54%), Gaps = 3/201 (1%)
 Frame = +3

Query: 399 SVSFLSDIVSYKIPTSDGSGILSSQQSHVVERVRPLSTIKASNVKALAR---EKIDGKSS 569
           +V+FLSD+V+YKIP SDGSG+L   Q+ +V+  +PLS IK++N+K + +    K+  +SS
Sbjct: 167 AVNFLSDLVNYKIPMSDGSGMLKLPQNCMVDPTKPLSKIKSTNIKPIRKGKFSKVRAESS 226

Query: 570 SGTEPGTKSKSNVHEAKGCAQNIGSVSGVNHSFQKKASQPAESERQSNFHDQRRTMPQQV 749
           +     + S S+ H  +G     GSV G +H          ++   S+    +R+MPQ+ 
Sbjct: 227 ANIAAASNSTSSYHSTRGKGDKSGSVKGCSHVGDTWTRNTVDTRSLSSDTHNKRSMPQKS 286

Query: 750 KPNPNRFVPNVLPAEGKFVGEVSEDFNRRPKLAKQSSTVSSMARQFTRSGNVVESVSNIL 929
           K   N    N              +FN  P    +   ++ ++RQF  SG+VVE+VS IL
Sbjct: 287 KAYSNYSTSN-------------SNFNSNPLRDTKMIGIAPVSRQFGSSGHVVENVSRIL 333

Query: 930 RQLNWSPATEVALGKLNCSMD 992
           RQL+W PA E AL  LNC MD
Sbjct: 334 RQLSWGPAAEEALRNLNCLMD 354



 Score =  104 bits (260), Expect(2) = 7e-52
 Identities = 62/141 (43%), Positives = 84/141 (59%), Gaps = 12/141 (8%)
 Frame = +1

Query: 16  MLRTKQLGTLSQSARFFL-NGSQCNAGDGNSCTCAEDETCISRKQNTKNVVRDAQAPSAL 192
           MLRTKQ+G LS SAR  L +G++ +  DGNSC C+EDETC+S KQ+ +N V   Q  + L
Sbjct: 28  MLRTKQIGPLSNSARSILISGTRSSTPDGNSCPCSEDETCVSTKQHARNEVLIMQKQTTL 87

Query: 193 ASKTSIKVSSLISGDI-----------VSSPASSPQVISTPSNLGRIATVTYSSGGDCVQ 339
           ASKT+ +V  L  GD            V    S  QV++ P ++     V+Y S    V 
Sbjct: 88  ASKTAARVGPLFLGDAVKVVGSQKVESVEHATSLAQVVAAPRSVVGSDCVSYVSDNVGVN 147

Query: 340 NDIMHPSPPMSDQFVKAGIAA 402
           ND +H +PP+SDQF++AGI A
Sbjct: 148 NDAVH-APPISDQFIRAGIVA 167


>ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550620|gb|EEF52107.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 876

 Score =  119 bits (297), Expect(2) = 8e-51
 Identities = 69/141 (48%), Positives = 92/141 (65%), Gaps = 12/141 (8%)
 Frame = +1

Query: 16  MLRTKQLGTLSQSAR-FFLNGSQCNAGDGNSCTCAEDETCISRKQNTKNVVRDAQAPSAL 192
           MLR KQL  LS +AR FFL+GS+C+  DG+SCTC+EDE+C+ R+Q T+N    AQ   AL
Sbjct: 1   MLRAKQLSNLSSNARSFFLSGSRCSTSDGSSCTCSEDESCLPRRQQTRNNAVLAQRGPAL 60

Query: 193 ASKTSIKVS-SLISGD----IVSSPASS------PQVISTPSNLGRIATVTYSSGGDCVQ 339
             K S +VS + + GD    +V     S      PQV+S P ++ +   V+Y+SG D V+
Sbjct: 61  VPKASARVSQTSLLGDAGKLLVPHKVESVECPTLPQVVSAPISIRKSDCVSYASGIDAVE 120

Query: 340 NDIMHPSPPMSDQFVKAGIAA 402
           NDI + SPP+SDQF KAGIAA
Sbjct: 121 NDIPYSSPPISDQFFKAGIAA 141



 Score =  108 bits (271), Expect(2) = 8e-51
 Identities = 71/208 (34%), Positives = 113/208 (54%), Gaps = 10/208 (4%)
 Frame = +3

Query: 399 SVSFLSDIVSYKIPTSDGSGILSSQQSHVVERVRPLSTIKASNVKALARE---KIDGKSS 569
           +VSFLSD+V+YK+P +DGSGI +S ++ +V+  RP ST+++SNVK + RE   K+  K+S
Sbjct: 141 AVSFLSDLVNYKLPITDGSGI-NSPKNCMVDPTRPQSTVRSSNVKPIRRENCSKVYPKAS 199

Query: 570 SGTEPGTKSKSNVHEAKGCAQNIGSVSGVNHSFQKKASQPAESERQSNFHDQRRTMPQQV 749
                 + S SN    +  ++    + G        A    ++   ++    RR +PQ+ 
Sbjct: 200 PEAAVSS-STSNYDSTRDKSEKSSFIKGSKRVSNTPAGNSVKTCSIASDTCDRRIIPQKS 258

Query: 750 KPNPNRFVPN-------VLPAEGKFVGEVSEDFNRRPKLAKQSSTVSSMARQFTRSGNVV 908
           K   NR   N       V  ++ K+   V+ED+ + P+  K         R+F  +G++V
Sbjct: 259 KGQSNRSTANFNANVQTVQTSDTKYGEYVAEDYRKPPRETKMPVVRVPSTRRFASNGHIV 318

Query: 909 ESVSNILRQLNWSPATEVALGKLNCSMD 992
           E+V++ILRQ+ W PA E AL  LN SMD
Sbjct: 319 ENVAHILRQIRWGPAAEEALANLNYSMD 346


>ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 879

 Score =  117 bits (294), Expect(2) = 1e-45
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 8/206 (3%)
 Frame = +3

Query: 399 SVSFLSDIVSYKIPTSDGSGILSSQQSHVVERVRPLSTIKASNVKALAREK---IDGKSS 569
           +V+F+SD+V+YK+P SDG GIL+  ++++V+  R L  I++SNV+ + +E    +  K  
Sbjct: 144 AVNFISDVVNYKLPLSDGMGILNYSKNYMVDPARALPKIRSSNVQQIKKENFTAVHPKPP 203

Query: 570 SGTEPG-TKSKSNVHEAKGCAQNIGSVSGVNHSFQKKASQPAESERQSNFHDQRRTMPQQ 746
             T PG +K  +N H AKG A       G  H       +   +      +  RR +PQ+
Sbjct: 204 VPTHPGPSKHTNNHHGAKGKADKSNLAKGFKHVASSGTEKSGAAPNIPVNNHDRRALPQR 263

Query: 747 VKPNPNRFVPN----VLPAEGKFVGEVSEDFNRRPKLAKQSSTVSSMARQFTRSGNVVES 914
            + + N FV N    +  +  +  G   E FN+  +     + +    R FT SG+VVE 
Sbjct: 264 TRTHSNHFVANFGSNMQSSNPQMAGPFKESFNKHTRDLNMPAGIVPTKRHFTNSGHVVEV 323

Query: 915 VSNILRQLNWSPATEVALGKLNCSMD 992
           V +IL+QL W PATE  L  LN S+D
Sbjct: 324 VKDILKQLRWGPATEKTLYNLNFSID 349



 Score = 92.8 bits (229), Expect(2) = 1e-45
 Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 15/144 (10%)
 Frame = +1

Query: 16  MLRTKQLG-TLSQSAR-FFLNGSQCNAGDGNSCTCAEDETCISRKQNTKN--VVRDAQAP 183
           MLR KQ+  TLS +AR   L GS+CNA DGNSCTC EDETC+S++Q  KN   +   + P
Sbjct: 1   MLRAKQISSTLSSNARSILLGGSRCNAADGNSCTCPEDETCVSKRQQRKNNEDLLALKPP 60

Query: 184 SALASKTSIKVSSLISGDIVSSPASS-----------PQVISTPSNLGRIATVTYSSGGD 330
           S ++  TS  V +L+SG++ + PAS             QV  T     +  + T +   D
Sbjct: 61  SLVSKATSQVVGTLVSGNLANGPASHKAGSVGQSGRVQQVQPTSYAPSKSDSATSACVVD 120

Query: 331 CVQNDIMHPSPPMSDQFVKAGIAA 402
            VQ+ + H S   +DQF +AGIAA
Sbjct: 121 GVQDHVAHSSSLNADQFYRAGIAA 144