BLASTX nr result

ID: Cnidium21_contig00026178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026178
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532213.1| Vacuolar protein, putative [Ricinus communis...    91   1e-16
ref|XP_002320533.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_003519236.1| PREDICTED: U-box domain-containing protein 3...    79   3e-13
ref|XP_002863316.1| armadillo/beta-catenin repeat family protein...    78   9e-13
ref|XP_002264882.1| PREDICTED: U-box domain-containing protein 4...    77   1e-12

>ref|XP_002532213.1| Vacuolar protein, putative [Ricinus communis]
           gi|223528109|gb|EEF30182.1| Vacuolar protein, putative
           [Ricinus communis]
          Length = 391

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/98 (51%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = +3

Query: 21  TRMGDEVMEEDNTWNKKKQIVIEQVANKVINGQDIYVQIQGARDIRRLVR-NSSAVRARS 197
           T + D   EE+  WN KK+ +I+QV+ ++  G D+  QIQ A+D+R+LVR +SS+ + RS
Sbjct: 21  TNVRDGEEEEEEKWNVKKETLIQQVSERLKKG-DLNTQIQAAKDLRKLVRKSSSSTKTRS 79

Query: 198 NFAASGVIPALVTMLSSLNFEAKEASLVALLNLAARNE 311
            FAA+GVI  LV ML S N +A+ ASL+ALLNLA RN+
Sbjct: 80  KFAAAGVIQPLVFMLFSSNLDARHASLLALLNLAVRNQ 117


>ref|XP_002320533.1| predicted protein [Populus trichocarpa] gi|222861306|gb|EEE98848.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/99 (48%), Positives = 69/99 (69%)
 Frame = +3

Query: 15  ERTRMGDEVMEEDNTWNKKKQIVIEQVANKVINGQDIYVQIQGARDIRRLVRNSSAVRAR 194
           E T +     +E+  WN +KQ  I +++ ++++G D+  QI+ ARDIR+LVR SSA + R
Sbjct: 8   EETTVKVSSNQEEEAWNLRKQTQIVELSERLMSG-DLKTQIEAARDIRKLVRKSSA-KTR 65

Query: 195 SNFAASGVIPALVTMLSSLNFEAKEASLVALLNLAARNE 311
           +  AA+GVI  L+ ML S NF+A+ ASL+ALLNLA RNE
Sbjct: 66  TKLAAAGVIQPLIFMLLSPNFDARHASLLALLNLAVRNE 104


>ref|XP_003519236.1| PREDICTED: U-box domain-containing protein 3-like [Glycine max]
          Length = 381

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/86 (48%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
 Frame = +3

Query: 57  TWNKKKQIVIEQVANKVINGQDIYVQIQGARDIRRLVR-NSSAVRARSNFAASGVIPALV 233
           TW+  K   I  ++ K+ING ++  +I+ AR+IR++VR +SS+ + R+  AA+GVI  LV
Sbjct: 23  TWSLGKHTQIIGLSEKLINGNNLSAKIEAAREIRKMVRKSSSSSKTRAKLAAAGVIEPLV 82

Query: 234 TMLSSLNFEAKEASLVALLNLAARNE 311
            MLSS N +A+++SL+ALLNLA RNE
Sbjct: 83  LMLSSSNLDARQSSLLALLNLAVRNE 108


>ref|XP_002863316.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309150|gb|EFH39575.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
 Frame = +3

Query: 33  DEVMEED--NTWNKKKQIVIEQVANKVINGQDIYVQIQGARDIRRLVRNSSAVR-ARSNF 203
           DE  EE   NTW   K+++I  ++ K+++G D+  +I+ A++IR+L+R S     ARS  
Sbjct: 27  DEAEEETTTNTWKNTKELLILHLSKKLLHG-DLDFRIEAAKEIRKLLRKSPVKSSARSKL 85

Query: 204 AASGVIPALVTMLSSLNFEAKEASLVALLNLAARNE 311
           A +GVIP LV ML S N +A+ ASL+ALLNLA RNE
Sbjct: 86  ADAGVIPPLVPMLISSNVDARHASLLALLNLAVRNE 121


>ref|XP_002264882.1| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 376

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = +3

Query: 24  RMGDEVMEEDNTWNKKKQIVIEQVANKVINGQDIYVQIQGARDIRRLVRNSSAVRARSNF 203
           RMGD   EE   W ++K+ +I+ VA +++NG D+  +IQ A DIR ++RNSS V+ RS F
Sbjct: 9   RMGDS--EEGEIWTQQKRTLIDGVAERLLNG-DLDSKIQAAIDIRNILRNSS-VKTRSKF 64

Query: 204 -AASGVIPALVTMLSSLNFEAKEASLVALLNLAARNE 311
            AA+ VI  LV++L S N  A E SL+ALL LAARNE
Sbjct: 65  TAAADVIQPLVSLLLSPNQHAAEVSLLALLTLAARNE 101


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