BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026175
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like...   129   2e-28
ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit...   125   4e-27
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu...   125   5e-27
ref|NP_192803.4| GTP binding protein [Arabidopsis thaliana] gi|3...   112   4e-23

>ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|222859331|gb|EEE96878.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score =  130 bits (326), Expect = 1e-28
 Identities = 68/125 (54%), Positives = 91/125 (72%), Gaps = 2/125 (1%)
 Frame = -3

Query: 372 VENIGKTIKKVVENKGSSWWYTPHMAAASRAIANRIPLVDIVVQVRDARIPFSSTFKELS 193
           ++ IG+ +KK       S WY+ HMAAAS AIA RIPL D +++VRDARIP SS  + LS
Sbjct: 10  LKEIGEALKKA-----KSGWYSLHMAAASHAIAQRIPLADFILEVRDARIPLSSHCQLLS 64

Query: 192 --VSNSSKHLIVLNKTDLANRSQTKKWTRYLEEQSHVCCEVNSHNKDSIKGFLDLLQSEV 19
               +S + +IV+NKTDLANRSQ K+WT+Y E+Q+ +   VNSHNK+ +K FL+ LQ++V
Sbjct: 65  NFPPSSLRRIIVMNKTDLANRSQLKEWTKYFEQQNCISYGVNSHNKEDVKKFLNFLQAQV 124

Query: 18  RELKR 4
           RELKR
Sbjct: 125 RELKR 129


>ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
           gi|449482814|ref|XP_004156412.1| PREDICTED: ribosome
           biogenesis GTPase A-like [Cucumis sativus]
          Length = 366

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/130 (53%), Positives = 95/130 (73%), Gaps = 2/130 (1%)
 Frame = -3

Query: 387 ASGRLVENIGKTIKKVVE-NKGSSWWYTPHMAAASRAIANRIPLVDIVVQVRDARIPFSS 211
           A+  L+  IG  I ++   N+ SS WY  HM AASRA+A RIPLVD V++VRDARIP SS
Sbjct: 2   AAATLMRKIGTAINQLAAGNRISSGWYDAHMEAASRAVAERIPLVDFVLEVRDARIPTSS 61

Query: 210 TFKEL-SVSNSSKHLIVLNKTDLANRSQTKKWTRYLEEQSHVCCEVNSHNKDSIKGFLDL 34
            ++ + +   SSK +IVLNKTDLA++SQT+ WTR+ E+ + +   VNSHNK++I+ FL+ 
Sbjct: 62  EYEMMKNHPPSSKRIIVLNKTDLADQSQTEVWTRHFEDHNCISYGVNSHNKENIREFLNF 121

Query: 33  LQSEVRELKR 4
           LQ+ VRELK+
Sbjct: 122 LQARVRELKK 131


>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
           gi|297744953|emb|CBI38545.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/125 (50%), Positives = 91/125 (72%), Gaps = 1/125 (0%)
 Frame = -3

Query: 375 LVENIGKTIKKVVENKGSSWWYTPHMAAASRAIANRIPLVDIVVQVRDARIPFSSTFKEL 196
           L + +G  +K+  +      W++PHMAAASRA++ RIPLVD+V++VRDARIP SS + +L
Sbjct: 6   LEKRLGSGVKRAAKT-----WFSPHMAAASRAVSERIPLVDLVLEVRDARIPLSSEYDQL 60

Query: 195 -SVSNSSKHLIVLNKTDLANRSQTKKWTRYLEEQSHVCCEVNSHNKDSIKGFLDLLQSEV 19
            +  +SSK +IVLNK DLANR + K+W RY E+Q+ +   VNSHNKD+IK  L  LQ++V
Sbjct: 61  RNFPSSSKRIIVLNKMDLANRLEIKEWMRYFEQQNCISFGVNSHNKDNIKECLKFLQAQV 120

Query: 18  RELKR 4
           + +K+
Sbjct: 121 KGVKK 125


>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
           gi|223534309|gb|EEF36021.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 373

 Score =  125 bits (313), Expect = 5e-27
 Identities = 66/124 (53%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
 Frame = -3

Query: 375 LVENIGKTIKKVVENKGSSWWYTPHMAAASRAIANRIPLVDIVVQVRDARIPFSSTFKEL 196
           L   IGK + K   N+   W Y PHMAAAS AIA RI LVD V++VRDARIP SS  + L
Sbjct: 2   LASEIGKRVMKASRNREQRW-YNPHMAAASSAIAERISLVDFVIEVRDARIPLSSECQLL 60

Query: 195 SV-SNSSKHLIVLNKTDLANRSQTKKWTRYLEEQSHVCCEVNSHNKDSIKGFLDLLQSEV 19
           +  S+SS+ +IV+NK DLANR Q K W +Y +++  V   +NSHNKD++K FL+ LQ +V
Sbjct: 61  TNHSDSSRRIIVMNKMDLANRLQLKDWIKYFKQRGFVSYAINSHNKDNVKEFLNFLQGQV 120

Query: 18  RELK 7
           R LK
Sbjct: 121 RGLK 124


>ref|NP_192803.4| GTP binding protein [Arabidopsis thaliana]
           gi|3600035|gb|AAC35523.1| contains similarity to
           GTP-binding proteins [Arabidopsis thaliana]
           gi|332657513|gb|AEE82913.1| GTP binding protein
           [Arabidopsis thaliana]
          Length = 377

 Score =  112 bits (279), Expect = 4e-23
 Identities = 61/127 (48%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
 Frame = -3

Query: 378 RLVENIGKTIKKVVENKGSSWWYTPHMAAASRAIANRIPLVDIVVQVRDARIPFSSTFKE 199
           ++   IG  + K   N    W Y PHMAAA RAI+ RIPLVD V+++RDARIP SS ++ 
Sbjct: 8   KIAREIGDAVIKASRNPNRRW-YGPHMAAAVRAISERIPLVDFVLEIRDARIPLSSEYEL 66

Query: 198 LSVSNS--SKHLIVLNKTDLANRSQTKKWTRYLEEQSHVCCEVNSHNKDSIKGFLDLLQS 25
           L   +   SK +IVLNK +LA+  + KK   Y EE++++   VNSHNKD +K  L+ LQS
Sbjct: 67  LRKFSPLPSKRIIVLNKMELADPLELKKCIDYFEERNYLSYAVNSHNKDCVKQLLNFLQS 126

Query: 24  EVRELKR 4
           +VREL +
Sbjct: 127 QVRELHK 133